Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 USP5-206ENST00000542087 438 ntTSL 313.52□□□□□ -0.258e-6■■□□□ 12.7
RPS3P23396 PSMC5-216ENST00000584320 804 ntTSL 513.34□□□□□ -0.274e-8■■□□□ 12.7
RPS3P23396 CDK9-204ENST00000491521 510 ntTSL 313.32□□□□□ -0.288e-6■■□□□ 12.7
RPS3P23396 RNF10-216ENST00000542438 562 ntTSL 413.31□□□□□ -0.284e-8■■□□□ 12.7
RPS3P23396 AMFR-202ENST00000492830 2249 ntTSL 213.24□□□□□ -0.292e-10■■□□□ 12.7
RPS3P23396 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.38e-6■■□□□ 12.7
RPS3P23396 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.318e-6■■□□□ 12.7
RPS3P23396 SSR1-208ENST00000483409 570 ntTSL 413.06□□□□□ -0.322e-20■■□□□ 12.7
RPS3P23396 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.01□□□□□ -0.334e-8■■□□□ 12.7
RPS3P23396 AMFR-210ENST00000568325 1230 ntTSL 212.92□□□□□ -0.342e-10■■□□□ 12.7
RPS3P23396 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC12.88□□□□□ -0.358e-6■■□□□ 12.7
RPS3P23396 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.364e-8■■□□□ 12.7
RPS3P23396 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.378e-6■■□□□ 12.7
RPS3P23396 BCOR-208ENST00000413905 1945 ntTSL 512.69□□□□□ -0.388e-6■■□□□ 12.7
RPS3P23396 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.56□□□□□ -0.48e-6■■□□□ 12.7
RPS3P23396 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC12.47□□□□□ -0.418e-6■■□□□ 12.7
RPS3P23396 PSMC5-205ENST00000579147 2586 ntTSL 211.98□□□□□ -0.494e-8■■□□□ 12.7
RPS3P23396 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC11.96□□□□□ -0.498e-6■■□□□ 12.7
RPS3P23396 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.538e-6■■□□□ 12.7
RPS3P23396 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC11.7□□□□□ -0.544e-8■■□□□ 12.7
RPS3P23396 GOLGA2-205ENST00000462089 766 ntTSL 311.52□□□□□ -0.578e-6■■□□□ 12.7
RPS3P23396 PSMC5-207ENST00000580063 562 ntTSL 211.4□□□□□ -0.584e-8■■□□□ 12.7
RPS3P23396 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.68e-6■■□□□ 12.7
RPS3P23396 RTL8C-203ENST00000495563 578 ntTSL 511.27□□□□□ -0.614e-8■■□□□ 12.7
RPS3P23396 BCOR-204ENST00000378463 2230 ntTSL 5 BASIC11.12□□□□□ -0.638e-6■■□□□ 12.7
RPS3P23396 CDK9-205ENST00000498339 458 ntTSL 210.92□□□□□ -0.668e-6■■□□□ 12.7
RPS3P23396 BCOR-210ENST00000442018 2189 ntTSL 210.72□□□□□ -0.698e-6■■□□□ 12.7
RPS3P23396 CDC25C-209ENST00000514555 1332 ntTSL 5 BASIC10.5□□□□□ -0.738e-6■■□□□ 12.7
RPS3P23396 RTL8C-202ENST00000464369 616 ntTSL 510.09□□□□□ -0.794e-8■■□□□ 12.7
RPS3P23396 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.88e-6■■□□□ 12.7
RPS3P23396 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.818e-6■■□□□ 12.7
RPS3P23396 CCNK-204ENST00000555049 1606 ntTSL 1 (best) BASIC9.84□□□□□ -0.838e-6■■□□□ 12.7
RPS3P23396 COA4-204ENST00000541455 1038 ntTSL 5 BASIC9.82□□□□□ -0.848e-6■■□□□ 12.7
RPS3P23396 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.848e-6■■□□□ 12.7
RPS3P23396 PSMC5-204ENST00000579031 772 ntTSL 29.8□□□□□ -0.844e-8■■□□□ 12.7
RPS3P23396 PSMC5-221ENST00000585242 1178 ntTSL 59.73□□□□□ -0.854e-8■■□□□ 12.7
RPS3P23396 TAX1BP1-210ENST00000488564 4020 ntTSL 59.66□□□□□ -0.868e-6■■□□□ 12.7
RPS3P23396 GOLGA2-211ENST00000496221 450 ntTSL 39.49□□□□□ -0.898e-6■■□□□ 12.7
RPS3P23396 SRPRA-207ENST00000532268 829 ntTSL 29.41□□□□□ -0.94e-8■■□□□ 12.7
RPS3P23396 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.918e-6■■□□□ 12.7
RPS3P23396 CLINT1-205ENST00000522381 721 ntTSL 59.1□□□□□ -0.958e-6■■□□□ 12.7
RPS3P23396 CCNK-203ENST00000553865 5627 ntTSL 1 (best)8.84□□□□□ -0.998e-6■■□□□ 12.7
RPS3P23396 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.028e-6■■□□□ 12.7
RPS3P23396 HERC4-214ENST00000513996 944 ntTSL 38.45□□□□□ -1.068e-6■■□□□ 12.7
RPS3P23396 BCOR-209ENST00000427012 1969 ntTSL 58.44□□□□□ -1.068e-6■■□□□ 12.7
RPS3P23396 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.078e-6■■□□□ 12.7
RPS3P23396 HERC4-203ENST00000395185 625 ntTSL 48.37□□□□□ -1.078e-6■■□□□ 12.7
RPS3P23396 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.02□□□□□ -1.132e-20■■□□□ 12.7
RPS3P23396 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC8.01□□□□□ -1.138e-6■■□□□ 12.7
RPS3P23396 CLINT1-203ENST00000521047 733 ntTSL 27.57□□□□□ -1.28e-6■■□□□ 12.7
RPS3P23396 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.218e-6■■□□□ 12.7
RPS3P23396 KDM3A-210ENST00000470160 2955 ntTSL 27.05□□□□□ -1.288e-6■■□□□ 12.7
RPS3P23396 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.288e-6■■□□□ 12.7
RPS3P23396 CDC25C-204ENST00000503022 1059 ntTSL 36.87□□□□□ -1.318e-6■■□□□ 12.7
RPS3P23396 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.81□□□□□ -1.328e-6■■□□□ 12.7
RPS3P23396 HDAC1-204ENST00000471488 726 ntTSL 56.35□□□□□ -1.392e-10■■□□□ 12.7
RPS3P23396 HERC4-209ENST00000473533 3593 ntTSL 1 (best)6.01□□□□□ -1.458e-6■■□□□ 12.7
RPS3P23396 UBR5-205ENST00000519365 602 ntTSL 35.73□□□□□ -1.492e-10■■□□□ 12.7
RPS3P23396 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.518e-6■■□□□ 12.7
RPS3P23396 CLINT1-208ENST00000524306 2905 ntTSL 1 (best)5.44□□□□□ -1.548e-6■■□□□ 12.7
RPS3P23396 KDM3A-214ENST00000491383 4485 ntTSL 1 (best)5.12□□□□□ -1.598e-6■■□□□ 12.7
RPS3P23396 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.06□□□□□ -1.68e-6■■□□□ 12.7
RPS3P23396 CLINT1-202ENST00000518855 3394 ntTSL 25.04□□□□□ -1.68e-6■■□□□ 12.7
RPS3P23396 TAX1BP1-204ENST00000416801 2221 ntTSL 25.03□□□□□ -1.68e-6■■□□□ 12.7
RPS3P23396 TAX1BP1-208ENST00000457186 1174 ntTSL 54.87□□□□□ -1.638e-6■■□□□ 12.7
RPS3P23396 UBR5-208ENST00000520898 582 ntTSL 34.77□□□□□ -1.652e-10■■□□□ 12.7
RPS3P23396 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.78e-6■■□□□ 12.7
RPS3P23396 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.78e-6■■□□□ 12.7
RPS3P23396 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.828e-6■■□□□ 12.7
RPS3P23396 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.838e-6■■□□□ 12.7
RPS3P23396 AIMP1-204ENST00000510207 568 ntTSL 42.74□□□□□ -1.978e-6■■□□□ 12.7
RPS3P23396 LBR-208ENST00000488632 425 ntTSL 32.27□□□□□ -2.051e-8■■□□□ 12.7
RPS3P23396 SSR1-209ENST00000488834 585 ntTSL 42.27□□□□□ -2.052e-20■■□□□ 12.7
RPS3P23396 GPAA1-205ENST00000525308 903 ntTSL 217.74■□□□□ 0.432e-10■■□□□ 12.7
RPS3P23396 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.152e-10■■□□□ 12.7
RPS3P23396 NPC1-205ENST00000587163 431 ntTSL 215.48■□□□□ 0.072e-10■■□□□ 12.7
RPS3P23396 GPAA1-206ENST00000526233 489 ntTSL 513.84□□□□□ -0.192e-10■■□□□ 12.7
RPS3P23396 GPAA1-208ENST00000527144 767 ntTSL 313.63□□□□□ -0.232e-10■■□□□ 12.7
RPS3P23396 SPTAN1-211ENST00000625980 1713 ntTSL 212.76□□□□□ -0.374e-10■■□□□ 12.7
RPS3P23396 SPTAN1-229ENST00000636010 1472 ntTSL 511.26□□□□□ -0.614e-10■■□□□ 12.7
RPS3P23396 ERO1A-205ENST00000555069 846 ntTSL 211.01□□□□□ -0.652e-7■■□□□ 12.7
RPS3P23396 SPTAN1-220ENST00000630147 785 ntTSL 29.84□□□□□ -0.834e-10■■□□□ 12.7
RPS3P23396 SPTAN1-221ENST00000630763 1503 ntTSL 29.36□□□□□ -0.914e-10■■□□□ 12.7
RPS3P23396 SLC2A3-202ENST00000469295 1030 ntTSL 26.21□□□□□ -1.425e-20■■□□□ 12.7
RPS3P23396 MIR6891-201ENST00000618788 93 ntBASIC4.43□□□□□ -1.72e-10■■□□□ 12.7
RPS3P23396 ERO1A-202ENST00000553714 672 ntTSL 23.31□□□□□ -1.882e-7■■□□□ 12.7
RPS3P23396 ERO1A-208ENST00000556358 951 ntTSL 21.68□□□□□ -2.142e-7■■□□□ 12.7
RPS3P23396 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.89■■□□□ 1.731e-8■■□□□ 12.7
RPS3P23396 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.931e-8■■□□□ 12.7
RPS3P23396 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.73■□□□□ 0.911e-8■■□□□ 12.7
RPS3P23396 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.661e-8■■□□□ 12.7
RPS3P23396 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.271e-8■■□□□ 12.7
RPS3P23396 APP-210ENST00000448850 1846 ntTSL 1 (best)14.42□□□□□ -0.14e-8■■□□□ 12.7
RPS3P23396 AKR1A1-209ENST00000481885 516 ntTSL 315.66■□□□□ 0.11e-6■■□□□ 12.7
RPS3P23396 EEF1A1-208ENST00000491404 633 ntTSL 33.48□□□□□ -1.854e-17■■□□□ 12.7
RPS3P23396 AURKB-205ENST00000578753 467 ntTSL 28.99□□□□□ -0.972e-10■■□□□ 12.7
RPS3P23396 ANAPC16-203ENST00000478193 734 ntTSL 212.85□□□□□ -0.358e-6■■□□□ 12.7
RPS3P23396 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.688e-6■■□□□ 12.7
RPS3P23396 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.688e-6■■□□□ 12.7
RPS3P23396 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC9.4□□□□□ -0.98e-6■■□□□ 12.7
Retrieved 100 of 24,271 protein–RNA pairs in 189 ms