RNA–Protein interactions for RNA: ENST00000568325.1

AMFR-210, Transcript of autocrine motility factor receptor, humanhuman

TSL 2

Gene AMFR, Length 1,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMFR-210ENST00000568325 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
AMFR-210ENST00000568325 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
AMFR-210ENST00000568325 ABCC9O60706 1549 aa27.65■■■□□ 2.02
AMFR-210ENST00000568325 NACADO15069 1562 aa26.75■■□□□ 1.87
AMFR-210ENST00000568325 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
AMFR-210ENST00000568325 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
AMFR-210ENST00000568325 MYO15BQ96JP2 1530 aa26.66■■□□□ 1.86
AMFR-210ENST00000568325 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
AMFR-210ENST00000568325 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
AMFR-210ENST00000568325 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
AMFR-210ENST00000568325 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
AMFR-210ENST00000568325 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
AMFR-210ENST00000568325 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
AMFR-210ENST00000568325 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
AMFR-210ENST00000568325 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
AMFR-210ENST00000568325 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
AMFR-210ENST00000568325 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
AMFR-210ENST00000568325 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
AMFR-210ENST00000568325 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
AMFR-210ENST00000568325 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
AMFR-210ENST00000568325 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
AMFR-210ENST00000568325 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
AMFR-210ENST00000568325 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
AMFR-210ENST00000568325 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
AMFR-210ENST00000568325 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
AMFR-210ENST00000568325 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.54
AMFR-210ENST00000568325 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
AMFR-210ENST00000568325 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
AMFR-210ENST00000568325 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
AMFR-210ENST00000568325 WIZO95785 1651 aa24.37■■□□□ 1.49
AMFR-210ENST00000568325 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
AMFR-210ENST00000568325 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
AMFR-210ENST00000568325 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
AMFR-210ENST00000568325 NESP48681 1621 aa23.95■■□□□ 1.42
AMFR-210ENST00000568325 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
AMFR-210ENST00000568325 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
AMFR-210ENST00000568325 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
AMFR-210ENST00000568325 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
AMFR-210ENST00000568325 CFTRP13569 1480 aa23.8■■□□□ 1.4
AMFR-210ENST00000568325 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
AMFR-210ENST00000568325 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
AMFR-210ENST00000568325 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
AMFR-210ENST00000568325 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
AMFR-210ENST00000568325 CUX2O14529 1486 aa23.65■■□□□ 1.38
AMFR-210ENST00000568325 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
AMFR-210ENST00000568325 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
AMFR-210ENST00000568325 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
AMFR-210ENST00000568325 WDR62O43379 1518 aa23.5■■□□□ 1.35
AMFR-210ENST00000568325 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
AMFR-210ENST00000568325 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
AMFR-210ENST00000568325 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
AMFR-210ENST00000568325 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
AMFR-210ENST00000568325 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
AMFR-210ENST00000568325 CUX1P39880 1505 aa23.11■■□□□ 1.29
AMFR-210ENST00000568325 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
AMFR-210ENST00000568325 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
AMFR-210ENST00000568325 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
AMFR-210ENST00000568325 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
AMFR-210ENST00000568325 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
AMFR-210ENST00000568325 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
AMFR-210ENST00000568325 SOGA1O94964 1423 aa22.95■■□□□ 1.26
AMFR-210ENST00000568325 ZNF608Q9ULD9 1512 aaPredicted RBP22.95■■□□□ 1.26
AMFR-210ENST00000568325 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
AMFR-210ENST00000568325 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
AMFR-210ENST00000568325 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
AMFR-210ENST00000568325 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
AMFR-210ENST00000568325 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
AMFR-210ENST00000568325 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.247e-6■■□□□ 12.2
AMFR-210ENST00000568325 TDRD9Q8NDG6 1382 aaKnown RBP22.77■■□□□ 1.24
AMFR-210ENST00000568325 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
AMFR-210ENST00000568325 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
AMFR-210ENST00000568325 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
AMFR-210ENST00000568325 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
AMFR-210ENST00000568325 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
AMFR-210ENST00000568325 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
AMFR-210ENST00000568325 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
AMFR-210ENST00000568325 CHD1O14646 1710 aa22.62■■□□□ 1.21
AMFR-210ENST00000568325 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
AMFR-210ENST00000568325 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
AMFR-210ENST00000568325 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
AMFR-210ENST00000568325 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
AMFR-210ENST00000568325 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
AMFR-210ENST00000568325 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
AMFR-210ENST00000568325 FBLN2P98095 1184 aa22.46■■□□□ 1.19
AMFR-210ENST00000568325 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
AMFR-210ENST00000568325 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
AMFR-210ENST00000568325 CUL7Q14999 1698 aa22.42■■□□□ 1.18
AMFR-210ENST00000568325 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
AMFR-210ENST00000568325 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
AMFR-210ENST00000568325 IGF1RP08069 1367 aa22.38■■□□□ 1.17
AMFR-210ENST00000568325 NUP160Q12769 1436 aa22.32■■□□□ 1.16
AMFR-210ENST00000568325 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
AMFR-210ENST00000568325 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
AMFR-210ENST00000568325 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
AMFR-210ENST00000568325 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
AMFR-210ENST00000568325 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
AMFR-210ENST00000568325 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
AMFR-210ENST00000568325 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
AMFR-210ENST00000568325 CARMIL1Q5VZK9 1371 aa22.25■■□□□ 1.15
AMFR-210ENST00000568325 SHROOM2Q13796 1616 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms