RNA–Protein interactions for RNA: ENST00000355693.4

COA4-201, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COA4, Length 960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-201ENST00000355693 AEBP2Q6ZN18 517 aaPredicted RBP33.59■■■□□ 2.97
COA4-201ENST00000355693 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
COA4-201ENST00000355693 SENP3Q9H4L4 574 aaPredicted RBP28.72■■■□□ 2.19
COA4-201ENST00000355693 PHF23Q9BUL5 403 aaPredicted RBP28.32■■■□□ 2.12
COA4-201ENST00000355693 FOXD1Q16676 465 aa26.78■■□□□ 1.88
COA4-201ENST00000355693 PLPPR3Q6T4P5 718 aa25.25■■□□□ 1.63
COA4-201ENST00000355693 MSH5O43196 834 aa25.17■■□□□ 1.62
COA4-201ENST00000355693 PIAS4Q8N2W9 510 aaPredicted RBP25.01■■□□□ 1.59
COA4-201ENST00000355693 POTEDQ86YR6 584 aa24.94■■□□□ 1.58
COA4-201ENST00000355693 PPP6R1Q9UPN7 881 aa24.86■■□□□ 1.57
COA4-201ENST00000355693 ADRA2BP18089 450 aa24.8■■□□□ 1.56
COA4-201ENST00000355693 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
COA4-201ENST00000355693 MAPK8IP2Q13387 824 aaPredicted RBP22.85■■□□□ 1.25
COA4-201ENST00000355693 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
COA4-201ENST00000355693 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
COA4-201ENST00000355693 PPP4R3CPQ6ZMV5 832 aa22.1■■□□□ 1.13
COA4-201ENST00000355693 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
COA4-201ENST00000355693 DCAF8L1A6NGE4 600 aa21.9■■□□□ 1.1
COA4-201ENST00000355693 HOXD11P31277 338 aaPredicted RBP21.78■■□□□ 1.08
COA4-201ENST00000355693 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
COA4-201ENST00000355693 CNKSR2Q8WXI2 1034 aa21.74■■□□□ 1.07
COA4-201ENST00000355693 RNF216Q9NWF9 866 aaPredicted RBP21.58■■□□□ 1.05
COA4-201ENST00000355693 RNF39Q9H2S5 420 aa21.43■■□□□ 1.02
COA4-201ENST00000355693 ABCC9O60706 1549 aa21.27■■□□□ 1
COA4-201ENST00000355693 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
COA4-201ENST00000355693 C1QBPQ07021 282 aaKnown RBP21.12■□□□□ 0.97
COA4-201ENST00000355693 DNAJC5BQ9UF47 199 aa21.05■□□□□ 0.96
COA4-201ENST00000355693 NPM3O75607 178 aaKnown RBP20.86■□□□□ 0.93
COA4-201ENST00000355693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.935e-18■■■■■ 31.2
COA4-201ENST00000355693 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
COA4-201ENST00000355693 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
COA4-201ENST00000355693 NACADO15069 1562 aa20.49■□□□□ 0.87
COA4-201ENST00000355693 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
COA4-201ENST00000355693 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
COA4-201ENST00000355693 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
COA4-201ENST00000355693 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
COA4-201ENST00000355693 KCNA4P22459 653 aa20.28■□□□□ 0.84
COA4-201ENST00000355693 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
COA4-201ENST00000355693 CAPN15O75808 1086 aa20.13■□□□□ 0.81
COA4-201ENST00000355693 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
COA4-201ENST00000355693 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
COA4-201ENST00000355693 DSG3P32926 999 aa20■□□□□ 0.79
COA4-201ENST00000355693 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
COA4-201ENST00000355693 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
COA4-201ENST00000355693 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
COA4-201ENST00000355693 APLP2Q06481 763 aa19.78■□□□□ 0.76
COA4-201ENST00000355693 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
COA4-201ENST00000355693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
COA4-201ENST00000355693 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
COA4-201ENST00000355693 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
COA4-201ENST00000355693 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
COA4-201ENST00000355693 ABCB7O75027 752 aa19.64■□□□□ 0.73
COA4-201ENST00000355693 SAMD1Q6SPF0 538 aaPredicted RBP19.57■□□□□ 0.72
COA4-201ENST00000355693 POTEHQ6S545 545 aa19.51■□□□□ 0.71
COA4-201ENST00000355693 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
COA4-201ENST00000355693 MYCNP04198 464 aaPredicted RBP19.32■□□□□ 0.68
COA4-201ENST00000355693 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
COA4-201ENST00000355693 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
COA4-201ENST00000355693 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
COA4-201ENST00000355693 POLA2Q14181 598 aa19.14■□□□□ 0.65
COA4-201ENST00000355693 RBM42Q9BTD8 480 aaKnown RBP19.12■□□□□ 0.65
COA4-201ENST00000355693 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
COA4-201ENST00000355693 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
COA4-201ENST00000355693 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
COA4-201ENST00000355693 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
COA4-201ENST00000355693 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
COA4-201ENST00000355693 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
COA4-201ENST00000355693 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
COA4-201ENST00000355693 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
COA4-201ENST00000355693 WIZO95785 1651 aa18.87■□□□□ 0.61
COA4-201ENST00000355693 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
COA4-201ENST00000355693 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
COA4-201ENST00000355693 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
COA4-201ENST00000355693 CHRDL2Q6WN34 429 aa18.78■□□□□ 0.6
COA4-201ENST00000355693 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
COA4-201ENST00000355693 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
COA4-201ENST00000355693 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
COA4-201ENST00000355693 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
COA4-201ENST00000355693 ZBTB22O15209 634 aa18.61■□□□□ 0.57
COA4-201ENST00000355693 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
COA4-201ENST00000355693 NESP48681 1621 aa18.46■□□□□ 0.55
COA4-201ENST00000355693 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
COA4-201ENST00000355693 ATXN8OSP0DMR3 200 aa18.42■□□□□ 0.54
COA4-201ENST00000355693 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
COA4-201ENST00000355693 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
COA4-201ENST00000355693 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
COA4-201ENST00000355693 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
COA4-201ENST00000355693 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
COA4-201ENST00000355693 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
COA4-201ENST00000355693 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
COA4-201ENST00000355693 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
COA4-201ENST00000355693 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
COA4-201ENST00000355693 CFTRP13569 1480 aa18.25■□□□□ 0.51
COA4-201ENST00000355693 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
COA4-201ENST00000355693 FBLN2P98095 1184 aa18.21■□□□□ 0.51
COA4-201ENST00000355693 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
COA4-201ENST00000355693 SP7Q8TDD2 431 aaPredicted RBP18.19■□□□□ 0.5
COA4-201ENST00000355693 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
COA4-201ENST00000355693 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
COA4-201ENST00000355693 SPDYE2BA6NHP3 402 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms