RNA–Protein interactions for RNA: ENST00000467075.1

RPL11-204, Transcript of ribosomal protein L11, humanhuman

TSL 3

Gene RPL11, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL11-204ENST00000467075 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
RPL11-204ENST00000467075 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
RPL11-204ENST00000467075 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
RPL11-204ENST00000467075 ABCC9O60706 1549 aa25.64■■□□□ 1.7
RPL11-204ENST00000467075 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
RPL11-204ENST00000467075 MYO15BQ96JP2 1530 aa25.37■■□□□ 1.65
RPL11-204ENST00000467075 NACADO15069 1562 aa25.25■■□□□ 1.63
RPL11-204ENST00000467075 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
RPL11-204ENST00000467075 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
RPL11-204ENST00000467075 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
RPL11-204ENST00000467075 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
RPL11-204ENST00000467075 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
RPL11-204ENST00000467075 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
RPL11-204ENST00000467075 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
RPL11-204ENST00000467075 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
RPL11-204ENST00000467075 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
RPL11-204ENST00000467075 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
RPL11-204ENST00000467075 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
RPL11-204ENST00000467075 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
RPL11-204ENST00000467075 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
RPL11-204ENST00000467075 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
RPL11-204ENST00000467075 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
RPL11-204ENST00000467075 WIZO95785 1651 aa23.37■■□□□ 1.33
RPL11-204ENST00000467075 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
RPL11-204ENST00000467075 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
RPL11-204ENST00000467075 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
RPL11-204ENST00000467075 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
RPL11-204ENST00000467075 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
RPL11-204ENST00000467075 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
RPL11-204ENST00000467075 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
RPL11-204ENST00000467075 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
RPL11-204ENST00000467075 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
RPL11-204ENST00000467075 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
RPL11-204ENST00000467075 CFTRP13569 1480 aa22.59■■□□□ 1.21
RPL11-204ENST00000467075 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
RPL11-204ENST00000467075 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
RPL11-204ENST00000467075 NESP48681 1621 aa22.38■■□□□ 1.17
RPL11-204ENST00000467075 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
RPL11-204ENST00000467075 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
RPL11-204ENST00000467075 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
RPL11-204ENST00000467075 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
RPL11-204ENST00000467075 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
RPL11-204ENST00000467075 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
RPL11-204ENST00000467075 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
RPL11-204ENST00000467075 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
RPL11-204ENST00000467075 TOP2BQ02880 1626 aa22.15■■□□□ 1.14
RPL11-204ENST00000467075 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
RPL11-204ENST00000467075 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
RPL11-204ENST00000467075 CUX1P39880 1505 aa22.11■■□□□ 1.13
RPL11-204ENST00000467075 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
RPL11-204ENST00000467075 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
RPL11-204ENST00000467075 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
RPL11-204ENST00000467075 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
RPL11-204ENST00000467075 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
RPL11-204ENST00000467075 WDR62O43379 1518 aa22.02■■□□□ 1.12
RPL11-204ENST00000467075 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
RPL11-204ENST00000467075 FGD5Q6ZNL6 1462 aa21.92■■□□□ 1.1
RPL11-204ENST00000467075 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
RPL11-204ENST00000467075 WDR97A6NE52 1622 aa21.83■■□□□ 1.08
RPL11-204ENST00000467075 ABCA10Q8WWZ4 1543 aa21.79■■□□□ 1.08
RPL11-204ENST00000467075 EEA1Q15075 1411 aa21.79■■□□□ 1.08
RPL11-204ENST00000467075 TARBP1Q13395 1621 aaKnown RBP21.78■■□□□ 1.08
RPL11-204ENST00000467075 CUX2O14529 1486 aa21.76■■□□□ 1.07
RPL11-204ENST00000467075 IFT140Q96RY7 1462 aa21.76■■□□□ 1.07
RPL11-204ENST00000467075 SOGA1O94964 1423 aa21.75■■□□□ 1.07
RPL11-204ENST00000467075 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
RPL11-204ENST00000467075 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
RPL11-204ENST00000467075 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
RPL11-204ENST00000467075 RUSC2Q8N2Y8 1516 aa21.59■■□□□ 1.05
RPL11-204ENST00000467075 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
RPL11-204ENST00000467075 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
RPL11-204ENST00000467075 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
RPL11-204ENST00000467075 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
RPL11-204ENST00000467075 CUL7Q14999 1698 aa21.54■■□□□ 1.04
RPL11-204ENST00000467075 KIF21BO75037 1637 aa21.52■■□□□ 1.04
RPL11-204ENST00000467075 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
RPL11-204ENST00000467075 TDRD9Q8NDG6 1382 aaKnown RBP21.49■■□□□ 1.03
RPL11-204ENST00000467075 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
RPL11-204ENST00000467075 GRIN2BQ13224 1484 aa21.49■■□□□ 1.03
RPL11-204ENST00000467075 IGF1RP08069 1367 aa21.46■■□□□ 1.03
RPL11-204ENST00000467075 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.032e-13■■■■□ 26.7
RPL11-204ENST00000467075 PRXQ9BXM0 1461 aa21.45■■□□□ 1.03
RPL11-204ENST00000467075 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
RPL11-204ENST00000467075 ADAMTS12P58397 1594 aa21.43■■□□□ 1.02
RPL11-204ENST00000467075 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
RPL11-204ENST00000467075 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
RPL11-204ENST00000467075 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
RPL11-204ENST00000467075 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
RPL11-204ENST00000467075 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
RPL11-204ENST00000467075 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
RPL11-204ENST00000467075 SYNJ2O15056 1496 aa21.28■■□□□ 1
RPL11-204ENST00000467075 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
RPL11-204ENST00000467075 CTTNBP2Q8WZ74 1663 aa21.21■□□□□ 0.99
RPL11-204ENST00000467075 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
RPL11-204ENST00000467075 CHD1O14646 1710 aa21.17■□□□□ 0.98
RPL11-204ENST00000467075 LOC105371045A0A1W2PR82 267 aa21.14■□□□□ 0.97
RPL11-204ENST00000467075 NUP160Q12769 1436 aa21.11■□□□□ 0.97
RPL11-204ENST00000467075 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
RPL11-204ENST00000467075 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
RPL11-204ENST00000467075 CEP170Q5SW79 1584 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms