RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
SPTAN1-220ENST00000630147 ABCC9O60706 1549 aa24.54■■□□□ 1.52
SPTAN1-220ENST00000630147 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
SPTAN1-220ENST00000630147 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
SPTAN1-220ENST00000630147 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
SPTAN1-220ENST00000630147 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
SPTAN1-220ENST00000630147 NACADO15069 1562 aa22.84■■□□□ 1.25
SPTAN1-220ENST00000630147 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
SPTAN1-220ENST00000630147 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
SPTAN1-220ENST00000630147 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
SPTAN1-220ENST00000630147 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
SPTAN1-220ENST00000630147 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
SPTAN1-220ENST00000630147 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
SPTAN1-220ENST00000630147 CC2D2AQ9P2K1 1620 aa22.12■■□□□ 1.13
SPTAN1-220ENST00000630147 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
SPTAN1-220ENST00000630147 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
SPTAN1-220ENST00000630147 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
SPTAN1-220ENST00000630147 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
SPTAN1-220ENST00000630147 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
SPTAN1-220ENST00000630147 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
SPTAN1-220ENST00000630147 CUX2O14529 1486 aa21.12■□□□□ 0.97
SPTAN1-220ENST00000630147 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
SPTAN1-220ENST00000630147 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
SPTAN1-220ENST00000630147 NESP48681 1621 aa21.01■□□□□ 0.95
SPTAN1-220ENST00000630147 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
SPTAN1-220ENST00000630147 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
SPTAN1-220ENST00000630147 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
SPTAN1-220ENST00000630147 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
SPTAN1-220ENST00000630147 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
SPTAN1-220ENST00000630147 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
SPTAN1-220ENST00000630147 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
SPTAN1-220ENST00000630147 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
SPTAN1-220ENST00000630147 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
SPTAN1-220ENST00000630147 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
SPTAN1-220ENST00000630147 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
SPTAN1-220ENST00000630147 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
SPTAN1-220ENST00000630147 WIZO95785 1651 aa20.48■□□□□ 0.87
SPTAN1-220ENST00000630147 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
SPTAN1-220ENST00000630147 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
SPTAN1-220ENST00000630147 WDR62O43379 1518 aa20.41■□□□□ 0.86
SPTAN1-220ENST00000630147 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
SPTAN1-220ENST00000630147 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
SPTAN1-220ENST00000630147 CFTRP13569 1480 aa20.16■□□□□ 0.82
SPTAN1-220ENST00000630147 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
SPTAN1-220ENST00000630147 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
SPTAN1-220ENST00000630147 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
SPTAN1-220ENST00000630147 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
SPTAN1-220ENST00000630147 PRDM2Q13029 1718 aa20.03■□□□□ 0.8
SPTAN1-220ENST00000630147 RIMBP3CA6NJZ7 1639 aa20.01■□□□□ 0.79
SPTAN1-220ENST00000630147 RIMBP3BA6NNM3 1639 aa20.01■□□□□ 0.79
SPTAN1-220ENST00000630147 RIMBP3Q9UFD9 1639 aa20.01■□□□□ 0.79
SPTAN1-220ENST00000630147 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
SPTAN1-220ENST00000630147 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
SPTAN1-220ENST00000630147 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
SPTAN1-220ENST00000630147 ARHGEF11O15085 1522 aa19.87■□□□□ 0.77
SPTAN1-220ENST00000630147 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
SPTAN1-220ENST00000630147 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
SPTAN1-220ENST00000630147 CHD1O14646 1710 aa19.82■□□□□ 0.76
SPTAN1-220ENST00000630147 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
SPTAN1-220ENST00000630147 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
SPTAN1-220ENST00000630147 AQRO60306 1485 aaKnown RBP eCLIP19.75■□□□□ 0.75
SPTAN1-220ENST00000630147 TARBP1Q13395 1621 aaKnown RBP19.72■□□□□ 0.75
SPTAN1-220ENST00000630147 FBLN2P98095 1184 aa19.71■□□□□ 0.75
SPTAN1-220ENST00000630147 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
SPTAN1-220ENST00000630147 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
SPTAN1-220ENST00000630147 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
SPTAN1-220ENST00000630147 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
SPTAN1-220ENST00000630147 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
SPTAN1-220ENST00000630147 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
SPTAN1-220ENST00000630147 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
SPTAN1-220ENST00000630147 SOGA1O94964 1423 aa19.53■□□□□ 0.72
SPTAN1-220ENST00000630147 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
SPTAN1-220ENST00000630147 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
SPTAN1-220ENST00000630147 CUX1P39880 1505 aa19.45■□□□□ 0.7
SPTAN1-220ENST00000630147 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
SPTAN1-220ENST00000630147 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
SPTAN1-220ENST00000630147 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
SPTAN1-220ENST00000630147 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
SPTAN1-220ENST00000630147 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
SPTAN1-220ENST00000630147 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
SPTAN1-220ENST00000630147 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
SPTAN1-220ENST00000630147 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
SPTAN1-220ENST00000630147 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
SPTAN1-220ENST00000630147 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.67
SPTAN1-220ENST00000630147 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
SPTAN1-220ENST00000630147 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
SPTAN1-220ENST00000630147 CEP170Q5SW79 1584 aa19.16■□□□□ 0.66
SPTAN1-220ENST00000630147 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
SPTAN1-220ENST00000630147 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
SPTAN1-220ENST00000630147 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
SPTAN1-220ENST00000630147 NUP160Q12769 1436 aa19.06■□□□□ 0.64
SPTAN1-220ENST00000630147 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
SPTAN1-220ENST00000630147 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
SPTAN1-220ENST00000630147 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
SPTAN1-220ENST00000630147 KIF13AQ9H1H9 1805 aa19.03■□□□□ 0.64
SPTAN1-220ENST00000630147 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
SPTAN1-220ENST00000630147 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
SPTAN1-220ENST00000630147 PRG4Q92954 1404 aaPredicted RBP18.96■□□□□ 0.63
SPTAN1-220ENST00000630147 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
SPTAN1-220ENST00000630147 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms