RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
CLINT1-210ENST00000530742 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
CLINT1-210ENST00000530742 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
CLINT1-210ENST00000530742 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
CLINT1-210ENST00000530742 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.15
CLINT1-210ENST00000530742 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
CLINT1-210ENST00000530742 ABCC9O60706 1549 aa21.73■■□□□ 1.07
CLINT1-210ENST00000530742 NACADO15069 1562 aa21.68■■□□□ 1.06
CLINT1-210ENST00000530742 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
CLINT1-210ENST00000530742 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.04
CLINT1-210ENST00000530742 SCRIBQ14160 1630 aa21.48■■□□□ 1.03
CLINT1-210ENST00000530742 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
CLINT1-210ENST00000530742 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
CLINT1-210ENST00000530742 RB1CC1Q8TDY2 1594 aa21.26■□□□□ 0.99
CLINT1-210ENST00000530742 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
CLINT1-210ENST00000530742 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
CLINT1-210ENST00000530742 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
CLINT1-210ENST00000530742 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
CLINT1-210ENST00000530742 WIZO95785 1651 aa20.88■□□□□ 0.93
CLINT1-210ENST00000530742 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
CLINT1-210ENST00000530742 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
CLINT1-210ENST00000530742 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
CLINT1-210ENST00000530742 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
CLINT1-210ENST00000530742 PEG3Q9GZU2 1588 aa20.66■□□□□ 0.9
CLINT1-210ENST00000530742 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
CLINT1-210ENST00000530742 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
CLINT1-210ENST00000530742 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
CLINT1-210ENST00000530742 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
CLINT1-210ENST00000530742 HRCP23327 699 aa20.35■□□□□ 0.85
CLINT1-210ENST00000530742 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
CLINT1-210ENST00000530742 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
CLINT1-210ENST00000530742 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
CLINT1-210ENST00000530742 EEA1Q15075 1411 aa20.16■□□□□ 0.82
CLINT1-210ENST00000530742 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
CLINT1-210ENST00000530742 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
CLINT1-210ENST00000530742 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
CLINT1-210ENST00000530742 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
CLINT1-210ENST00000530742 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLINT1-210ENST00000530742 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
CLINT1-210ENST00000530742 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
CLINT1-210ENST00000530742 KIF21BO75037 1637 aa19.95■□□□□ 0.78
CLINT1-210ENST00000530742 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
CLINT1-210ENST00000530742 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
CLINT1-210ENST00000530742 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
CLINT1-210ENST00000530742 SOGA1O94964 1423 aa19.9■□□□□ 0.78
CLINT1-210ENST00000530742 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
CLINT1-210ENST00000530742 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
CLINT1-210ENST00000530742 GOLGA3Q08378 1498 aa19.82■□□□□ 0.76
CLINT1-210ENST00000530742 RUSC2Q8N2Y8 1516 aa19.8■□□□□ 0.76
CLINT1-210ENST00000530742 CEP162Q5TB80 1403 aa19.79■□□□□ 0.76
CLINT1-210ENST00000530742 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.75
CLINT1-210ENST00000530742 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
CLINT1-210ENST00000530742 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
CLINT1-210ENST00000530742 CFTRP13569 1480 aa19.7■□□□□ 0.74
CLINT1-210ENST00000530742 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
CLINT1-210ENST00000530742 CUX1P39880 1505 aa19.59■□□□□ 0.73
CLINT1-210ENST00000530742 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
CLINT1-210ENST00000530742 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
CLINT1-210ENST00000530742 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
CLINT1-210ENST00000530742 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
CLINT1-210ENST00000530742 CLIP1P30622 1438 aa19.44■□□□□ 0.7
CLINT1-210ENST00000530742 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
CLINT1-210ENST00000530742 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
CLINT1-210ENST00000530742 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
CLINT1-210ENST00000530742 KIF27Q86VH2 1401 aa19.37■□□□□ 0.69
CLINT1-210ENST00000530742 UBTFP17480 764 aaKnown RBP19.36■□□□□ 0.69
CLINT1-210ENST00000530742 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
CLINT1-210ENST00000530742 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
CLINT1-210ENST00000530742 MAP3K1Q13233 1512 aa19.21■□□□□ 0.67
CLINT1-210ENST00000530742 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
CLINT1-210ENST00000530742 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
CLINT1-210ENST00000530742 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
CLINT1-210ENST00000530742 IGF1RP08069 1367 aa19.17■□□□□ 0.66
CLINT1-210ENST00000530742 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
CLINT1-210ENST00000530742 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
CLINT1-210ENST00000530742 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
CLINT1-210ENST00000530742 CUL7Q14999 1698 aa19.13■□□□□ 0.65
CLINT1-210ENST00000530742 CUX2O14529 1486 aa19.12■□□□□ 0.65
CLINT1-210ENST00000530742 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
CLINT1-210ENST00000530742 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
CLINT1-210ENST00000530742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
CLINT1-210ENST00000530742 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
CLINT1-210ENST00000530742 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
CLINT1-210ENST00000530742 CTTNBP2Q8WZ74 1663 aa19.04■□□□□ 0.64
CLINT1-210ENST00000530742 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
CLINT1-210ENST00000530742 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
CLINT1-210ENST00000530742 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
CLINT1-210ENST00000530742 EFCAB5A4FU69 1503 aa19.01■□□□□ 0.63
CLINT1-210ENST00000530742 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
CLINT1-210ENST00000530742 CLSPNQ9HAW4 1339 aa18.96■□□□□ 0.63
CLINT1-210ENST00000530742 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.632e-6■■■■□ 25
CLINT1-210ENST00000530742 URB2Q14146 1524 aaKnown RBP18.95■□□□□ 0.62
CLINT1-210ENST00000530742 APLP2Q06481 763 aa18.94■□□□□ 0.62
CLINT1-210ENST00000530742 NESP48681 1621 aa18.92■□□□□ 0.62
CLINT1-210ENST00000530742 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.62
CLINT1-210ENST00000530742 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
CLINT1-210ENST00000530742 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
CLINT1-210ENST00000530742 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
CLINT1-210ENST00000530742 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
CLINT1-210ENST00000530742 FYCO1Q9BQS8 1478 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms