RNA–Protein interactions for RNA: ENST00000333991.5

APAF1-201, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5 BASIC

Gene APAF1, Length 4,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-201ENST00000333991 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.93
APAF1-201ENST00000333991 DCAF8L2P0C7V8 631 aa27.09■■□□□ 1.93
APAF1-201ENST00000333991 PELP1Q8IZL8 1130 aaKnown RBP25.48■■□□□ 1.67
APAF1-201ENST00000333991 SHROOM4Q9ULL8 1493 aa25.38■■□□□ 1.65
APAF1-201ENST00000333991 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
APAF1-201ENST00000333991 MYT1Q01538 1121 aa25.13■■□□□ 1.61
APAF1-201ENST00000333991 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
APAF1-201ENST00000333991 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
APAF1-201ENST00000333991 HRCP23327 699 aa24.17■■□□□ 1.46
APAF1-201ENST00000333991 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.42
APAF1-201ENST00000333991 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
APAF1-201ENST00000333991 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
APAF1-201ENST00000333991 ABCC9O60706 1549 aa23.65■■□□□ 1.38
APAF1-201ENST00000333991 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
APAF1-201ENST00000333991 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
APAF1-201ENST00000333991 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
APAF1-201ENST00000333991 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
APAF1-201ENST00000333991 TTBK1Q5TCY1 1321 aaPredicted RBP23.3■■□□□ 1.32
APAF1-201ENST00000333991 APLP2Q06481 763 aa23.21■■□□□ 1.31
APAF1-201ENST00000333991 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
APAF1-201ENST00000333991 ERICH6Q7L0X2 663 aa23.07■■□□□ 1.28
APAF1-201ENST00000333991 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.28
APAF1-201ENST00000333991 CCER1Q8TC90 406 aaPredicted RBP22.96■■□□□ 1.27
APAF1-201ENST00000333991 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
APAF1-201ENST00000333991 YTHDC1Q96MU7 727 aaKnown RBP22.92■■□□□ 1.26
APAF1-201ENST00000333991 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
APAF1-201ENST00000333991 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
APAF1-201ENST00000333991 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
APAF1-201ENST00000333991 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
APAF1-201ENST00000333991 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
APAF1-201ENST00000333991 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
APAF1-201ENST00000333991 NEFLP07196 543 aa22.54■■□□□ 1.2
APAF1-201ENST00000333991 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
APAF1-201ENST00000333991 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
APAF1-201ENST00000333991 NEUROD1Q13562 356 aa22.31■■□□□ 1.16
APAF1-201ENST00000333991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
APAF1-201ENST00000333991 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
APAF1-201ENST00000333991 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
APAF1-201ENST00000333991 ITGAEP38570 1179 aa22.19■■□□□ 1.14
APAF1-201ENST00000333991 BCL11AQ9H165 835 aa22.07■■□□□ 1.12
APAF1-201ENST00000333991 FBLN2P98095 1184 aa22.06■■□□□ 1.12
APAF1-201ENST00000333991 MYT1LQ9UL68 1186 aa21.98■■□□□ 1.11
APAF1-201ENST00000333991 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
APAF1-201ENST00000333991 ANP32EQ9BTT0 268 aa21.96■■□□□ 1.11
APAF1-201ENST00000333991 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
APAF1-201ENST00000333991 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
APAF1-201ENST00000333991 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
APAF1-201ENST00000333991 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
APAF1-201ENST00000333991 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
APAF1-201ENST00000333991 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
APAF1-201ENST00000333991 BCANQ96GW7 911 aa21.79■■□□□ 1.08
APAF1-201ENST00000333991 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
APAF1-201ENST00000333991 NACADO15069 1562 aa21.72■■□□□ 1.07
APAF1-201ENST00000333991 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
APAF1-201ENST00000333991 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
APAF1-201ENST00000333991 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
APAF1-201ENST00000333991 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
APAF1-201ENST00000333991 DAXXQ9UER7 740 aaPredicted RBP21.52■■□□□ 1.04
APAF1-201ENST00000333991 EIF5BO60841 1220 aaKnown RBP21.48■■□□□ 1.03
APAF1-201ENST00000333991 POLR3GLQ9BT43 218 aa21.47■■□□□ 1.03
APAF1-201ENST00000333991 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
APAF1-201ENST00000333991 FKBP8Q14318 412 aa21.39■■□□□ 1.02
APAF1-201ENST00000333991 TRIM52Q96A61 297 aa21.39■■□□□ 1.01
APAF1-201ENST00000333991 GLIPR1L2Q4G1C9 344 aa21.36■■□□□ 1.01
APAF1-201ENST00000333991 MIER1Q8N108 512 aa21.36■■□□□ 1.01
APAF1-201ENST00000333991 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
APAF1-201ENST00000333991 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
APAF1-201ENST00000333991 ZNF777Q9ULD5 760 aaPredicted RBP21.28■■□□□ 1
APAF1-201ENST00000333991 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
APAF1-201ENST00000333991 ANP32AP39687 249 aaKnown RBP21.22■□□□□ 0.99
APAF1-201ENST00000333991 SUPT16HQ9Y5B9 1047 aaKnown RBP21.2■□□□□ 0.98
APAF1-201ENST00000333991 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
APAF1-201ENST00000333991 NBR1Q14596 966 aa21.15■□□□□ 0.98
APAF1-201ENST00000333991 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
APAF1-201ENST00000333991 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
APAF1-201ENST00000333991 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
APAF1-201ENST00000333991 ANP32CO43423 234 aa21.1■□□□□ 0.97
APAF1-201ENST00000333991 PRKCSHP14314 528 aaPredicted RBP21.09■□□□□ 0.97
APAF1-201ENST00000333991 TSHZ2Q9NRE2 1034 aa21.07■□□□□ 0.96
APAF1-201ENST00000333991 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
APAF1-201ENST00000333991 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
APAF1-201ENST00000333991 DEKP35659 375 aaKnown RBP20.98■□□□□ 0.95
APAF1-201ENST00000333991 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
APAF1-201ENST00000333991 ZBTB47Q9UFB7 747 aaPredicted RBP20.97■□□□□ 0.95
APAF1-201ENST00000333991 CHIC2Q9UKJ5 165 aa20.96■□□□□ 0.95
APAF1-201ENST00000333991 RBM19Q9Y4C8 960 aaKnown RBP20.95■□□□□ 0.94
APAF1-201ENST00000333991 CLIP1P30622 1438 aa20.91■□□□□ 0.94
APAF1-201ENST00000333991 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
APAF1-201ENST00000333991 KCNH8Q96L42 1107 aa20.88■□□□□ 0.93
APAF1-201ENST00000333991 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
APAF1-201ENST00000333991 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
APAF1-201ENST00000333991 RTN4Q9NQC3 1192 aaKnown RBP20.83■□□□□ 0.93
APAF1-201ENST00000333991 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
APAF1-201ENST00000333991 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
APAF1-201ENST00000333991 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
APAF1-201ENST00000333991 SOGA1O94964 1423 aa20.8■□□□□ 0.92
APAF1-201ENST00000333991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.912e-12■■■■■ 39
APAF1-201ENST00000333991 EEA1Q15075 1411 aa20.76■□□□□ 0.91
APAF1-201ENST00000333991 WIZO95785 1651 aa20.76■□□□□ 0.91
APAF1-201ENST00000333991 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms