Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AC068587.6-202ENST00000641839 5619 ntBASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AC026396.1-201ENST00000419388 421 ntBASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AL020989.1-201ENST00000422979 469 ntBASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 FAM197Y8-203ENST00000450145 560 ntBASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AL662844.1-201ENST00000546340 181 ntBASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AC132938.5-201ENST00000624980 1813 ntBASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AP4B1Q9Y6B7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 PRYP5-201ENST00000451909 266 ntBASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AF186996.4-201ENST00000467186 377 ntBASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AC073648.2-201ENST00000510116 352 ntBASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 STK19B-204ENST00000512515 211 ntBASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms