RNA–Protein interactions for RNA: ENST00000257901.7

KRT85-201, Transcript of keratin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT85, Length 2,447 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT85-201ENST00000257901 NISCHQ9Y2I1 1504 aa32.49■■■□□ 2.79
KRT85-201ENST00000257901 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
KRT85-201ENST00000257901 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
KRT85-201ENST00000257901 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
KRT85-201ENST00000257901 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
KRT85-201ENST00000257901 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
KRT85-201ENST00000257901 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
KRT85-201ENST00000257901 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
KRT85-201ENST00000257901 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
KRT85-201ENST00000257901 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
KRT85-201ENST00000257901 ABCC9O60706 1549 aa25.88■■□□□ 1.73
KRT85-201ENST00000257901 HRCP23327 699 aa25.78■■□□□ 1.72
KRT85-201ENST00000257901 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
KRT85-201ENST00000257901 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
KRT85-201ENST00000257901 NACADO15069 1562 aa25.54■■□□□ 1.68
KRT85-201ENST00000257901 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
KRT85-201ENST00000257901 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
KRT85-201ENST00000257901 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
KRT85-201ENST00000257901 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
KRT85-201ENST00000257901 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
KRT85-201ENST00000257901 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
KRT85-201ENST00000257901 WIZO95785 1651 aa25.19■■□□□ 1.62
KRT85-201ENST00000257901 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.61
KRT85-201ENST00000257901 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
KRT85-201ENST00000257901 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
KRT85-201ENST00000257901 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
KRT85-201ENST00000257901 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
KRT85-201ENST00000257901 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
KRT85-201ENST00000257901 SMARCA4P51532 1647 aa24.76■■□□□ 1.55
KRT85-201ENST00000257901 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
KRT85-201ENST00000257901 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
KRT85-201ENST00000257901 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
KRT85-201ENST00000257901 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
KRT85-201ENST00000257901 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.53
KRT85-201ENST00000257901 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
KRT85-201ENST00000257901 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
KRT85-201ENST00000257901 SCAF1Q9H7N4 1312 aaKnown RBP24.36■■□□□ 1.49
KRT85-201ENST00000257901 SOGA1O94964 1423 aa24.36■■□□□ 1.49
KRT85-201ENST00000257901 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
KRT85-201ENST00000257901 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
KRT85-201ENST00000257901 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
KRT85-201ENST00000257901 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
KRT85-201ENST00000257901 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.45
KRT85-201ENST00000257901 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
KRT85-201ENST00000257901 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
KRT85-201ENST00000257901 CEP162Q5TB80 1403 aa24.09■■□□□ 1.45
KRT85-201ENST00000257901 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
KRT85-201ENST00000257901 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
KRT85-201ENST00000257901 UBTFP17480 764 aaKnown RBP24.04■■□□□ 1.44
KRT85-201ENST00000257901 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
KRT85-201ENST00000257901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.97■■□□□ 1.43
KRT85-201ENST00000257901 EEA1Q15075 1411 aa23.95■■□□□ 1.42
KRT85-201ENST00000257901 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
KRT85-201ENST00000257901 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
KRT85-201ENST00000257901 CCER1Q8TC90 406 aaPredicted RBP23.77■■□□□ 1.4
KRT85-201ENST00000257901 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
KRT85-201ENST00000257901 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
KRT85-201ENST00000257901 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
KRT85-201ENST00000257901 RAPGEF2Q9Y4G8 1499 aa23.73■■□□□ 1.39
KRT85-201ENST00000257901 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
KRT85-201ENST00000257901 KIF21BO75037 1637 aa23.7■■□□□ 1.39
KRT85-201ENST00000257901 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
KRT85-201ENST00000257901 CLIP1P30622 1438 aa23.65■■□□□ 1.38
KRT85-201ENST00000257901 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
KRT85-201ENST00000257901 MYT1Q01538 1121 aa23.62■■□□□ 1.37
KRT85-201ENST00000257901 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
KRT85-201ENST00000257901 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
KRT85-201ENST00000257901 CUX1P39880 1505 aa23.57■■□□□ 1.36
KRT85-201ENST00000257901 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
KRT85-201ENST00000257901 CFTRP13569 1480 aa23.5■■□□□ 1.35
KRT85-201ENST00000257901 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
KRT85-201ENST00000257901 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
KRT85-201ENST00000257901 CENPBP07199 599 aaPredicted RBP23.44■■□□□ 1.34
KRT85-201ENST00000257901 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
KRT85-201ENST00000257901 APLP2Q06481 763 aa23.34■■□□□ 1.33
KRT85-201ENST00000257901 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
KRT85-201ENST00000257901 ARAP1Q96P48 1450 aa23.33■■□□□ 1.33
KRT85-201ENST00000257901 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
KRT85-201ENST00000257901 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
KRT85-201ENST00000257901 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
KRT85-201ENST00000257901 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
KRT85-201ENST00000257901 CUX2O14529 1486 aa23.21■■□□□ 1.31
KRT85-201ENST00000257901 IGF1RP08069 1367 aa23.2■■□□□ 1.3
KRT85-201ENST00000257901 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
KRT85-201ENST00000257901 ARHGAP35Q9NRY4 1499 aa23.16■■□□□ 1.3
KRT85-201ENST00000257901 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
KRT85-201ENST00000257901 NESP48681 1621 aa23.07■■□□□ 1.28
KRT85-201ENST00000257901 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
KRT85-201ENST00000257901 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
KRT85-201ENST00000257901 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
KRT85-201ENST00000257901 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
KRT85-201ENST00000257901 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
KRT85-201ENST00000257901 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
KRT85-201ENST00000257901 P3H3Q8IVL6 736 aa22.98■■□□□ 1.27
KRT85-201ENST00000257901 ITGAEP38570 1179 aa22.94■■□□□ 1.26
KRT85-201ENST00000257901 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
KRT85-201ENST00000257901 RRBP1Q9P2E9 1410 aaKnown RBP22.93■■□□□ 1.26
KRT85-201ENST00000257901 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
KRT85-201ENST00000257901 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
KRT85-201ENST00000257901 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms