RNA–Protein interactions for RNA: ENST00000542087.1

USP5-206, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 3

Gene USP5, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-206ENST00000542087 NISCHQ9Y2I1 1504 aa35.98■■■■□ 3.35
USP5-206ENST00000542087 ABCC9O60706 1549 aa32.41■■■□□ 2.78
USP5-206ENST00000542087 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
USP5-206ENST00000542087 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
USP5-206ENST00000542087 NACADO15069 1562 aa30.6■■■□□ 2.49
USP5-206ENST00000542087 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
USP5-206ENST00000542087 DCAF8L2P0C7V8 631 aa30.29■■■□□ 2.44
USP5-206ENST00000542087 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
USP5-206ENST00000542087 MYO15BQ96JP2 1530 aa30.15■■■□□ 2.42
USP5-206ENST00000542087 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
USP5-206ENST00000542087 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
USP5-206ENST00000542087 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
USP5-206ENST00000542087 DCAF1Q9Y4B6 1507 aa29.72■■■□□ 2.35
USP5-206ENST00000542087 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
USP5-206ENST00000542087 SCRIBQ14160 1630 aa29.46■■■□□ 2.31
USP5-206ENST00000542087 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
USP5-206ENST00000542087 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
USP5-206ENST00000542087 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
USP5-206ENST00000542087 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
USP5-206ENST00000542087 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.09
USP5-206ENST00000542087 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
USP5-206ENST00000542087 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
USP5-206ENST00000542087 SMARCA2P51531 1590 aa28.06■■■□□ 2.08
USP5-206ENST00000542087 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
USP5-206ENST00000542087 CUX2O14529 1486 aa28.01■■■□□ 2.07
USP5-206ENST00000542087 ERCC6Q03468 1493 aa27.99■■■□□ 2.07
USP5-206ENST00000542087 BAZ1AQ9NRL2 1556 aaPredicted RBP27.93■■■□□ 2.06
USP5-206ENST00000542087 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
USP5-206ENST00000542087 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
USP5-206ENST00000542087 NESP48681 1621 aa27.82■■■□□ 2.04
USP5-206ENST00000542087 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
USP5-206ENST00000542087 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
USP5-206ENST00000542087 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
USP5-206ENST00000542087 KIF21AQ7Z4S6 1674 aa27.51■■□□□ 1.99
USP5-206ENST00000542087 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
USP5-206ENST00000542087 WIZO95785 1651 aa27.39■■□□□ 1.97
USP5-206ENST00000542087 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
USP5-206ENST00000542087 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
USP5-206ENST00000542087 WDR62O43379 1518 aa27.2■■□□□ 1.94
USP5-206ENST00000542087 CEP164Q9UPV0 1460 aa27.11■■□□□ 1.93
USP5-206ENST00000542087 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
USP5-206ENST00000542087 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
USP5-206ENST00000542087 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
USP5-206ENST00000542087 CFTRP13569 1480 aa27.04■■□□□ 1.92
USP5-206ENST00000542087 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
USP5-206ENST00000542087 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
USP5-206ENST00000542087 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
USP5-206ENST00000542087 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
USP5-206ENST00000542087 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
USP5-206ENST00000542087 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
USP5-206ENST00000542087 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
USP5-206ENST00000542087 ZNF608Q9ULD9 1512 aaPredicted RBP26.54■■□□□ 1.84
USP5-206ENST00000542087 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
USP5-206ENST00000542087 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
USP5-206ENST00000542087 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
USP5-206ENST00000542087 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.81
USP5-206ENST00000542087 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.81
USP5-206ENST00000542087 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.81
USP5-206ENST00000542087 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
USP5-206ENST00000542087 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
USP5-206ENST00000542087 POLA1P09884 1462 aaPredicted RBP26.27■■□□□ 1.8
USP5-206ENST00000542087 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.79
USP5-206ENST00000542087 CHD1O14646 1710 aa26.25■■□□□ 1.79
USP5-206ENST00000542087 RAD54L2Q9Y4B4 1467 aa26.16■■□□□ 1.78
USP5-206ENST00000542087 SOGA1O94964 1423 aa26.11■■□□□ 1.77
USP5-206ENST00000542087 WDR97A6NE52 1622 aa26.08■■□□□ 1.77
USP5-206ENST00000542087 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.77
USP5-206ENST00000542087 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
USP5-206ENST00000542087 CUX1P39880 1505 aa26.06■■□□□ 1.76
USP5-206ENST00000542087 FBLN2P98095 1184 aa26.05■■□□□ 1.76
USP5-206ENST00000542087 CYB5RLQ6IPT4 315 aa26.02■■□□□ 1.76
USP5-206ENST00000542087 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
USP5-206ENST00000542087 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
USP5-206ENST00000542087 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
USP5-206ENST00000542087 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
USP5-206ENST00000542087 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
USP5-206ENST00000542087 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
USP5-206ENST00000542087 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
USP5-206ENST00000542087 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
USP5-206ENST00000542087 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
USP5-206ENST00000542087 GAPVD1Q14C86 1478 aa25.81■■□□□ 1.72
USP5-206ENST00000542087 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
USP5-206ENST00000542087 ABCA5Q8WWZ7 1642 aa25.79■■□□□ 1.72
USP5-206ENST00000542087 TRHP20396 242 aaPredicted RBP25.75■■□□□ 1.71
USP5-206ENST00000542087 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
USP5-206ENST00000542087 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
USP5-206ENST00000542087 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
USP5-206ENST00000542087 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
USP5-206ENST00000542087 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
USP5-206ENST00000542087 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
USP5-206ENST00000542087 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
USP5-206ENST00000542087 NUP160Q12769 1436 aa25.52■■□□□ 1.68
USP5-206ENST00000542087 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
USP5-206ENST00000542087 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
USP5-206ENST00000542087 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
USP5-206ENST00000542087 SHROOM2Q13796 1616 aa25.45■■□□□ 1.66
USP5-206ENST00000542087 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
USP5-206ENST00000542087 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
USP5-206ENST00000542087 JPH4Q96JJ6 628 aa25.2■■□□□ 1.62
USP5-206ENST00000542087 KIF13AQ9H1H9 1805 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms