RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 AEBP2Q6ZN18 517 aaPredicted RBP11.47□□□□□ -0.57
LBR-208ENST00000488632 CHIC1Q5VXU3 224 aa10.88□□□□□ -0.67
LBR-208ENST00000488632 SENP3Q9H4L4 574 aaPredicted RBP9.81□□□□□ -0.84
LBR-208ENST00000488632 PHF23Q9BUL5 403 aaPredicted RBP9.64□□□□□ -0.87
LBR-208ENST00000488632 FOXD1Q16676 465 aa9.12□□□□□ -0.95
LBR-208ENST00000488632 PLPPR3Q6T4P5 718 aa8.68□□□□□ -1.02
LBR-208ENST00000488632 MSH5O43196 834 aa8.57□□□□□ -1.04
LBR-208ENST00000488632 PIAS4Q8N2W9 510 aaPredicted RBP8.53□□□□□ -1.04
LBR-208ENST00000488632 PPP6R1Q9UPN7 881 aa8.49□□□□□ -1.05
LBR-208ENST00000488632 ADRA2BP18089 450 aa8.46□□□□□ -1.06
LBR-208ENST00000488632 POTEDQ86YR6 584 aa8.38□□□□□ -1.07
LBR-208ENST00000488632 DMRT2Q9Y5R5 561 aa7.78□□□□□ -1.16
LBR-208ENST00000488632 MAPK8IP2Q13387 824 aaPredicted RBP7.76□□□□□ -1.17
LBR-208ENST00000488632 SCAF1Q9H7N4 1312 aaKnown RBP7.75□□□□□ -1.17
LBR-208ENST00000488632 PPP4R3CPQ6ZMV5 832 aa7.59□□□□□ -1.19
LBR-208ENST00000488632 HOXD11P31277 338 aaPredicted RBP7.47□□□□□ -1.21
LBR-208ENST00000488632 CNKSR2Q8WXI2 1034 aa7.47□□□□□ -1.21
LBR-208ENST00000488632 DCAF8L1A6NGE4 600 aa7.41□□□□□ -1.22
LBR-208ENST00000488632 RNF216Q9NWF9 866 aaPredicted RBP7.41□□□□□ -1.22
LBR-208ENST00000488632 CACNB1Q02641 598 aaPredicted RBP7.33□□□□□ -1.24
LBR-208ENST00000488632 RNF39Q9H2S5 420 aa7.31□□□□□ -1.24
LBR-208ENST00000488632 NCBP3Q53F19 620 aaKnown RBP7.3□□□□□ -1.24
LBR-208ENST00000488632 DNAJC5BQ9UF47 199 aa7.25□□□□□ -1.25
LBR-208ENST00000488632 NPM3O75607 178 aaKnown RBP7.2□□□□□ -1.26
LBR-208ENST00000488632 C1QBPQ07021 282 aaKnown RBP7.19□□□□□ -1.26
LBR-208ENST00000488632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
LBR-208ENST00000488632 KCNA4P22459 653 aa7.03□□□□□ -1.28
LBR-208ENST00000488632 U3KPZ7 1027 aaPredicted RBP6.97□□□□□ -1.29
LBR-208ENST00000488632 SLC4A2P04920 1241 aa6.87□□□□□ -1.31
LBR-208ENST00000488632 SPINK5Q9NQ38 1064 aaPredicted RBP6.85□□□□□ -1.31
LBR-208ENST00000488632 CAPN15O75808 1086 aa6.84□□□□□ -1.31
LBR-208ENST00000488632 DSG3P32926 999 aa6.82□□□□□ -1.32
LBR-208ENST00000488632 APLP2Q06481 763 aa6.79□□□□□ -1.32
LBR-208ENST00000488632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.77□□□□□ -1.33
LBR-208ENST00000488632 HNRNPUL2Q1KMD3 747 aaKnown RBP6.77□□□□□ -1.33
LBR-208ENST00000488632 ZNF219Q9P2Y4 722 aaPredicted RBP6.75□□□□□ -1.33
LBR-208ENST00000488632 SAMD1Q6SPF0 538 aaPredicted RBP6.73□□□□□ -1.33
LBR-208ENST00000488632 TRHP20396 242 aaPredicted RBP6.72□□□□□ -1.33
LBR-208ENST00000488632 ABCB7O75027 752 aa6.68□□□□□ -1.34
LBR-208ENST00000488632 MYCNP04198 464 aaPredicted RBP6.68□□□□□ -1.34
LBR-208ENST00000488632 SLC4A1APQ9BWU0 796 aaKnown RBP6.64□□□□□ -1.35
LBR-208ENST00000488632 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
LBR-208ENST00000488632 POTEHQ6S545 545 aa6.57□□□□□ -1.36
LBR-208ENST00000488632 RBM42Q9BTD8 480 aaKnown RBP6.53□□□□□ -1.36
LBR-208ENST00000488632 POLA2Q14181 598 aa6.52□□□□□ -1.37
LBR-208ENST00000488632 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
LBR-208ENST00000488632 ZBTB22O15209 634 aa6.48□□□□□ -1.37
LBR-208ENST00000488632 ZBTB12Q9Y330 459 aaPredicted RBP6.45□□□□□ -1.38
LBR-208ENST00000488632 ATXN8OSP0DMR3 200 aa6.39□□□□□ -1.39
LBR-208ENST00000488632 CHRDL2Q6WN34 429 aa6.38□□□□□ -1.39
LBR-208ENST00000488632 OSCARQ8IYS5 282 aa6.36□□□□□ -1.39
LBR-208ENST00000488632 AKT1S1Q96B36 256 aa6.36□□□□□ -1.39
LBR-208ENST00000488632 REM2Q8IYK8 340 aaPredicted RBP6.29□□□□□ -1.4
LBR-208ENST00000488632 FBLN2P98095 1184 aa6.26□□□□□ -1.41
LBR-208ENST00000488632 PITPNM1O00562 1244 aa6.24□□□□□ -1.41
LBR-208ENST00000488632 SPDYE2BA6NHP3 402 aa6.23□□□□□ -1.41
LBR-208ENST00000488632 SPDYE6P0CI01 402 aa6.23□□□□□ -1.41
LBR-208ENST00000488632 SPDYE2Q495Y8 402 aa6.23□□□□□ -1.41
LBR-208ENST00000488632 PIP4P2Q8N4L2 257 aa6.23□□□□□ -1.41
LBR-208ENST00000488632 MKRN4PQ13434 485 aaPredicted RBP6.2□□□□□ -1.42
LBR-208ENST00000488632 FXR2P51116 673 aaKnown RBP eCLIP6.18□□□□□ -1.42
LBR-208ENST00000488632 SP7Q8TDD2 431 aaPredicted RBP6.16□□□□□ -1.42
LBR-208ENST00000488632 SSUH2Q9Y2M2 353 aa6.16□□□□□ -1.42
LBR-208ENST00000488632 CSRNP3Q8WYN3 585 aa6.13□□□□□ -1.43
LBR-208ENST00000488632 SPDYE1Q8NFV5 336 aaPredicted RBP6.12□□□□□ -1.43
LBR-208ENST00000488632 ZNF692Q9BU19 519 aaPredicted RBP6.12□□□□□ -1.43
LBR-208ENST00000488632 HAX1O00165 279 aa6.08□□□□□ -1.44
LBR-208ENST00000488632 CLEC11AQ9Y240 323 aa6.08□□□□□ -1.44
LBR-208ENST00000488632 PRKAR2AP13861 404 aaKnown RBP6.06□□□□□ -1.44
LBR-208ENST00000488632 PABPN1Q86U42 306 aaKnown RBP eCLIP6.04□□□□□ -1.44
LBR-208ENST00000488632 EHMT2Q96KQ7 1210 aa6.04□□□□□ -1.44
LBR-208ENST00000488632 EVX2Q03828 476 aa6.01□□□□□ -1.45
LBR-208ENST00000488632 C19orf67A6NJJ6 358 aa5.99□□□□□ -1.45
LBR-208ENST00000488632 PRR29P0C7W0 189 aa5.98□□□□□ -1.45
LBR-208ENST00000488632 CHADLQ6NUI6 762 aa5.97□□□□□ -1.45
LBR-208ENST00000488632 SPDYE4A6NLX3 237 aa5.9□□□□□ -1.46
LBR-208ENST00000488632 GABBR2O75899 941 aa5.89□□□□□ -1.47
LBR-208ENST00000488632 FARP1Q9Y4F1 1045 aaPredicted RBP5.89□□□□□ -1.47
LBR-208ENST00000488632 CD44P16070 742 aaKnown RBP5.88□□□□□ -1.47
LBR-208ENST00000488632 STAG3Q9UJ98 1225 aa5.87□□□□□ -1.47
LBR-208ENST00000488632 CREBZFQ9NS37 354 aa5.85□□□□□ -1.47
LBR-208ENST00000488632 CLCN6P51797 869 aa5.81□□□□□ -1.48
LBR-208ENST00000488632 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
LBR-208ENST00000488632 PROM2Q8N271 834 aa5.79□□□□□ -1.48
LBR-208ENST00000488632 ZRANB1Q9UGI0 708 aa5.78□□□□□ -1.48
LBR-208ENST00000488632 POTEIP0CG38 1075 aa5.77□□□□□ -1.49
LBR-208ENST00000488632 MNX1P50219 401 aaPredicted RBP5.75□□□□□ -1.49
LBR-208ENST00000488632 LHX8Q68G74 356 aa5.75□□□□□ -1.49
LBR-208ENST00000488632 PAK3O75914 559 aaPredicted RBP5.74□□□□□ -1.49
LBR-208ENST00000488632 NPM1P06748 294 aaKnown RBP eCLIP5.74□□□□□ -1.49
LBR-208ENST00000488632 DCBLD2Q96PD2 775 aa5.72□□□□□ -1.49
LBR-208ENST00000488632 GALR2O43603 387 aaPredicted RBP5.71□□□□□ -1.5
LBR-208ENST00000488632 PHF12Q96QT6 1004 aa5.7□□□□□ -1.5
LBR-208ENST00000488632 MS4A3Q96HJ5 214 aa5.64□□□□□ -1.51
LBR-208ENST00000488632 PLEKHG5O94827 1062 aa5.62□□□□□ -1.51
LBR-208ENST00000488632 CCDC61Q9Y6R9 512 aa5.62□□□□□ -1.51
LBR-208ENST00000488632 ASTLQ6HA08 431 aaPredicted RBP5.61□□□□□ -1.51
LBR-208ENST00000488632 TSPYL2Q9H2G4 693 aaPredicted RBP5.61□□□□□ -1.51
LBR-208ENST00000488632 PELP1Q8IZL8 1130 aaKnown RBP5.59□□□□□ -1.51
LBR-208ENST00000488632 MIER1Q8N108 512 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms