RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 AEBP2Q6ZN18 517 aaPredicted RBP15.19■□□□□ 0.02
CLINT1-202ENST00000518855 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
CLINT1-202ENST00000518855 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
CLINT1-202ENST00000518855 PHF23Q9BUL5 403 aaPredicted RBP12.73□□□□□ -0.37
CLINT1-202ENST00000518855 FOXD1Q16676 465 aa12.02□□□□□ -0.49
CLINT1-202ENST00000518855 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
CLINT1-202ENST00000518855 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
CLINT1-202ENST00000518855 ADRA2BP18089 450 aa11.32□□□□□ -0.6
CLINT1-202ENST00000518855 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
CLINT1-202ENST00000518855 MSH5O43196 834 aa11.07□□□□□ -0.64
CLINT1-202ENST00000518855 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
CLINT1-202ENST00000518855 NISCHQ9Y2I1 1504 aa10.62□□□□□ -0.71
CLINT1-202ENST00000518855 MAPK8IP2Q13387 824 aaPredicted RBP10.4□□□□□ -0.75
CLINT1-202ENST00000518855 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
CLINT1-202ENST00000518855 SCAF1Q9H7N4 1312 aaKnown RBP10.16□□□□□ -0.78
CLINT1-202ENST00000518855 PPP4R3CPQ6ZMV5 832 aa10.14□□□□□ -0.79
CLINT1-202ENST00000518855 CNKSR2Q8WXI2 1034 aa9.88□□□□□ -0.83
CLINT1-202ENST00000518855 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
CLINT1-202ENST00000518855 DCAF8L1A6NGE4 600 aa9.81□□□□□ -0.84
CLINT1-202ENST00000518855 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
CLINT1-202ENST00000518855 NPM3O75607 178 aaKnown RBP9.67□□□□□ -0.86
CLINT1-202ENST00000518855 NCBP3Q53F19 620 aaKnown RBP9.66□□□□□ -0.86
CLINT1-202ENST00000518855 KCNA4P22459 653 aa9.61□□□□□ -0.87
CLINT1-202ENST00000518855 RNF39Q9H2S5 420 aa9.54□□□□□ -0.88
CLINT1-202ENST00000518855 CACNB1Q02641 598 aaPredicted RBP9.52□□□□□ -0.89
CLINT1-202ENST00000518855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLINT1-202ENST00000518855 DNAJC5BQ9UF47 199 aa9.37□□□□□ -0.91
CLINT1-202ENST00000518855 C1QBPQ07021 282 aaKnown RBP9.34□□□□□ -0.91
CLINT1-202ENST00000518855 SLC4A2P04920 1241 aa9.24□□□□□ -0.93
CLINT1-202ENST00000518855 U3KPZ7 1027 aaPredicted RBP9.24□□□□□ -0.93
CLINT1-202ENST00000518855 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
CLINT1-202ENST00000518855 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
CLINT1-202ENST00000518855 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
CLINT1-202ENST00000518855 CAPN15O75808 1086 aa9.04□□□□□ -0.96
CLINT1-202ENST00000518855 SLC4A1APQ9BWU0 796 aaKnown RBP9.01□□□□□ -0.97
CLINT1-202ENST00000518855 DSG3P32926 999 aa8.98□□□□□ -0.97
CLINT1-202ENST00000518855 DCAF1Q9Y4B6 1507 aa8.96□□□□□ -0.97
CLINT1-202ENST00000518855 TRHP20396 242 aaPredicted RBP8.94□□□□□ -0.98
CLINT1-202ENST00000518855 ABCB7O75027 752 aa8.9□□□□□ -0.98
CLINT1-202ENST00000518855 ZBTB22O15209 634 aa8.89□□□□□ -0.99
CLINT1-202ENST00000518855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.85□□□□□ -0.99
CLINT1-202ENST00000518855 MYCNP04198 464 aaPredicted RBP8.85□□□□□ -0.99
CLINT1-202ENST00000518855 HNRNPUL2Q1KMD3 747 aaKnown RBP8.85□□□□□ -0.99
CLINT1-202ENST00000518855 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
CLINT1-202ENST00000518855 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
CLINT1-202ENST00000518855 ZNF219Q9P2Y4 722 aaPredicted RBP8.82□□□□□ -1
CLINT1-202ENST00000518855 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
CLINT1-202ENST00000518855 APLP2Q06481 763 aa8.77□□□□□ -1.01
CLINT1-202ENST00000518855 POLA2Q14181 598 aa8.73□□□□□ -1.01
CLINT1-202ENST00000518855 MYO15BQ96JP2 1530 aa8.7□□□□□ -1.02
CLINT1-202ENST00000518855 ABCC9O60706 1549 aa8.64□□□□□ -1.03
CLINT1-202ENST00000518855 HRCP23327 699 aa8.63□□□□□ -1.03
CLINT1-202ENST00000518855 SHROOM4Q9ULL8 1493 aa8.59□□□□□ -1.03
CLINT1-202ENST00000518855 CSRNP3Q8WYN3 585 aa8.51□□□□□ -1.05
CLINT1-202ENST00000518855 ATXN8OSP0DMR3 200 aa8.48□□□□□ -1.05
CLINT1-202ENST00000518855 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
CLINT1-202ENST00000518855 EHMT2Q96KQ7 1210 aa8.47□□□□□ -1.05
CLINT1-202ENST00000518855 OSCARQ8IYS5 282 aa8.46□□□□□ -1.06
CLINT1-202ENST00000518855 POTEHQ6S545 545 aa8.45□□□□□ -1.06
CLINT1-202ENST00000518855 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
CLINT1-202ENST00000518855 RBM42Q9BTD8 480 aaKnown RBP8.44□□□□□ -1.06
CLINT1-202ENST00000518855 EIF4G1Q04637 1599 aaKnown RBP8.39□□□□□ -1.07
CLINT1-202ENST00000518855 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
CLINT1-202ENST00000518855 MKRN4PQ13434 485 aaPredicted RBP8.37□□□□□ -1.07
CLINT1-202ENST00000518855 RSF1Q96T23 1441 aaPredicted RBP8.36□□□□□ -1.07
CLINT1-202ENST00000518855 NACADO15069 1562 aa8.33□□□□□ -1.08
CLINT1-202ENST00000518855 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
CLINT1-202ENST00000518855 TRIM26Q12899 539 aaPredicted RBP8.31□□□□□ -1.08
CLINT1-202ENST00000518855 AKT1S1Q96B36 256 aa8.3□□□□□ -1.08
CLINT1-202ENST00000518855 REM2Q8IYK8 340 aaPredicted RBP8.29□□□□□ -1.08
CLINT1-202ENST00000518855 BAZ1AQ9NRL2 1556 aaPredicted RBP8.29□□□□□ -1.08
CLINT1-202ENST00000518855 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
CLINT1-202ENST00000518855 PCGF6Q9BYE7 350 aa8.27□□□□□ -1.09
CLINT1-202ENST00000518855 FBLN2P98095 1184 aa8.27□□□□□ -1.09
CLINT1-202ENST00000518855 SCRIBQ14160 1630 aa8.26□□□□□ -1.09
CLINT1-202ENST00000518855 PITPNM1O00562 1244 aa8.23□□□□□ -1.09
CLINT1-202ENST00000518855 PELP1Q8IZL8 1130 aaKnown RBP8.22□□□□□ -1.09
CLINT1-202ENST00000518855 SPDYE2BA6NHP3 402 aa8.21□□□□□ -1.1
CLINT1-202ENST00000518855 SPDYE6P0CI01 402 aa8.21□□□□□ -1.1
CLINT1-202ENST00000518855 SPDYE2Q495Y8 402 aa8.21□□□□□ -1.1
CLINT1-202ENST00000518855 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
CLINT1-202ENST00000518855 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
CLINT1-202ENST00000518855 PIP4P2Q8N4L2 257 aa8.16□□□□□ -1.1
CLINT1-202ENST00000518855 MROH2BQ7Z745 1585 aa8.16□□□□□ -1.1
CLINT1-202ENST00000518855 PPARGC1BQ86YN6 1023 aaKnown RBP8.16□□□□□ -1.1
CLINT1-202ENST00000518855 WIZO95785 1651 aa8.15□□□□□ -1.1
CLINT1-202ENST00000518855 TOP2AP11388 1531 aaKnown RBP8.15□□□□□ -1.11
CLINT1-202ENST00000518855 SSUH2Q9Y2M2 353 aa8.14□□□□□ -1.11
CLINT1-202ENST00000518855 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
CLINT1-202ENST00000518855 PEG3Q9GZU2 1588 aa8.11□□□□□ -1.11
CLINT1-202ENST00000518855 CLEC11AQ9Y240 323 aa8.11□□□□□ -1.11
CLINT1-202ENST00000518855 UNC13AQ9UPW8 1703 aa8.11□□□□□ -1.11
CLINT1-202ENST00000518855 FXR2P51116 673 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLINT1-202ENST00000518855 SMARCA4P51532 1647 aa8.09□□□□□ -1.11
CLINT1-202ENST00000518855 CECR2Q9BXF3 1484 aa8.09□□□□□ -1.12
CLINT1-202ENST00000518855 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
CLINT1-202ENST00000518855 SMARCA2P51531 1590 aa8.08□□□□□ -1.12
CLINT1-202ENST00000518855 EEA1Q15075 1411 aa8.07□□□□□ -1.12
CLINT1-202ENST00000518855 SPDYE1Q8NFV5 336 aaPredicted RBP8.04□□□□□ -1.12
CLINT1-202ENST00000518855 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms