RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 NISCHQ9Y2I1 1504 aa41.2■■■■■ 4.19
TRIM41-202ENST00000351937 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.31
TRIM41-202ENST00000351937 ZCCHC6Q5VYS8 1495 aaKnown RBP34.66■■■■□ 3.14
TRIM41-202ENST00000351937 DCAF1Q9Y4B6 1507 aa34.08■■■■□ 3.05
TRIM41-202ENST00000351937 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
TRIM41-202ENST00000351937 SHROOM4Q9ULL8 1493 aa33.81■■■■□ 3
TRIM41-202ENST00000351937 ABCC9O60706 1549 aa33.59■■■□□ 2.97
TRIM41-202ENST00000351937 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.97
TRIM41-202ENST00000351937 NACADO15069 1562 aa33.27■■■□□ 2.92
TRIM41-202ENST00000351937 SCRIBQ14160 1630 aa32.94■■■□□ 2.86
TRIM41-202ENST00000351937 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
TRIM41-202ENST00000351937 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
TRIM41-202ENST00000351937 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
TRIM41-202ENST00000351937 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
TRIM41-202ENST00000351937 CECR2Q9BXF3 1484 aa31.99■■■□□ 2.71
TRIM41-202ENST00000351937 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
TRIM41-202ENST00000351937 MROH2BQ7Z745 1585 aa31.84■■■□□ 2.69
TRIM41-202ENST00000351937 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
TRIM41-202ENST00000351937 PABPN1Q86U42 306 aaKnown RBP eCLIP31.76■■■□□ 2.68
TRIM41-202ENST00000351937 SMARCA4P51532 1647 aa31.59■■■□□ 2.65
TRIM41-202ENST00000351937 WIZO95785 1651 aa31.58■■■□□ 2.65
TRIM41-202ENST00000351937 CHIC1Q5VXU3 224 aa31.46■■■□□ 2.63
TRIM41-202ENST00000351937 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
TRIM41-202ENST00000351937 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
TRIM41-202ENST00000351937 ATAD2BQ9ULI0 1458 aa31.03■■■□□ 2.56
TRIM41-202ENST00000351937 SMARCA2P51531 1590 aa31.01■■■□□ 2.55
TRIM41-202ENST00000351937 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
TRIM41-202ENST00000351937 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
TRIM41-202ENST00000351937 BAZ1BQ9UIG0 1483 aaKnown RBP30.87■■■□□ 2.53
TRIM41-202ENST00000351937 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
TRIM41-202ENST00000351937 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
TRIM41-202ENST00000351937 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
TRIM41-202ENST00000351937 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
TRIM41-202ENST00000351937 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
TRIM41-202ENST00000351937 LOC105371045A0A1W2PR82 267 aa30.27■■■□□ 2.44
TRIM41-202ENST00000351937 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.424e-9■■□□□ 14.1
TRIM41-202ENST00000351937 FAM9AQ8IZU1 332 aaPredicted RBP30.17■■■□□ 2.42
TRIM41-202ENST00000351937 CFTRP13569 1480 aa30.12■■■□□ 2.41
TRIM41-202ENST00000351937 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
TRIM41-202ENST00000351937 CADPSQ9ULU8 1353 aa29.97■■■□□ 2.39
TRIM41-202ENST00000351937 EEA1Q15075 1411 aa29.92■■■□□ 2.38
TRIM41-202ENST00000351937 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
TRIM41-202ENST00000351937 SOGA1O94964 1423 aa29.91■■■□□ 2.38
TRIM41-202ENST00000351937 TOP2BQ02880 1626 aa29.9■■■□□ 2.38
TRIM41-202ENST00000351937 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
TRIM41-202ENST00000351937 RUSC2Q8N2Y8 1516 aa29.77■■■□□ 2.36
TRIM41-202ENST00000351937 CSRNP3Q8WYN3 585 aa29.75■■■□□ 2.35
TRIM41-202ENST00000351937 CUX1P39880 1505 aa29.75■■■□□ 2.35
TRIM41-202ENST00000351937 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
TRIM41-202ENST00000351937 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
TRIM41-202ENST00000351937 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
TRIM41-202ENST00000351937 NESP48681 1621 aa29.58■■■□□ 2.33
TRIM41-202ENST00000351937 DNAJC5BQ9UF47 199 aa29.57■■■□□ 2.32
TRIM41-202ENST00000351937 GOLGA3Q08378 1498 aa29.51■■■□□ 2.31
TRIM41-202ENST00000351937 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
TRIM41-202ENST00000351937 TNIKQ9UKE5 1360 aa29.49■■■□□ 2.31
TRIM41-202ENST00000351937 KIF21BO75037 1637 aa29.48■■■□□ 2.31
TRIM41-202ENST00000351937 KIF27Q86VH2 1401 aa29.41■■■□□ 2.3
TRIM41-202ENST00000351937 PDS5BQ9NTI5 1447 aa29.4■■■□□ 2.3
TRIM41-202ENST00000351937 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.3
TRIM41-202ENST00000351937 UBTFP17480 764 aaKnown RBP29.39■■■□□ 2.3
TRIM41-202ENST00000351937 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
TRIM41-202ENST00000351937 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
TRIM41-202ENST00000351937 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
TRIM41-202ENST00000351937 PRXQ9BXM0 1461 aa29.28■■■□□ 2.28
TRIM41-202ENST00000351937 RAPGEF2Q9Y4G8 1499 aa29.28■■■□□ 2.28
TRIM41-202ENST00000351937 CUX2O14529 1486 aa29.26■■■□□ 2.27
TRIM41-202ENST00000351937 ERICH3Q5RHP9 1530 aa29.25■■■□□ 2.27
TRIM41-202ENST00000351937 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
TRIM41-202ENST00000351937 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
TRIM41-202ENST00000351937 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
TRIM41-202ENST00000351937 PCGF6Q9BYE7 350 aa29.18■■■□□ 2.26
TRIM41-202ENST00000351937 ABCA10Q8WWZ4 1543 aa29.14■■■□□ 2.26
TRIM41-202ENST00000351937 IGF1RP08069 1367 aa29.13■■■□□ 2.25
TRIM41-202ENST00000351937 TRIM26Q12899 539 aaPredicted RBP29.13■■■□□ 2.25
TRIM41-202ENST00000351937 RAD54L2Q9Y4B4 1467 aa29.12■■■□□ 2.25
TRIM41-202ENST00000351937 CLIP1P30622 1438 aa29.05■■■□□ 2.24
TRIM41-202ENST00000351937 CARMIL1Q5VZK9 1371 aa28.99■■■□□ 2.23
TRIM41-202ENST00000351937 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
TRIM41-202ENST00000351937 WDR97A6NE52 1622 aa28.97■■■□□ 2.23
TRIM41-202ENST00000351937 ABCA5Q8WWZ7 1642 aa28.86■■■□□ 2.21
TRIM41-202ENST00000351937 TARBP1Q13395 1621 aaKnown RBP28.85■■■□□ 2.21
TRIM41-202ENST00000351937 CUL7Q14999 1698 aa28.84■■■□□ 2.21
TRIM41-202ENST00000351937 VPS8Q8N3P4 1428 aa28.84■■■□□ 2.21
TRIM41-202ENST00000351937 TDRD9Q8NDG6 1382 aaKnown RBP28.82■■■□□ 2.2
TRIM41-202ENST00000351937 WDR62O43379 1518 aa28.82■■■□□ 2.2
TRIM41-202ENST00000351937 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
TRIM41-202ENST00000351937 RANGAP1P46060 587 aaPredicted RBP28.81■■■□□ 2.2
TRIM41-202ENST00000351937 PPARGC1BQ86YN6 1023 aaKnown RBP28.81■■■□□ 2.2
TRIM41-202ENST00000351937 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
TRIM41-202ENST00000351937 HRCP23327 699 aa28.73■■■□□ 2.19
TRIM41-202ENST00000351937 ARAP1Q96P48 1450 aa28.71■■■□□ 2.19
TRIM41-202ENST00000351937 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
TRIM41-202ENST00000351937 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
TRIM41-202ENST00000351937 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
TRIM41-202ENST00000351937 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.175e-7■■■■□ 25.2
TRIM41-202ENST00000351937 APLP2Q06481 763 aa28.59■■■□□ 2.17
TRIM41-202ENST00000351937 PBRM1Q86U86 1689 aa28.58■■■□□ 2.16
TRIM41-202ENST00000351937 GRIN2BQ13224 1484 aa28.54■■■□□ 2.16
TRIM41-202ENST00000351937 CTTNBP2Q8WZ74 1663 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms