RNA–Protein interactions for RNA: ENST00000396698.5

SPEG-205, Transcript of SPEG complex locus, humanhuman

TSL 5 BASIC

Gene SPEG, Length 3,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-205ENST00000396698 NISCHQ9Y2I1 1504 aa29.06■■■□□ 2.24
SPEG-205ENST00000396698 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
SPEG-205ENST00000396698 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
SPEG-205ENST00000396698 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
SPEG-205ENST00000396698 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
SPEG-205ENST00000396698 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
SPEG-205ENST00000396698 HRCP23327 699 aa25.54■■□□□ 1.68
SPEG-205ENST00000396698 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
SPEG-205ENST00000396698 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
SPEG-205ENST00000396698 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
SPEG-205ENST00000396698 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
SPEG-205ENST00000396698 PELP1Q8IZL8 1130 aaKnown RBP24.43■■□□□ 1.5
SPEG-205ENST00000396698 EHMT2Q96KQ7 1210 aa24.41■■□□□ 1.5
SPEG-205ENST00000396698 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
SPEG-205ENST00000396698 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
SPEG-205ENST00000396698 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
SPEG-205ENST00000396698 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.44
SPEG-205ENST00000396698 ABCC9O60706 1549 aa24.01■■□□□ 1.43
SPEG-205ENST00000396698 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
SPEG-205ENST00000396698 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
SPEG-205ENST00000396698 NEUROD1Q13562 356 aa23.77■■□□□ 1.4
SPEG-205ENST00000396698 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
SPEG-205ENST00000396698 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
SPEG-205ENST00000396698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
SPEG-205ENST00000396698 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
SPEG-205ENST00000396698 YTHDC1Q96MU7 727 aaKnown RBP23.6■■□□□ 1.37
SPEG-205ENST00000396698 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
SPEG-205ENST00000396698 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
SPEG-205ENST00000396698 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
SPEG-205ENST00000396698 CENPBP07199 599 aaPredicted RBP23.48■■□□□ 1.35
SPEG-205ENST00000396698 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
SPEG-205ENST00000396698 MYT1Q01538 1121 aa23.34■■□□□ 1.33
SPEG-205ENST00000396698 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
SPEG-205ENST00000396698 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
SPEG-205ENST00000396698 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.27
SPEG-205ENST00000396698 NACADO15069 1562 aa22.94■■□□□ 1.26
SPEG-205ENST00000396698 MIER1Q8N108 512 aa22.85■■□□□ 1.25
SPEG-205ENST00000396698 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
SPEG-205ENST00000396698 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
SPEG-205ENST00000396698 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
SPEG-205ENST00000396698 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
SPEG-205ENST00000396698 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
SPEG-205ENST00000396698 WIZO95785 1651 aa22.6■■□□□ 1.21
SPEG-205ENST00000396698 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
SPEG-205ENST00000396698 BCANQ96GW7 911 aa22.53■■□□□ 1.2
SPEG-205ENST00000396698 BCL11AQ9H165 835 aa22.38■■□□□ 1.17
SPEG-205ENST00000396698 SUPT16HQ9Y5B9 1047 aaKnown RBP22.38■■□□□ 1.17
SPEG-205ENST00000396698 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
SPEG-205ENST00000396698 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
SPEG-205ENST00000396698 ANP32EQ9BTT0 268 aa22.28■■□□□ 1.16
SPEG-205ENST00000396698 TSHZ2Q9NRE2 1034 aa22.26■■□□□ 1.15
SPEG-205ENST00000396698 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
SPEG-205ENST00000396698 APLP2Q06481 763 aa22.18■■□□□ 1.14
SPEG-205ENST00000396698 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
SPEG-205ENST00000396698 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
SPEG-205ENST00000396698 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
SPEG-205ENST00000396698 ABCC8Q09428 1581 aa22.14■■□□□ 1.14
SPEG-205ENST00000396698 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.13
SPEG-205ENST00000396698 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
SPEG-205ENST00000396698 ITGAEP38570 1179 aa22.07■■□□□ 1.12
SPEG-205ENST00000396698 FKBP8Q14318 412 aa22.07■■□□□ 1.12
SPEG-205ENST00000396698 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
SPEG-205ENST00000396698 SOGA1O94964 1423 aa21.99■■□□□ 1.11
SPEG-205ENST00000396698 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
SPEG-205ENST00000396698 BAZ1BQ9UIG0 1483 aaKnown RBP21.89■■□□□ 1.09
SPEG-205ENST00000396698 NEFLP07196 543 aa21.88■■□□□ 1.09
SPEG-205ENST00000396698 TRIM52Q96A61 297 aa21.86■■□□□ 1.09
SPEG-205ENST00000396698 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
SPEG-205ENST00000396698 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
SPEG-205ENST00000396698 ERICH6Q7L0X2 663 aa21.84■■□□□ 1.09
SPEG-205ENST00000396698 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
SPEG-205ENST00000396698 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
SPEG-205ENST00000396698 RBM19Q9Y4C8 960 aaKnown RBP21.82■■□□□ 1.08
SPEG-205ENST00000396698 TNIKQ9UKE5 1360 aa21.81■■□□□ 1.08
SPEG-205ENST00000396698 DDX10Q13206 875 aaKnown RBP21.8■■□□□ 1.08
SPEG-205ENST00000396698 IRX6P78412 446 aaPredicted RBP21.76■■□□□ 1.07
SPEG-205ENST00000396698 CLSPNQ9HAW4 1339 aa21.75■■□□□ 1.07
SPEG-205ENST00000396698 CLIP1P30622 1438 aa21.62■■□□□ 1.05
SPEG-205ENST00000396698 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
SPEG-205ENST00000396698 MSH5O43196 834 aa21.56■■□□□ 1.04
SPEG-205ENST00000396698 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
SPEG-205ENST00000396698 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
SPEG-205ENST00000396698 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
SPEG-205ENST00000396698 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
SPEG-205ENST00000396698 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
SPEG-205ENST00000396698 NBR1Q14596 966 aa21.47■■□□□ 1.03
SPEG-205ENST00000396698 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
SPEG-205ENST00000396698 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
SPEG-205ENST00000396698 CDK11AQ9UQ88 783 aaPredicted RBP21.43■■□□□ 1.02
SPEG-205ENST00000396698 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
SPEG-205ENST00000396698 ANP32CO43423 234 aa21.42■■□□□ 1.02
SPEG-205ENST00000396698 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
SPEG-205ENST00000396698 VPS8Q8N3P4 1428 aa21.39■■□□□ 1.01
SPEG-205ENST00000396698 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
SPEG-205ENST00000396698 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
SPEG-205ENST00000396698 FAM50AQ14320 339 aaKnown RBP21.35■■□□□ 1.01
SPEG-205ENST00000396698 PRKCSHP14314 528 aaPredicted RBP21.32■■□□□ 1
SPEG-205ENST00000396698 DEKP35659 375 aaKnown RBP21.32■■□□□ 1
SPEG-205ENST00000396698 EEA1Q15075 1411 aa21.31■■□□□ 1
SPEG-205ENST00000396698 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms