RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
CTSB-225ENST00000532409 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
CTSB-225ENST00000532409 ABCC9O60706 1549 aa33.48■■■□□ 2.95
CTSB-225ENST00000532409 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
CTSB-225ENST00000532409 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
CTSB-225ENST00000532409 NACADO15069 1562 aa31.91■■■□□ 2.7
CTSB-225ENST00000532409 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
CTSB-225ENST00000532409 MYO15BQ96JP2 1530 aa31.6■■■□□ 2.65
CTSB-225ENST00000532409 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
CTSB-225ENST00000532409 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
CTSB-225ENST00000532409 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
CTSB-225ENST00000532409 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
CTSB-225ENST00000532409 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
CTSB-225ENST00000532409 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
CTSB-225ENST00000532409 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
CTSB-225ENST00000532409 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
CTSB-225ENST00000532409 CC2D2AQ9P2K1 1620 aa30.24■■■□□ 2.43
CTSB-225ENST00000532409 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
CTSB-225ENST00000532409 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
CTSB-225ENST00000532409 ATAD2BQ9ULI0 1458 aa29.5■■■□□ 2.31
CTSB-225ENST00000532409 BAZ1AQ9NRL2 1556 aaPredicted RBP29.5■■■□□ 2.31
CTSB-225ENST00000532409 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
CTSB-225ENST00000532409 MROH2BQ7Z745 1585 aa29.4■■■□□ 2.3
CTSB-225ENST00000532409 SMARCA2P51531 1590 aa29.39■■■□□ 2.29
CTSB-225ENST00000532409 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
CTSB-225ENST00000532409 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
CTSB-225ENST00000532409 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
CTSB-225ENST00000532409 WIZO95785 1651 aa29.09■■■□□ 2.25
CTSB-225ENST00000532409 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
CTSB-225ENST00000532409 NESP48681 1621 aa28.94■■■□□ 2.22
CTSB-225ENST00000532409 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
CTSB-225ENST00000532409 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
CTSB-225ENST00000532409 LAMC3Q9Y6N6 1575 aa28.7■■■□□ 2.18
CTSB-225ENST00000532409 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
CTSB-225ENST00000532409 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
CTSB-225ENST00000532409 CUX2O14529 1486 aa28.52■■■□□ 2.16
CTSB-225ENST00000532409 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
CTSB-225ENST00000532409 THOC2Q8NI27 1593 aaKnown RBP28.48■■■□□ 2.15
CTSB-225ENST00000532409 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
CTSB-225ENST00000532409 CFTRP13569 1480 aa28.4■■■□□ 2.14
CTSB-225ENST00000532409 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
CTSB-225ENST00000532409 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
CTSB-225ENST00000532409 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
CTSB-225ENST00000532409 WDR62O43379 1518 aa28.19■■■□□ 2.1
CTSB-225ENST00000532409 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
CTSB-225ENST00000532409 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
CTSB-225ENST00000532409 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.08
CTSB-225ENST00000532409 DNAJC5Q9H3Z4 198 aa27.92■■■□□ 2.06
CTSB-225ENST00000532409 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
CTSB-225ENST00000532409 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
CTSB-225ENST00000532409 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
CTSB-225ENST00000532409 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
CTSB-225ENST00000532409 ZNF608Q9ULD9 1512 aaPredicted RBP27.67■■■□□ 2.02
CTSB-225ENST00000532409 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
CTSB-225ENST00000532409 CUX1P39880 1505 aa27.59■■■□□ 2.01
CTSB-225ENST00000532409 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
CTSB-225ENST00000532409 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
CTSB-225ENST00000532409 FGD5Q6ZNL6 1462 aa27.51■■■□□ 2
CTSB-225ENST00000532409 EIF4G3O43432 1585 aaKnown RBP27.5■■□□□ 1.99
CTSB-225ENST00000532409 SOGA1O94964 1423 aa27.47■■□□□ 1.99
CTSB-225ENST00000532409 AQRO60306 1485 aaKnown RBP eCLIP27.46■■□□□ 1.992e-8■■■■□ 21.3
CTSB-225ENST00000532409 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
CTSB-225ENST00000532409 OSCARQ8IYS5 282 aa27.32■■□□□ 1.96
CTSB-225ENST00000532409 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
CTSB-225ENST00000532409 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
CTSB-225ENST00000532409 WDR97A6NE52 1622 aa27.28■■□□□ 1.96
CTSB-225ENST00000532409 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
CTSB-225ENST00000532409 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
CTSB-225ENST00000532409 CHD1O14646 1710 aa27.21■■□□□ 1.95
CTSB-225ENST00000532409 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
CTSB-225ENST00000532409 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
CTSB-225ENST00000532409 FBLN2P98095 1184 aa27.16■■□□□ 1.94
CTSB-225ENST00000532409 GRIN2BQ13224 1484 aa27.14■■□□□ 1.94
CTSB-225ENST00000532409 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.94
CTSB-225ENST00000532409 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
CTSB-225ENST00000532409 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
CTSB-225ENST00000532409 MAGI1Q96QZ7 1491 aaPredicted RBP27.07■■□□□ 1.92
CTSB-225ENST00000532409 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
CTSB-225ENST00000532409 TRIM41Q8WV44 630 aa27■■□□□ 1.91
CTSB-225ENST00000532409 SYNJ2O15056 1496 aa27■■□□□ 1.91
CTSB-225ENST00000532409 RIMBP3CA6NJZ7 1639 aa26.97■■□□□ 1.91
CTSB-225ENST00000532409 RIMBP3BA6NNM3 1639 aa26.97■■□□□ 1.91
CTSB-225ENST00000532409 RIMBP3Q9UFD9 1639 aa26.97■■□□□ 1.91
CTSB-225ENST00000532409 ARHGEF11O15085 1522 aa26.93■■□□□ 1.9
CTSB-225ENST00000532409 ADAMTS12P58397 1594 aa26.89■■□□□ 1.9
CTSB-225ENST00000532409 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
CTSB-225ENST00000532409 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
CTSB-225ENST00000532409 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
CTSB-225ENST00000532409 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
CTSB-225ENST00000532409 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
CTSB-225ENST00000532409 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
CTSB-225ENST00000532409 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
CTSB-225ENST00000532409 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
CTSB-225ENST00000532409 NUP160Q12769 1436 aa26.7■■□□□ 1.86
CTSB-225ENST00000532409 IGF1RP08069 1367 aa26.68■■□□□ 1.86
CTSB-225ENST00000532409 ERCC6L2Q5T890 1561 aa26.58■■□□□ 1.85
CTSB-225ENST00000532409 CUL7Q14999 1698 aa26.56■■□□□ 1.84
CTSB-225ENST00000532409 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
CTSB-225ENST00000532409 SHROOM2Q13796 1616 aa26.51■■□□□ 1.83
CTSB-225ENST00000532409 CARMIL1Q5VZK9 1371 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms