RNA–Protein interactions for RNA: ENST00000303622.13

MARK3-202, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MARK3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-202ENST00000303622 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
MARK3-202ENST00000303622 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
MARK3-202ENST00000303622 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
MARK3-202ENST00000303622 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.78
MARK3-202ENST00000303622 PCGF6Q9BYE7 350 aa25.72■■□□□ 1.71
MARK3-202ENST00000303622 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
MARK3-202ENST00000303622 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
MARK3-202ENST00000303622 HRCP23327 699 aa25.6■■□□□ 1.69
MARK3-202ENST00000303622 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
MARK3-202ENST00000303622 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.67
MARK3-202ENST00000303622 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
MARK3-202ENST00000303622 EHMT2Q96KQ7 1210 aa24.98■■□□□ 1.59
MARK3-202ENST00000303622 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
MARK3-202ENST00000303622 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.57
MARK3-202ENST00000303622 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
MARK3-202ENST00000303622 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
MARK3-202ENST00000303622 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
MARK3-202ENST00000303622 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
MARK3-202ENST00000303622 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
MARK3-202ENST00000303622 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
MARK3-202ENST00000303622 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
MARK3-202ENST00000303622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
MARK3-202ENST00000303622 ABCC9O60706 1549 aa24.04■■□□□ 1.44
MARK3-202ENST00000303622 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
MARK3-202ENST00000303622 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
MARK3-202ENST00000303622 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
MARK3-202ENST00000303622 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
MARK3-202ENST00000303622 NEUROD1Q13562 356 aa23.64■■□□□ 1.37
MARK3-202ENST00000303622 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
MARK3-202ENST00000303622 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
MARK3-202ENST00000303622 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.36
MARK3-202ENST00000303622 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
MARK3-202ENST00000303622 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
MARK3-202ENST00000303622 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
MARK3-202ENST00000303622 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
MARK3-202ENST00000303622 WIZO95785 1651 aa23.48■■□□□ 1.35
MARK3-202ENST00000303622 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
MARK3-202ENST00000303622 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
MARK3-202ENST00000303622 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
MARK3-202ENST00000303622 ABCC8Q09428 1581 aa23.33■■□□□ 1.32
MARK3-202ENST00000303622 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
MARK3-202ENST00000303622 SOGA1O94964 1423 aa23.27■■□□□ 1.32
MARK3-202ENST00000303622 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
MARK3-202ENST00000303622 CSRNP3Q8WYN3 585 aa23.2■■□□□ 1.3
MARK3-202ENST00000303622 NACADO15069 1562 aa23.18■■□□□ 1.3
MARK3-202ENST00000303622 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
MARK3-202ENST00000303622 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
MARK3-202ENST00000303622 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
MARK3-202ENST00000303622 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
MARK3-202ENST00000303622 MIER1Q8N108 512 aa23.06■■□□□ 1.28
MARK3-202ENST00000303622 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
MARK3-202ENST00000303622 APLP2Q06481 763 aa22.99■■□□□ 1.27
MARK3-202ENST00000303622 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
MARK3-202ENST00000303622 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
MARK3-202ENST00000303622 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
MARK3-202ENST00000303622 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
MARK3-202ENST00000303622 GOLGA3Q08378 1498 aa22.81■■□□□ 1.24
MARK3-202ENST00000303622 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
MARK3-202ENST00000303622 CLIP1P30622 1438 aa22.76■■□□□ 1.23
MARK3-202ENST00000303622 ITGAEP38570 1179 aa22.73■■□□□ 1.23
MARK3-202ENST00000303622 EEA1Q15075 1411 aa22.71■■□□□ 1.23
MARK3-202ENST00000303622 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
MARK3-202ENST00000303622 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
MARK3-202ENST00000303622 VPS8Q8N3P4 1428 aa22.55■■□□□ 1.2
MARK3-202ENST00000303622 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
MARK3-202ENST00000303622 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
MARK3-202ENST00000303622 KCNH8Q96L42 1107 aa22.39■■□□□ 1.18
MARK3-202ENST00000303622 BCANQ96GW7 911 aa22.39■■□□□ 1.17
MARK3-202ENST00000303622 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
MARK3-202ENST00000303622 SUPT16HQ9Y5B9 1047 aaKnown RBP22.37■■□□□ 1.17
MARK3-202ENST00000303622 MYT1Q01538 1121 aa22.37■■□□□ 1.17
MARK3-202ENST00000303622 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
MARK3-202ENST00000303622 KIF21BO75037 1637 aa22.36■■□□□ 1.17
MARK3-202ENST00000303622 ATP1B4Q9UN42 357 aaPredicted RBP22.34■■□□□ 1.17
MARK3-202ENST00000303622 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
MARK3-202ENST00000303622 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
MARK3-202ENST00000303622 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
MARK3-202ENST00000303622 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
MARK3-202ENST00000303622 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
MARK3-202ENST00000303622 DDX10Q13206 875 aaKnown RBP22.21■■□□□ 1.15
MARK3-202ENST00000303622 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
MARK3-202ENST00000303622 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
MARK3-202ENST00000303622 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
MARK3-202ENST00000303622 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
MARK3-202ENST00000303622 CCNB3Q8WWL7 1395 aa22.13■■□□□ 1.13
MARK3-202ENST00000303622 TSHZ2Q9NRE2 1034 aa22.11■■□□□ 1.13
MARK3-202ENST00000303622 FKBP8Q14318 412 aa22.09■■□□□ 1.13
MARK3-202ENST00000303622 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
MARK3-202ENST00000303622 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
MARK3-202ENST00000303622 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
MARK3-202ENST00000303622 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
MARK3-202ENST00000303622 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
MARK3-202ENST00000303622 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
MARK3-202ENST00000303622 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
MARK3-202ENST00000303622 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
MARK3-202ENST00000303622 CUX1P39880 1505 aa21.9■■□□□ 1.1
MARK3-202ENST00000303622 NEFLP07196 543 aa21.89■■□□□ 1.09
MARK3-202ENST00000303622 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
MARK3-202ENST00000303622 CUX2O14529 1486 aa21.85■■□□□ 1.09
MARK3-202ENST00000303622 PHLDB1Q86UU1 1377 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms