RNA–Protein interactions for RNA: ENST00000431761.1

CLUHP3-203, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 3

Gene CLUHP3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-203ENST00000431761 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
CLUHP3-203ENST00000431761 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
CLUHP3-203ENST00000431761 ABCC9O60706 1549 aa28.36■■■□□ 2.13
CLUHP3-203ENST00000431761 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
CLUHP3-203ENST00000431761 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
CLUHP3-203ENST00000431761 NACADO15069 1562 aa26.83■■□□□ 1.89
CLUHP3-203ENST00000431761 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
CLUHP3-203ENST00000431761 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
CLUHP3-203ENST00000431761 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
CLUHP3-203ENST00000431761 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
CLUHP3-203ENST00000431761 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
CLUHP3-203ENST00000431761 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.78
CLUHP3-203ENST00000431761 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
CLUHP3-203ENST00000431761 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
CLUHP3-203ENST00000431761 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
CLUHP3-203ENST00000431761 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
CLUHP3-203ENST00000431761 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
CLUHP3-203ENST00000431761 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
CLUHP3-203ENST00000431761 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
CLUHP3-203ENST00000431761 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
CLUHP3-203ENST00000431761 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
CLUHP3-203ENST00000431761 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
CLUHP3-203ENST00000431761 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
CLUHP3-203ENST00000431761 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
CLUHP3-203ENST00000431761 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
CLUHP3-203ENST00000431761 MROH2BQ7Z745 1585 aa24.52■■□□□ 1.52
CLUHP3-203ENST00000431761 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
CLUHP3-203ENST00000431761 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
CLUHP3-203ENST00000431761 NESP48681 1621 aa24.41■■□□□ 1.5
CLUHP3-203ENST00000431761 CUX2O14529 1486 aa24.29■■□□□ 1.48
CLUHP3-203ENST00000431761 WIZO95785 1651 aa24.26■■□□□ 1.47
CLUHP3-203ENST00000431761 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
CLUHP3-203ENST00000431761 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
CLUHP3-203ENST00000431761 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
CLUHP3-203ENST00000431761 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
CLUHP3-203ENST00000431761 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
CLUHP3-203ENST00000431761 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
CLUHP3-203ENST00000431761 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
CLUHP3-203ENST00000431761 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
CLUHP3-203ENST00000431761 MRC2Q9UBG0 1479 aa23.85■■□□□ 1.41
CLUHP3-203ENST00000431761 CFTRP13569 1480 aa23.8■■□□□ 1.4
CLUHP3-203ENST00000431761 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
CLUHP3-203ENST00000431761 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
CLUHP3-203ENST00000431761 WDR62O43379 1518 aa23.75■■□□□ 1.39
CLUHP3-203ENST00000431761 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
CLUHP3-203ENST00000431761 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
CLUHP3-203ENST00000431761 PRDM2Q13029 1718 aa23.57■■□□□ 1.36
CLUHP3-203ENST00000431761 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
CLUHP3-203ENST00000431761 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
CLUHP3-203ENST00000431761 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
CLUHP3-203ENST00000431761 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
CLUHP3-203ENST00000431761 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
CLUHP3-203ENST00000431761 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
CLUHP3-203ENST00000431761 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
CLUHP3-203ENST00000431761 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
CLUHP3-203ENST00000431761 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.29
CLUHP3-203ENST00000431761 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
CLUHP3-203ENST00000431761 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.293e-8■■■□□ 14.9
CLUHP3-203ENST00000431761 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
CLUHP3-203ENST00000431761 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
CLUHP3-203ENST00000431761 SOGA1O94964 1423 aa23.06■■□□□ 1.28
CLUHP3-203ENST00000431761 CUX1P39880 1505 aa23.03■■□□□ 1.28
CLUHP3-203ENST00000431761 FBLN2P98095 1184 aa23.02■■□□□ 1.28
CLUHP3-203ENST00000431761 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
CLUHP3-203ENST00000431761 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
CLUHP3-203ENST00000431761 CHD1O14646 1710 aa22.96■■□□□ 1.27
CLUHP3-203ENST00000431761 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
CLUHP3-203ENST00000431761 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
CLUHP3-203ENST00000431761 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
CLUHP3-203ENST00000431761 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
CLUHP3-203ENST00000431761 SNAPC4Q5SXM2 1469 aa22.87■■□□□ 1.25
CLUHP3-203ENST00000431761 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
CLUHP3-203ENST00000431761 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
CLUHP3-203ENST00000431761 GRIN2BQ13224 1484 aa22.81■■□□□ 1.24
CLUHP3-203ENST00000431761 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
CLUHP3-203ENST00000431761 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
CLUHP3-203ENST00000431761 MAGI1Q96QZ7 1491 aaPredicted RBP22.77■■□□□ 1.24
CLUHP3-203ENST00000431761 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
CLUHP3-203ENST00000431761 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
CLUHP3-203ENST00000431761 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
CLUHP3-203ENST00000431761 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
CLUHP3-203ENST00000431761 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
CLUHP3-203ENST00000431761 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
CLUHP3-203ENST00000431761 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
CLUHP3-203ENST00000431761 BIVM-ERCC5R4GMW8 1640 aa22.67■■□□□ 1.22
CLUHP3-203ENST00000431761 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
CLUHP3-203ENST00000431761 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
CLUHP3-203ENST00000431761 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
CLUHP3-203ENST00000431761 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
CLUHP3-203ENST00000431761 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
CLUHP3-203ENST00000431761 FHAD1B1AJZ9 1412 aa22.47■■□□□ 1.19
CLUHP3-203ENST00000431761 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
CLUHP3-203ENST00000431761 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
CLUHP3-203ENST00000431761 NUP160Q12769 1436 aa22.41■■□□□ 1.18
CLUHP3-203ENST00000431761 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
CLUHP3-203ENST00000431761 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
CLUHP3-203ENST00000431761 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
CLUHP3-203ENST00000431761 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
CLUHP3-203ENST00000431761 IGF1RP08069 1367 aa22.25■■□□□ 1.15
CLUHP3-203ENST00000431761 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms