RNA–Protein interactions for RNA: ENST00000522381.1

CLINT1-205, Transcript of clathrin interactor 1, humanhuman

TSL 5

Gene CLINT1, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-205ENST00000522381 AEBP2Q6ZN18 517 aaPredicted RBP34.23■■■■□ 3.07
CLINT1-205ENST00000522381 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
CLINT1-205ENST00000522381 SENP3Q9H4L4 574 aaPredicted RBP29.15■■■□□ 2.26
CLINT1-205ENST00000522381 PHF23Q9BUL5 403 aaPredicted RBP28.72■■■□□ 2.19
CLINT1-205ENST00000522381 FOXD1Q16676 465 aa27.42■■□□□ 1.98
CLINT1-205ENST00000522381 POTEDQ86YR6 584 aa27.03■■□□□ 1.92
CLINT1-205ENST00000522381 MSH5O43196 834 aa25.87■■□□□ 1.73
CLINT1-205ENST00000522381 PIAS4Q8N2W9 510 aaPredicted RBP25.34■■□□□ 1.65
CLINT1-205ENST00000522381 PPP6R1Q9UPN7 881 aa24.97■■□□□ 1.59
CLINT1-205ENST00000522381 ADRA2BP18089 450 aa24.8■■□□□ 1.56
CLINT1-205ENST00000522381 PLPPR3Q6T4P5 718 aa24.66■■□□□ 1.54
CLINT1-205ENST00000522381 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
CLINT1-205ENST00000522381 MAPK8IP2Q13387 824 aaPredicted RBP23.12■■□□□ 1.29
CLINT1-205ENST00000522381 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
CLINT1-205ENST00000522381 CACNB1Q02641 598 aaPredicted RBP22.86■■□□□ 1.25
CLINT1-205ENST00000522381 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
CLINT1-205ENST00000522381 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
CLINT1-205ENST00000522381 RNF39Q9H2S5 420 aa22.08■■□□□ 1.13
CLINT1-205ENST00000522381 CCDC180Q9P1Z9 1646 aa22■■□□□ 1.11
CLINT1-205ENST00000522381 ABCC9O60706 1549 aa21.92■■□□□ 1.1
CLINT1-205ENST00000522381 HOXD11P31277 338 aaPredicted RBP21.78■■□□□ 1.08
CLINT1-205ENST00000522381 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
CLINT1-205ENST00000522381 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
CLINT1-205ENST00000522381 RNF216Q9NWF9 866 aaPredicted RBP21.33■■□□□ 1.01
CLINT1-205ENST00000522381 CNKSR2Q8WXI2 1034 aa21.28■■□□□ 1
CLINT1-205ENST00000522381 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
CLINT1-205ENST00000522381 POTEHQ6S545 545 aa20.96■□□□□ 0.95
CLINT1-205ENST00000522381 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
CLINT1-205ENST00000522381 NCBP3Q53F19 620 aaKnown RBP20.78■□□□□ 0.92
CLINT1-205ENST00000522381 NACADO15069 1562 aa20.76■□□□□ 0.91
CLINT1-205ENST00000522381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.91
CLINT1-205ENST00000522381 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
CLINT1-205ENST00000522381 MYO15BQ96JP2 1530 aa20.45■□□□□ 0.86
CLINT1-205ENST00000522381 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
CLINT1-205ENST00000522381 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
CLINT1-205ENST00000522381 DSG3P32926 999 aa20.37■□□□□ 0.85
CLINT1-205ENST00000522381 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLINT1-205ENST00000522381 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
CLINT1-205ENST00000522381 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
CLINT1-205ENST00000522381 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
CLINT1-205ENST00000522381 CAPN15O75808 1086 aa20.23■□□□□ 0.83
CLINT1-205ENST00000522381 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
CLINT1-205ENST00000522381 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
CLINT1-205ENST00000522381 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
CLINT1-205ENST00000522381 KCNA4P22459 653 aa20.02■□□□□ 0.8
CLINT1-205ENST00000522381 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
CLINT1-205ENST00000522381 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
CLINT1-205ENST00000522381 EIF4G1Q04637 1599 aaKnown RBP19.8■□□□□ 0.76
CLINT1-205ENST00000522381 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
CLINT1-205ENST00000522381 ABCB7O75027 752 aa19.76■□□□□ 0.75
CLINT1-205ENST00000522381 TRHP20396 242 aaPredicted RBP19.7■□□□□ 0.74
CLINT1-205ENST00000522381 SLC4A2P04920 1241 aa19.54■□□□□ 0.72
CLINT1-205ENST00000522381 ZNF219Q9P2Y4 722 aaPredicted RBP19.52■□□□□ 0.72
CLINT1-205ENST00000522381 CHRDL2Q6WN34 429 aa19.39■□□□□ 0.69
CLINT1-205ENST00000522381 APLP2Q06481 763 aa19.35■□□□□ 0.69
CLINT1-205ENST00000522381 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
CLINT1-205ENST00000522381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.2■□□□□ 0.66
CLINT1-205ENST00000522381 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
CLINT1-205ENST00000522381 SP7Q8TDD2 431 aaPredicted RBP19.18■□□□□ 0.66
CLINT1-205ENST00000522381 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
CLINT1-205ENST00000522381 SAMD1Q6SPF0 538 aaPredicted RBP19.09■□□□□ 0.65
CLINT1-205ENST00000522381 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
CLINT1-205ENST00000522381 CUX2O14529 1486 aa19.03■□□□□ 0.64
CLINT1-205ENST00000522381 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
CLINT1-205ENST00000522381 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
CLINT1-205ENST00000522381 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
CLINT1-205ENST00000522381 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
CLINT1-205ENST00000522381 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
CLINT1-205ENST00000522381 POLA2Q14181 598 aa18.95■□□□□ 0.62
CLINT1-205ENST00000522381 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
CLINT1-205ENST00000522381 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
CLINT1-205ENST00000522381 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
CLINT1-205ENST00000522381 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
CLINT1-205ENST00000522381 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CLINT1-205ENST00000522381 NESP48681 1621 aa18.79■□□□□ 0.6
CLINT1-205ENST00000522381 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.6
CLINT1-205ENST00000522381 PIP4P2Q8N4L2 257 aa18.76■□□□□ 0.59
CLINT1-205ENST00000522381 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
CLINT1-205ENST00000522381 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
CLINT1-205ENST00000522381 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
CLINT1-205ENST00000522381 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
CLINT1-205ENST00000522381 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
CLINT1-205ENST00000522381 HAX1O00165 279 aa18.64■□□□□ 0.57
CLINT1-205ENST00000522381 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
CLINT1-205ENST00000522381 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
CLINT1-205ENST00000522381 WIZO95785 1651 aa18.51■□□□□ 0.55
CLINT1-205ENST00000522381 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
CLINT1-205ENST00000522381 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
CLINT1-205ENST00000522381 EVX2Q03828 476 aa18.48■□□□□ 0.55
CLINT1-205ENST00000522381 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
CLINT1-205ENST00000522381 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLINT1-205ENST00000522381 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
CLINT1-205ENST00000522381 WDR62O43379 1518 aa18.44■□□□□ 0.54
CLINT1-205ENST00000522381 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
CLINT1-205ENST00000522381 ZBTB22O15209 634 aa18.38■□□□□ 0.53
CLINT1-205ENST00000522381 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
CLINT1-205ENST00000522381 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
CLINT1-205ENST00000522381 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
CLINT1-205ENST00000522381 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
CLINT1-205ENST00000522381 CFTRP13569 1480 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms