RNA–Protein interactions for RNA: ENST00000464369.1

RTL8C-202, Transcript of retrotransposon Gag like 8C, humanhuman

TSL 5

Gene RTL8C, Length 616 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8C-202ENST00000464369 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
RTL8C-202ENST00000464369 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
RTL8C-202ENST00000464369 ABCC9O60706 1549 aa21.52■■□□□ 1.04
RTL8C-202ENST00000464369 NACADO15069 1562 aa20.84■□□□□ 0.93
RTL8C-202ENST00000464369 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.92
RTL8C-202ENST00000464369 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
RTL8C-202ENST00000464369 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
RTL8C-202ENST00000464369 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
RTL8C-202ENST00000464369 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
RTL8C-202ENST00000464369 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
RTL8C-202ENST00000464369 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
RTL8C-202ENST00000464369 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
RTL8C-202ENST00000464369 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
RTL8C-202ENST00000464369 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
RTL8C-202ENST00000464369 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
RTL8C-202ENST00000464369 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
RTL8C-202ENST00000464369 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
RTL8C-202ENST00000464369 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
RTL8C-202ENST00000464369 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
RTL8C-202ENST00000464369 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
RTL8C-202ENST00000464369 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
RTL8C-202ENST00000464369 SMARCA2P51531 1590 aa19.22■□□□□ 0.67
RTL8C-202ENST00000464369 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
RTL8C-202ENST00000464369 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
RTL8C-202ENST00000464369 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
RTL8C-202ENST00000464369 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
RTL8C-202ENST00000464369 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
RTL8C-202ENST00000464369 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
RTL8C-202ENST00000464369 WIZO95785 1651 aa19.05■□□□□ 0.64
RTL8C-202ENST00000464369 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
RTL8C-202ENST00000464369 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
RTL8C-202ENST00000464369 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
RTL8C-202ENST00000464369 DNAJC5Q9H3Z4 198 aa18.74■□□□□ 0.59
RTL8C-202ENST00000464369 LAMC3Q9Y6N6 1575 aa18.71■□□□□ 0.59
RTL8C-202ENST00000464369 NESP48681 1621 aa18.67■□□□□ 0.58
RTL8C-202ENST00000464369 CUX2O14529 1486 aa18.61■□□□□ 0.57
RTL8C-202ENST00000464369 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
RTL8C-202ENST00000464369 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
RTL8C-202ENST00000464369 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
RTL8C-202ENST00000464369 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
RTL8C-202ENST00000464369 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
RTL8C-202ENST00000464369 CFTRP13569 1480 aa18.53■□□□□ 0.56
RTL8C-202ENST00000464369 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
RTL8C-202ENST00000464369 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
RTL8C-202ENST00000464369 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
RTL8C-202ENST00000464369 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
RTL8C-202ENST00000464369 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
RTL8C-202ENST00000464369 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
RTL8C-202ENST00000464369 WDR62O43379 1518 aa18.3■□□□□ 0.52
RTL8C-202ENST00000464369 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
RTL8C-202ENST00000464369 ABCC8Q09428 1581 aa18.16■□□□□ 0.5
RTL8C-202ENST00000464369 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
RTL8C-202ENST00000464369 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
RTL8C-202ENST00000464369 CUX1P39880 1505 aa18.03■□□□□ 0.48
RTL8C-202ENST00000464369 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
RTL8C-202ENST00000464369 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
RTL8C-202ENST00000464369 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
RTL8C-202ENST00000464369 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
RTL8C-202ENST00000464369 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
RTL8C-202ENST00000464369 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
RTL8C-202ENST00000464369 WRNQ14191 1432 aaPredicted RBP eCLIP17.92■□□□□ 0.46
RTL8C-202ENST00000464369 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
RTL8C-202ENST00000464369 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
RTL8C-202ENST00000464369 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
RTL8C-202ENST00000464369 SOGA1O94964 1423 aa17.87■□□□□ 0.45
RTL8C-202ENST00000464369 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
RTL8C-202ENST00000464369 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
RTL8C-202ENST00000464369 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
RTL8C-202ENST00000464369 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
RTL8C-202ENST00000464369 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.432e-11■□□□□ 10.5
RTL8C-202ENST00000464369 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
RTL8C-202ENST00000464369 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
RTL8C-202ENST00000464369 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
RTL8C-202ENST00000464369 CHD1O14646 1710 aa17.69■□□□□ 0.42
RTL8C-202ENST00000464369 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
RTL8C-202ENST00000464369 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
RTL8C-202ENST00000464369 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
RTL8C-202ENST00000464369 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
RTL8C-202ENST00000464369 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
RTL8C-202ENST00000464369 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
RTL8C-202ENST00000464369 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
RTL8C-202ENST00000464369 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
RTL8C-202ENST00000464369 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
RTL8C-202ENST00000464369 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
RTL8C-202ENST00000464369 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
RTL8C-202ENST00000464369 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
RTL8C-202ENST00000464369 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
RTL8C-202ENST00000464369 CUL7Q14999 1698 aa17.5■□□□□ 0.39
RTL8C-202ENST00000464369 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
RTL8C-202ENST00000464369 FBLN2P98095 1184 aa17.48■□□□□ 0.39
RTL8C-202ENST00000464369 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
RTL8C-202ENST00000464369 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
RTL8C-202ENST00000464369 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
RTL8C-202ENST00000464369 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
RTL8C-202ENST00000464369 IGF1RP08069 1367 aa17.43■□□□□ 0.38
RTL8C-202ENST00000464369 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
RTL8C-202ENST00000464369 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
RTL8C-202ENST00000464369 NUP160Q12769 1436 aa17.38■□□□□ 0.37
RTL8C-202ENST00000464369 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
RTL8C-202ENST00000464369 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms