RNA–Protein interactions for RNA: ENST00000630763.1

SPTAN1-221, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,503 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-221ENST00000630763 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
SPTAN1-221ENST00000630763 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
SPTAN1-221ENST00000630763 ABCC9O60706 1549 aa20.24■□□□□ 0.83
SPTAN1-221ENST00000630763 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
SPTAN1-221ENST00000630763 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
SPTAN1-221ENST00000630763 NACADO15069 1562 aa19.44■□□□□ 0.7
SPTAN1-221ENST00000630763 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
SPTAN1-221ENST00000630763 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
SPTAN1-221ENST00000630763 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
SPTAN1-221ENST00000630763 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
SPTAN1-221ENST00000630763 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
SPTAN1-221ENST00000630763 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
SPTAN1-221ENST00000630763 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
SPTAN1-221ENST00000630763 SCRIBQ14160 1630 aa18.71■□□□□ 0.59
SPTAN1-221ENST00000630763 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
SPTAN1-221ENST00000630763 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
SPTAN1-221ENST00000630763 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
SPTAN1-221ENST00000630763 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
SPTAN1-221ENST00000630763 NCAPD3P42695 1498 aa18■□□□□ 0.47
SPTAN1-221ENST00000630763 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
SPTAN1-221ENST00000630763 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
SPTAN1-221ENST00000630763 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SPTAN1-221ENST00000630763 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
SPTAN1-221ENST00000630763 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
SPTAN1-221ENST00000630763 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
SPTAN1-221ENST00000630763 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
SPTAN1-221ENST00000630763 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
SPTAN1-221ENST00000630763 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
SPTAN1-221ENST00000630763 WIZO95785 1651 aa17.59■□□□□ 0.41
SPTAN1-221ENST00000630763 NESP48681 1621 aa17.48■□□□□ 0.39
SPTAN1-221ENST00000630763 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
SPTAN1-221ENST00000630763 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.38
SPTAN1-221ENST00000630763 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
SPTAN1-221ENST00000630763 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
SPTAN1-221ENST00000630763 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
SPTAN1-221ENST00000630763 CUX2O14529 1486 aa17.34■□□□□ 0.37
SPTAN1-221ENST00000630763 CFTRP13569 1480 aa17.32■□□□□ 0.36
SPTAN1-221ENST00000630763 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
SPTAN1-221ENST00000630763 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
SPTAN1-221ENST00000630763 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
SPTAN1-221ENST00000630763 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
SPTAN1-221ENST00000630763 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
SPTAN1-221ENST00000630763 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
SPTAN1-221ENST00000630763 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
SPTAN1-221ENST00000630763 WDR62O43379 1518 aa17.09■□□□□ 0.33
SPTAN1-221ENST00000630763 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
SPTAN1-221ENST00000630763 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
SPTAN1-221ENST00000630763 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
SPTAN1-221ENST00000630763 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
SPTAN1-221ENST00000630763 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
SPTAN1-221ENST00000630763 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
SPTAN1-221ENST00000630763 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
SPTAN1-221ENST00000630763 SOGA1O94964 1423 aa16.76■□□□□ 0.27
SPTAN1-221ENST00000630763 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
SPTAN1-221ENST00000630763 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
SPTAN1-221ENST00000630763 CUX1P39880 1505 aa16.73■□□□□ 0.27
SPTAN1-221ENST00000630763 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
SPTAN1-221ENST00000630763 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
SPTAN1-221ENST00000630763 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
SPTAN1-221ENST00000630763 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
SPTAN1-221ENST00000630763 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
SPTAN1-221ENST00000630763 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
SPTAN1-221ENST00000630763 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.26
SPTAN1-221ENST00000630763 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
SPTAN1-221ENST00000630763 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
SPTAN1-221ENST00000630763 EIF4G3O43432 1585 aaKnown RBP16.59■□□□□ 0.25
SPTAN1-221ENST00000630763 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
SPTAN1-221ENST00000630763 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
SPTAN1-221ENST00000630763 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
SPTAN1-221ENST00000630763 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
SPTAN1-221ENST00000630763 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
SPTAN1-221ENST00000630763 FBLN2P98095 1184 aa16.52■□□□□ 0.24
SPTAN1-221ENST00000630763 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
SPTAN1-221ENST00000630763 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
SPTAN1-221ENST00000630763 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
SPTAN1-221ENST00000630763 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
SPTAN1-221ENST00000630763 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
SPTAN1-221ENST00000630763 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
SPTAN1-221ENST00000630763 CHD1O14646 1710 aa16.36■□□□□ 0.21
SPTAN1-221ENST00000630763 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
SPTAN1-221ENST00000630763 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
SPTAN1-221ENST00000630763 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
SPTAN1-221ENST00000630763 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
SPTAN1-221ENST00000630763 IGF1RP08069 1367 aa16.32■□□□□ 0.2
SPTAN1-221ENST00000630763 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
SPTAN1-221ENST00000630763 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
SPTAN1-221ENST00000630763 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
SPTAN1-221ENST00000630763 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
SPTAN1-221ENST00000630763 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
SPTAN1-221ENST00000630763 RIMBP3CA6NJZ7 1639 aa16.26■□□□□ 0.19
SPTAN1-221ENST00000630763 RIMBP3BA6NNM3 1639 aa16.26■□□□□ 0.19
SPTAN1-221ENST00000630763 RIMBP3Q9UFD9 1639 aa16.26■□□□□ 0.19
SPTAN1-221ENST00000630763 NUP160Q12769 1436 aa16.26■□□□□ 0.19
SPTAN1-221ENST00000630763 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
SPTAN1-221ENST00000630763 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
SPTAN1-221ENST00000630763 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
SPTAN1-221ENST00000630763 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
SPTAN1-221ENST00000630763 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
SPTAN1-221ENST00000630763 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
SPTAN1-221ENST00000630763 CUL7Q14999 1698 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms