RNA–Protein interactions for RNA: ENST00000398165.7

CBS-204, Transcript of cystathionine-beta-synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBS, Length 2,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBS-204ENST00000398165 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
CBS-204ENST00000398165 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
CBS-204ENST00000398165 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
CBS-204ENST00000398165 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
CBS-204ENST00000398165 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
CBS-204ENST00000398165 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.87
CBS-204ENST00000398165 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
CBS-204ENST00000398165 ABCC9O60706 1549 aa26.29■■□□□ 1.8
CBS-204ENST00000398165 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
CBS-204ENST00000398165 MYO15BQ96JP2 1530 aa26.16■■□□□ 1.78
CBS-204ENST00000398165 NACADO15069 1562 aa25.86■■□□□ 1.73
CBS-204ENST00000398165 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
CBS-204ENST00000398165 HRCP23327 699 aa25.71■■□□□ 1.71
CBS-204ENST00000398165 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
CBS-204ENST00000398165 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
CBS-204ENST00000398165 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.64
CBS-204ENST00000398165 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
CBS-204ENST00000398165 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.63
CBS-204ENST00000398165 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.61
CBS-204ENST00000398165 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
CBS-204ENST00000398165 PELP1Q8IZL8 1130 aaKnown RBP25.01■■□□□ 1.59
CBS-204ENST00000398165 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
CBS-204ENST00000398165 WIZO95785 1651 aa24.95■■□□□ 1.59
CBS-204ENST00000398165 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.58
CBS-204ENST00000398165 PPARGC1BQ86YN6 1023 aaKnown RBP24.94■■□□□ 1.58
CBS-204ENST00000398165 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
CBS-204ENST00000398165 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
CBS-204ENST00000398165 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
CBS-204ENST00000398165 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
CBS-204ENST00000398165 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
CBS-204ENST00000398165 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
CBS-204ENST00000398165 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
CBS-204ENST00000398165 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
CBS-204ENST00000398165 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
CBS-204ENST00000398165 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
CBS-204ENST00000398165 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
CBS-204ENST00000398165 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
CBS-204ENST00000398165 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
CBS-204ENST00000398165 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
CBS-204ENST00000398165 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
CBS-204ENST00000398165 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.46
CBS-204ENST00000398165 MYT1Q01538 1121 aa24.13■■□□□ 1.45
CBS-204ENST00000398165 EEA1Q15075 1411 aa24.12■■□□□ 1.45
CBS-204ENST00000398165 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
CBS-204ENST00000398165 SOGA1O94964 1423 aa24.09■■□□□ 1.45
CBS-204ENST00000398165 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
CBS-204ENST00000398165 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
CBS-204ENST00000398165 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
CBS-204ENST00000398165 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
CBS-204ENST00000398165 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
CBS-204ENST00000398165 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
CBS-204ENST00000398165 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
CBS-204ENST00000398165 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
CBS-204ENST00000398165 KIF21BO75037 1637 aa23.85■■□□□ 1.41
CBS-204ENST00000398165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.41
CBS-204ENST00000398165 CCER1Q8TC90 406 aaPredicted RBP23.8■■□□□ 1.4
CBS-204ENST00000398165 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
CBS-204ENST00000398165 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
CBS-204ENST00000398165 ACIN1Q9UKV3 1341 aaKnown RBP23.73■■□□□ 1.39
CBS-204ENST00000398165 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
CBS-204ENST00000398165 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
CBS-204ENST00000398165 TOP2BQ02880 1626 aa23.64■■□□□ 1.37
CBS-204ENST00000398165 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
CBS-204ENST00000398165 CLIP1P30622 1438 aa23.59■■□□□ 1.37
CBS-204ENST00000398165 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
CBS-204ENST00000398165 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
CBS-204ENST00000398165 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
CBS-204ENST00000398165 CENPBP07199 599 aaPredicted RBP23.49■■□□□ 1.35
CBS-204ENST00000398165 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
CBS-204ENST00000398165 CFTRP13569 1480 aa23.45■■□□□ 1.34
CBS-204ENST00000398165 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
CBS-204ENST00000398165 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.34
CBS-204ENST00000398165 PRXQ9BXM0 1461 aa23.37■■□□□ 1.33
CBS-204ENST00000398165 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
CBS-204ENST00000398165 CUX1P39880 1505 aa23.34■■□□□ 1.33
CBS-204ENST00000398165 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
CBS-204ENST00000398165 APLP2Q06481 763 aa23.28■■□□□ 1.32
CBS-204ENST00000398165 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
CBS-204ENST00000398165 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
CBS-204ENST00000398165 ZNF316A6NFI3 1004 aaPredicted RBP23.25■■□□□ 1.31
CBS-204ENST00000398165 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
CBS-204ENST00000398165 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
CBS-204ENST00000398165 NESP48681 1621 aa23.16■■□□□ 1.3
CBS-204ENST00000398165 RANGAP1P46060 587 aaPredicted RBP23.15■■□□□ 1.3
CBS-204ENST00000398165 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
CBS-204ENST00000398165 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
CBS-204ENST00000398165 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
CBS-204ENST00000398165 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
CBS-204ENST00000398165 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
CBS-204ENST00000398165 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
CBS-204ENST00000398165 DHX57Q6P158 1386 aaKnown RBP22.97■■□□□ 1.27
CBS-204ENST00000398165 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
CBS-204ENST00000398165 CUX2O14529 1486 aa22.95■■□□□ 1.26
CBS-204ENST00000398165 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
CBS-204ENST00000398165 IGF1RP08069 1367 aa22.92■■□□□ 1.26
CBS-204ENST00000398165 TOPBP1Q92547 1522 aa22.89■■□□□ 1.25
CBS-204ENST00000398165 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
CBS-204ENST00000398165 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
CBS-204ENST00000398165 MIER1Q8N108 512 aa22.87■■□□□ 1.25
CBS-204ENST00000398165 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms