RNA–Protein interactions for RNA: ENST00000272454.10

RGPD5-202, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2 BASIC

Gene RGPD5, Length 2,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-202ENST00000272454 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
RGPD5-202ENST00000272454 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
RGPD5-202ENST00000272454 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
RGPD5-202ENST00000272454 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
RGPD5-202ENST00000272454 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.74
RGPD5-202ENST00000272454 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
RGPD5-202ENST00000272454 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
RGPD5-202ENST00000272454 HRCP23327 699 aa25.77■■□□□ 1.72
RGPD5-202ENST00000272454 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
RGPD5-202ENST00000272454 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
RGPD5-202ENST00000272454 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
RGPD5-202ENST00000272454 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
RGPD5-202ENST00000272454 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
RGPD5-202ENST00000272454 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
RGPD5-202ENST00000272454 TRIM26Q12899 539 aaPredicted RBP24.85■■□□□ 1.57
RGPD5-202ENST00000272454 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
RGPD5-202ENST00000272454 EHMT2Q96KQ7 1210 aa24.68■■□□□ 1.54
RGPD5-202ENST00000272454 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
RGPD5-202ENST00000272454 ABCC9O60706 1549 aa24.57■■□□□ 1.52
RGPD5-202ENST00000272454 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
RGPD5-202ENST00000272454 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
RGPD5-202ENST00000272454 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
RGPD5-202ENST00000272454 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.48
RGPD5-202ENST00000272454 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
RGPD5-202ENST00000272454 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
RGPD5-202ENST00000272454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
RGPD5-202ENST00000272454 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
RGPD5-202ENST00000272454 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
RGPD5-202ENST00000272454 MYT1Q01538 1121 aa23.93■■□□□ 1.42
RGPD5-202ENST00000272454 CCER1Q8TC90 406 aaPredicted RBP23.88■■□□□ 1.41
RGPD5-202ENST00000272454 WIZO95785 1651 aa23.88■■□□□ 1.41
RGPD5-202ENST00000272454 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
RGPD5-202ENST00000272454 NACADO15069 1562 aa23.67■■□□□ 1.38
RGPD5-202ENST00000272454 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
RGPD5-202ENST00000272454 DIEXFQ68CQ4 756 aaKnown RBP23.6■■□□□ 1.37
RGPD5-202ENST00000272454 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
RGPD5-202ENST00000272454 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
RGPD5-202ENST00000272454 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
RGPD5-202ENST00000272454 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
RGPD5-202ENST00000272454 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
RGPD5-202ENST00000272454 SOGA1O94964 1423 aa23.49■■□□□ 1.35
RGPD5-202ENST00000272454 CEP162Q5TB80 1403 aa23.48■■□□□ 1.35
RGPD5-202ENST00000272454 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
RGPD5-202ENST00000272454 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
RGPD5-202ENST00000272454 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
RGPD5-202ENST00000272454 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
RGPD5-202ENST00000272454 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
RGPD5-202ENST00000272454 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
RGPD5-202ENST00000272454 TNIKQ9UKE5 1360 aa23.31■■□□□ 1.32
RGPD5-202ENST00000272454 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
RGPD5-202ENST00000272454 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
RGPD5-202ENST00000272454 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
RGPD5-202ENST00000272454 ZNF316A6NFI3 1004 aaPredicted RBP23.26■■□□□ 1.31
RGPD5-202ENST00000272454 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
RGPD5-202ENST00000272454 RANGAP1P46060 587 aaPredicted RBP23.15■■□□□ 1.3
RGPD5-202ENST00000272454 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.3
RGPD5-202ENST00000272454 MIER1Q8N108 512 aa23.12■■□□□ 1.29
RGPD5-202ENST00000272454 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
RGPD5-202ENST00000272454 EEA1Q15075 1411 aa23.07■■□□□ 1.28
RGPD5-202ENST00000272454 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
RGPD5-202ENST00000272454 CLIP1P30622 1438 aa22.96■■□□□ 1.27
RGPD5-202ENST00000272454 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
RGPD5-202ENST00000272454 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.26
RGPD5-202ENST00000272454 APLP2Q06481 763 aa22.88■■□□□ 1.25
RGPD5-202ENST00000272454 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
RGPD5-202ENST00000272454 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.25
RGPD5-202ENST00000272454 KIF21BO75037 1637 aa22.77■■□□□ 1.24
RGPD5-202ENST00000272454 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
RGPD5-202ENST00000272454 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
RGPD5-202ENST00000272454 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
RGPD5-202ENST00000272454 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
RGPD5-202ENST00000272454 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
RGPD5-202ENST00000272454 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
RGPD5-202ENST00000272454 ITGAEP38570 1179 aa22.56■■□□□ 1.2
RGPD5-202ENST00000272454 ARAP1Q96P48 1450 aa22.51■■□□□ 1.19
RGPD5-202ENST00000272454 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
RGPD5-202ENST00000272454 SUPT16HQ9Y5B9 1047 aaKnown RBP22.47■■□□□ 1.19
RGPD5-202ENST00000272454 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
RGPD5-202ENST00000272454 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
RGPD5-202ENST00000272454 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
RGPD5-202ENST00000272454 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
RGPD5-202ENST00000272454 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
RGPD5-202ENST00000272454 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
RGPD5-202ENST00000272454 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
RGPD5-202ENST00000272454 CCNB3Q8WWL7 1395 aa22.31■■□□□ 1.16
RGPD5-202ENST00000272454 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
RGPD5-202ENST00000272454 CUX1P39880 1505 aa22.27■■□□□ 1.16
RGPD5-202ENST00000272454 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
RGPD5-202ENST00000272454 BCANQ96GW7 911 aa22.24■■□□□ 1.15
RGPD5-202ENST00000272454 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
RGPD5-202ENST00000272454 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
RGPD5-202ENST00000272454 TSHZ2Q9NRE2 1034 aa22.23■■□□□ 1.15
RGPD5-202ENST00000272454 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
RGPD5-202ENST00000272454 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
RGPD5-202ENST00000272454 HIRIP3Q9BW71 556 aaPredicted RBP22.17■■□□□ 1.14
RGPD5-202ENST00000272454 CUX2O14529 1486 aa22.16■■□□□ 1.14
RGPD5-202ENST00000272454 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.13
RGPD5-202ENST00000272454 MAPKBP1O60336 1514 aa22.13■■□□□ 1.13
RGPD5-202ENST00000272454 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
RGPD5-202ENST00000272454 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms