RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
NPC1-205ENST00000587163 ABCC9O60706 1549 aa37.45■■■■□ 3.59
NPC1-205ENST00000587163 CCDC180Q9P1Z9 1646 aa37.13■■■■□ 3.53
NPC1-205ENST00000587163 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
NPC1-205ENST00000587163 DNAJC5BQ9UF47 199 aa35.42■■■■□ 3.26
NPC1-205ENST00000587163 NACADO15069 1562 aa35.18■■■■□ 3.22
NPC1-205ENST00000587163 DCAF8L2P0C7V8 631 aa35.05■■■■□ 3.2
NPC1-205ENST00000587163 PABPN1Q86U42 306 aaKnown RBP eCLIP34.87■■■■□ 3.17
NPC1-205ENST00000587163 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
NPC1-205ENST00000587163 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
NPC1-205ENST00000587163 BICRAQ9NZM4 1560 aa34.52■■■■□ 3.12
NPC1-205ENST00000587163 ZCCHC6Q5VYS8 1495 aaKnown RBP34.2■■■■□ 3.06
NPC1-205ENST00000587163 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
NPC1-205ENST00000587163 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
NPC1-205ENST00000587163 SCRIBQ14160 1630 aa33.88■■■■□ 3.01
NPC1-205ENST00000587163 CC2D2AQ9P2K1 1620 aa33.79■■■■□ 3
NPC1-205ENST00000587163 CECR2Q9BXF3 1484 aa33.73■■■□□ 2.99
NPC1-205ENST00000587163 EIF4G1Q04637 1599 aaKnown RBP33.65■■■□□ 2.98
NPC1-205ENST00000587163 DNAJC5Q9H3Z4 198 aa32.62■■■□□ 2.81
NPC1-205ENST00000587163 NCAPD3P42695 1498 aa32.52■■■□□ 2.8
NPC1-205ENST00000587163 ATAD2BQ9ULI0 1458 aa32.4■■■□□ 2.78
NPC1-205ENST00000587163 CUX2O14529 1486 aa32.29■■■□□ 2.76
NPC1-205ENST00000587163 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
NPC1-205ENST00000587163 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
NPC1-205ENST00000587163 SMARCA2P51531 1590 aa32.24■■■□□ 2.75
NPC1-205ENST00000587163 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
NPC1-205ENST00000587163 NESP48681 1621 aa32.13■■■□□ 2.73
NPC1-205ENST00000587163 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
NPC1-205ENST00000587163 BAZ1BQ9UIG0 1483 aaKnown RBP32.04■■■□□ 2.72
NPC1-205ENST00000587163 PEG3Q9GZU2 1588 aa31.96■■■□□ 2.71
NPC1-205ENST00000587163 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
NPC1-205ENST00000587163 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
NPC1-205ENST00000587163 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
NPC1-205ENST00000587163 KIF21AQ7Z4S6 1674 aa31.66■■■□□ 2.66
NPC1-205ENST00000587163 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
NPC1-205ENST00000587163 CADPSQ9ULU8 1353 aa31.53■■■□□ 2.64
NPC1-205ENST00000587163 WIZO95785 1651 aa31.48■■■□□ 2.63
NPC1-205ENST00000587163 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
NPC1-205ENST00000587163 WDR62O43379 1518 aa31.29■■■□□ 2.6
NPC1-205ENST00000587163 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
NPC1-205ENST00000587163 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
NPC1-205ENST00000587163 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
NPC1-205ENST00000587163 CFTRP13569 1480 aa31.11■■■□□ 2.57
NPC1-205ENST00000587163 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
NPC1-205ENST00000587163 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
NPC1-205ENST00000587163 URB2Q14146 1524 aaKnown RBP30.94■■■□□ 2.54
NPC1-205ENST00000587163 OSCARQ8IYS5 282 aa30.84■■■□□ 2.53
NPC1-205ENST00000587163 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
NPC1-205ENST00000587163 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
NPC1-205ENST00000587163 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
NPC1-205ENST00000587163 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
NPC1-205ENST00000587163 TOPBP1Q92547 1522 aa30.55■■■□□ 2.48
NPC1-205ENST00000587163 RIMBP3CA6NJZ7 1639 aa30.45■■■□□ 2.47
NPC1-205ENST00000587163 RIMBP3BA6NNM3 1639 aa30.45■■■□□ 2.47
NPC1-205ENST00000587163 RIMBP3Q9UFD9 1639 aa30.45■■■□□ 2.47
NPC1-205ENST00000587163 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
NPC1-205ENST00000587163 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
NPC1-205ENST00000587163 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
NPC1-205ENST00000587163 ARHGEF11O15085 1522 aa30.33■■■□□ 2.45
NPC1-205ENST00000587163 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
NPC1-205ENST00000587163 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
NPC1-205ENST00000587163 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
NPC1-205ENST00000587163 CHD1O14646 1710 aa30.2■■■□□ 2.43
NPC1-205ENST00000587163 CYB5RLQ6IPT4 315 aa30.17■■■□□ 2.42
NPC1-205ENST00000587163 RAD54L2Q9Y4B4 1467 aa30.16■■■□□ 2.42
NPC1-205ENST00000587163 FBLN2P98095 1184 aa30.15■■■□□ 2.42
NPC1-205ENST00000587163 TDRD9Q8NDG6 1382 aaKnown RBP30.1■■■□□ 2.41
NPC1-205ENST00000587163 SOGA1O94964 1423 aa30.1■■■□□ 2.41
NPC1-205ENST00000587163 ARAP1Q96P48 1450 aa30.03■■■□□ 2.4
NPC1-205ENST00000587163 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
NPC1-205ENST00000587163 CUX1P39880 1505 aa29.96■■■□□ 2.39
NPC1-205ENST00000587163 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.39
NPC1-205ENST00000587163 TRHP20396 242 aaPredicted RBP29.89■■■□□ 2.38
NPC1-205ENST00000587163 WDR97A6NE52 1622 aa29.89■■■□□ 2.37
NPC1-205ENST00000587163 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
NPC1-205ENST00000587163 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
NPC1-205ENST00000587163 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
NPC1-205ENST00000587163 MAGI1Q96QZ7 1491 aaPredicted RBP29.83■■■□□ 2.37
NPC1-205ENST00000587163 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
NPC1-205ENST00000587163 SYNJ2O15056 1496 aa29.75■■■□□ 2.35
NPC1-205ENST00000587163 GAPVD1Q14C86 1478 aa29.71■■■□□ 2.35
NPC1-205ENST00000587163 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
NPC1-205ENST00000587163 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
NPC1-205ENST00000587163 SUPT5HO00267 1087 aaKnown RBP29.63■■■□□ 2.33
NPC1-205ENST00000587163 ABCA5Q8WWZ7 1642 aa29.6■■■□□ 2.33
NPC1-205ENST00000587163 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
NPC1-205ENST00000587163 GRIN2AQ12879 1464 aa29.45■■■□□ 2.31
NPC1-205ENST00000587163 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
NPC1-205ENST00000587163 ADAMTS12P58397 1594 aa29.39■■■□□ 2.29
NPC1-205ENST00000587163 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
NPC1-205ENST00000587163 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
NPC1-205ENST00000587163 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
NPC1-205ENST00000587163 NUP160Q12769 1436 aa29.37■■■□□ 2.29
NPC1-205ENST00000587163 FHAD1B1AJZ9 1412 aa29.31■■■□□ 2.28
NPC1-205ENST00000587163 SHROOM2Q13796 1616 aa29.25■■■□□ 2.27
NPC1-205ENST00000587163 ERICH3Q5RHP9 1530 aa29.25■■■□□ 2.27
NPC1-205ENST00000587163 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
NPC1-205ENST00000587163 PRG4Q92954 1404 aaPredicted RBP29.12■■■□□ 2.25
NPC1-205ENST00000587163 JPH4Q96JJ6 628 aa29.1■■■□□ 2.25
NPC1-205ENST00000587163 KIF13AQ9H1H9 1805 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms