RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
CLINT1-201ENST00000411809 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
CLINT1-201ENST00000411809 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.4
CLINT1-201ENST00000411809 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
CLINT1-201ENST00000411809 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
CLINT1-201ENST00000411809 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
CLINT1-201ENST00000411809 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
CLINT1-201ENST00000411809 ABCC9O60706 1549 aa22.47■■□□□ 1.19
CLINT1-201ENST00000411809 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
CLINT1-201ENST00000411809 NACADO15069 1562 aa22.36■■□□□ 1.17
CLINT1-201ENST00000411809 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
CLINT1-201ENST00000411809 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
CLINT1-201ENST00000411809 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
CLINT1-201ENST00000411809 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
CLINT1-201ENST00000411809 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
CLINT1-201ENST00000411809 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
CLINT1-201ENST00000411809 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
CLINT1-201ENST00000411809 WIZO95785 1651 aa21.68■■□□□ 1.06
CLINT1-201ENST00000411809 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
CLINT1-201ENST00000411809 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
CLINT1-201ENST00000411809 HRCP23327 699 aa21.55■■□□□ 1.04
CLINT1-201ENST00000411809 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
CLINT1-201ENST00000411809 BICRAQ9NZM4 1560 aa21.52■■□□□ 1.04
CLINT1-201ENST00000411809 PCGF6Q9BYE7 350 aa21.51■■□□□ 1.03
CLINT1-201ENST00000411809 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
CLINT1-201ENST00000411809 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.02
CLINT1-201ENST00000411809 PEG3Q9GZU2 1588 aa21.33■■□□□ 1.01
CLINT1-201ENST00000411809 SMARCA2P51531 1590 aa21.29■■□□□ 1
CLINT1-201ENST00000411809 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
CLINT1-201ENST00000411809 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
CLINT1-201ENST00000411809 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
CLINT1-201ENST00000411809 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
CLINT1-201ENST00000411809 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
CLINT1-201ENST00000411809 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
CLINT1-201ENST00000411809 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLINT1-201ENST00000411809 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
CLINT1-201ENST00000411809 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
CLINT1-201ENST00000411809 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
CLINT1-201ENST00000411809 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
CLINT1-201ENST00000411809 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
CLINT1-201ENST00000411809 EEA1Q15075 1411 aa20.66■□□□□ 0.9
CLINT1-201ENST00000411809 SOGA1O94964 1423 aa20.65■□□□□ 0.9
CLINT1-201ENST00000411809 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
CLINT1-201ENST00000411809 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
CLINT1-201ENST00000411809 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
CLINT1-201ENST00000411809 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
CLINT1-201ENST00000411809 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
CLINT1-201ENST00000411809 KIF21BO75037 1637 aa20.55■□□□□ 0.88
CLINT1-201ENST00000411809 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
CLINT1-201ENST00000411809 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
CLINT1-201ENST00000411809 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
CLINT1-201ENST00000411809 GOLGA3Q08378 1498 aa20.42■□□□□ 0.86
CLINT1-201ENST00000411809 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
CLINT1-201ENST00000411809 CFTRP13569 1480 aa20.37■□□□□ 0.85
CLINT1-201ENST00000411809 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
CLINT1-201ENST00000411809 CUX1P39880 1505 aa20.33■□□□□ 0.84
CLINT1-201ENST00000411809 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
CLINT1-201ENST00000411809 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
CLINT1-201ENST00000411809 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
CLINT1-201ENST00000411809 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
CLINT1-201ENST00000411809 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
CLINT1-201ENST00000411809 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
CLINT1-201ENST00000411809 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
CLINT1-201ENST00000411809 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.82
CLINT1-201ENST00000411809 CLIP1P30622 1438 aa20.06■□□□□ 0.8
CLINT1-201ENST00000411809 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
CLINT1-201ENST00000411809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
CLINT1-201ENST00000411809 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
CLINT1-201ENST00000411809 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
CLINT1-201ENST00000411809 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
CLINT1-201ENST00000411809 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
CLINT1-201ENST00000411809 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
CLINT1-201ENST00000411809 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
CLINT1-201ENST00000411809 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
CLINT1-201ENST00000411809 DNMBPQ6XZF7 1577 aa19.89■□□□□ 0.77
CLINT1-201ENST00000411809 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
CLINT1-201ENST00000411809 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
CLINT1-201ENST00000411809 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
CLINT1-201ENST00000411809 IGF1RP08069 1367 aa19.84■□□□□ 0.77
CLINT1-201ENST00000411809 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
CLINT1-201ENST00000411809 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
CLINT1-201ENST00000411809 CUX2O14529 1486 aa19.8■□□□□ 0.76
CLINT1-201ENST00000411809 GTF3C3Q9Y5Q9 886 aa19.8■□□□□ 0.76
CLINT1-201ENST00000411809 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
CLINT1-201ENST00000411809 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
CLINT1-201ENST00000411809 DIEXFQ68CQ4 756 aaKnown RBP19.76■□□□□ 0.75
CLINT1-201ENST00000411809 NESP48681 1621 aa19.75■□□□□ 0.75
CLINT1-201ENST00000411809 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
CLINT1-201ENST00000411809 CUL7Q14999 1698 aa19.72■□□□□ 0.75
CLINT1-201ENST00000411809 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
CLINT1-201ENST00000411809 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
CLINT1-201ENST00000411809 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
CLINT1-201ENST00000411809 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
CLINT1-201ENST00000411809 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
CLINT1-201ENST00000411809 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
CLINT1-201ENST00000411809 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
CLINT1-201ENST00000411809 CFAP43Q8NDM7 1665 aa19.65■□□□□ 0.74
CLINT1-201ENST00000411809 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
CLINT1-201ENST00000411809 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
CLINT1-201ENST00000411809 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms