RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 NISCHQ9Y2I1 1504 aa41.86■■■■■ 4.29
SWSAP1-201ENST00000312423 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
SWSAP1-201ENST00000312423 ABCC9O60706 1549 aa36.09■■■■□ 3.37
SWSAP1-201ENST00000312423 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
SWSAP1-201ENST00000312423 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
SWSAP1-201ENST00000312423 NACADO15069 1562 aa34.81■■■■□ 3.16
SWSAP1-201ENST00000312423 RB1CC1Q8TDY2 1594 aa34.81■■■■□ 3.16
SWSAP1-201ENST00000312423 MYO15BQ96JP2 1530 aa34.63■■■■□ 3.13
SWSAP1-201ENST00000312423 DCAF1Q9Y4B6 1507 aa34.6■■■■□ 3.13
SWSAP1-201ENST00000312423 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
SWSAP1-201ENST00000312423 SCRIBQ14160 1630 aa33.95■■■■□ 3.03
SWSAP1-201ENST00000312423 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
SWSAP1-201ENST00000312423 BICRAQ9NZM4 1560 aa33.71■■■□□ 2.99
SWSAP1-201ENST00000312423 SHROOM4Q9ULL8 1493 aa33.35■■■□□ 2.93
SWSAP1-201ENST00000312423 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
SWSAP1-201ENST00000312423 DNAJC5BQ9UF47 199 aa32.78■■■□□ 2.84
SWSAP1-201ENST00000312423 CC2D2AQ9P2K1 1620 aa32.64■■■□□ 2.82
SWSAP1-201ENST00000312423 CECR2Q9BXF3 1484 aa32.6■■■□□ 2.81
SWSAP1-201ENST00000312423 SMARCA4P51532 1647 aa32.45■■■□□ 2.79
SWSAP1-201ENST00000312423 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.79
SWSAP1-201ENST00000312423 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
SWSAP1-201ENST00000312423 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
SWSAP1-201ENST00000312423 SMARCA2P51531 1590 aa32.17■■■□□ 2.74
SWSAP1-201ENST00000312423 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
SWSAP1-201ENST00000312423 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
SWSAP1-201ENST00000312423 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
SWSAP1-201ENST00000312423 WIZO95785 1651 aa31.99■■■□□ 2.71
SWSAP1-201ENST00000312423 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
SWSAP1-201ENST00000312423 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
SWSAP1-201ENST00000312423 TOP2AP11388 1531 aaKnown RBP31.64■■■□□ 2.66
SWSAP1-201ENST00000312423 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
SWSAP1-201ENST00000312423 NESP48681 1621 aa31.3■■■□□ 2.6
SWSAP1-201ENST00000312423 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
SWSAP1-201ENST00000312423 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
SWSAP1-201ENST00000312423 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
SWSAP1-201ENST00000312423 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
SWSAP1-201ENST00000312423 CFTRP13569 1480 aa31.06■■■□□ 2.56
SWSAP1-201ENST00000312423 PDS5BQ9NTI5 1447 aa31.02■■■□□ 2.56
SWSAP1-201ENST00000312423 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
SWSAP1-201ENST00000312423 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
SWSAP1-201ENST00000312423 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
SWSAP1-201ENST00000312423 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.52
SWSAP1-201ENST00000312423 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
SWSAP1-201ENST00000312423 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
SWSAP1-201ENST00000312423 CUX2O14529 1486 aa30.6■■■□□ 2.49
SWSAP1-201ENST00000312423 WDR62O43379 1518 aa30.57■■■□□ 2.48
SWSAP1-201ENST00000312423 URB2Q14146 1524 aaKnown RBP30.53■■■□□ 2.48
SWSAP1-201ENST00000312423 TOPBP1Q92547 1522 aa30.4■■■□□ 2.46
SWSAP1-201ENST00000312423 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
SWSAP1-201ENST00000312423 DNMBPQ6XZF7 1577 aa30.4■■■□□ 2.46
SWSAP1-201ENST00000312423 CUX1P39880 1505 aa30.28■■■□□ 2.44
SWSAP1-201ENST00000312423 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
SWSAP1-201ENST00000312423 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
SWSAP1-201ENST00000312423 FGD5Q6ZNL6 1462 aa30.15■■■□□ 2.42
SWSAP1-201ENST00000312423 IFT140Q96RY7 1462 aa30.13■■■□□ 2.41
SWSAP1-201ENST00000312423 SYNJ1O43426 1573 aa30.12■■■□□ 2.41
SWSAP1-201ENST00000312423 TOP2BQ02880 1626 aa30.1■■■□□ 2.41
SWSAP1-201ENST00000312423 BIVM-ERCC5R4GMW8 1640 aa30.1■■■□□ 2.41
SWSAP1-201ENST00000312423 SOGA1O94964 1423 aa30.05■■■□□ 2.4
SWSAP1-201ENST00000312423 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
SWSAP1-201ENST00000312423 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
SWSAP1-201ENST00000312423 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
SWSAP1-201ENST00000312423 EIF4G3O43432 1585 aaKnown RBP29.91■■■□□ 2.38
SWSAP1-201ENST00000312423 WDR97A6NE52 1622 aa29.88■■■□□ 2.37
SWSAP1-201ENST00000312423 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
SWSAP1-201ENST00000312423 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.37
SWSAP1-201ENST00000312423 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
SWSAP1-201ENST00000312423 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
SWSAP1-201ENST00000312423 GAPVD1Q14C86 1478 aa29.71■■■□□ 2.35
SWSAP1-201ENST00000312423 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
SWSAP1-201ENST00000312423 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
SWSAP1-201ENST00000312423 GRIN2BQ13224 1484 aa29.66■■■□□ 2.34
SWSAP1-201ENST00000312423 SNAPC4Q5SXM2 1469 aa29.6■■■□□ 2.33
SWSAP1-201ENST00000312423 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
SWSAP1-201ENST00000312423 MAGI1Q96QZ7 1491 aaPredicted RBP29.54■■■□□ 2.32
SWSAP1-201ENST00000312423 FBLN2P98095 1184 aa29.51■■■□□ 2.31
SWSAP1-201ENST00000312423 CHD1O14646 1710 aa29.5■■■□□ 2.31
SWSAP1-201ENST00000312423 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
SWSAP1-201ENST00000312423 ERICH3Q5RHP9 1530 aa29.49■■■□□ 2.31
SWSAP1-201ENST00000312423 SYNJ2O15056 1496 aa29.43■■■□□ 2.3
SWSAP1-201ENST00000312423 CHMP7Q8WUX9 453 aaPredicted RBP29.43■■■□□ 2.3
SWSAP1-201ENST00000312423 ADAMTS12P58397 1594 aa29.42■■■□□ 2.3
SWSAP1-201ENST00000312423 OSCARQ8IYS5 282 aa29.4■■■□□ 2.3
SWSAP1-201ENST00000312423 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
SWSAP1-201ENST00000312423 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
SWSAP1-201ENST00000312423 IGF1RP08069 1367 aa29.35■■■□□ 2.29
SWSAP1-201ENST00000312423 CUL7Q14999 1698 aa29.31■■■□□ 2.28
SWSAP1-201ENST00000312423 DNAJC5Q9H3Z4 198 aa29.31■■■□□ 2.28
SWSAP1-201ENST00000312423 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
SWSAP1-201ENST00000312423 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
SWSAP1-201ENST00000312423 EEA1Q15075 1411 aa29.15■■■□□ 2.26
SWSAP1-201ENST00000312423 FAM9AQ8IZU1 332 aaPredicted RBP29.14■■■□□ 2.26
SWSAP1-201ENST00000312423 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
SWSAP1-201ENST00000312423 CLASP1Q7Z460 1538 aa29.12■■■□□ 2.25
SWSAP1-201ENST00000312423 NUP160Q12769 1436 aa29.11■■■□□ 2.25
SWSAP1-201ENST00000312423 RAPGEF2Q9Y4G8 1499 aa29.08■■■□□ 2.25
SWSAP1-201ENST00000312423 CSRNP3Q8WYN3 585 aa29.08■■■□□ 2.25
SWSAP1-201ENST00000312423 PRXQ9BXM0 1461 aa29.01■■■□□ 2.23
SWSAP1-201ENST00000312423 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
SWSAP1-201ENST00000312423 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms