RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.26
SH2D3C-206ENST00000429553 HRCP23327 699 aa25.82■■□□□ 1.72
SH2D3C-206ENST00000429553 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
SH2D3C-206ENST00000429553 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
SH2D3C-206ENST00000429553 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
SH2D3C-206ENST00000429553 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
SH2D3C-206ENST00000429553 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
SH2D3C-206ENST00000429553 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
SH2D3C-206ENST00000429553 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
SH2D3C-206ENST00000429553 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
SH2D3C-206ENST00000429553 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
SH2D3C-206ENST00000429553 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
SH2D3C-206ENST00000429553 MYT1Q01538 1121 aa24.41■■□□□ 1.5
SH2D3C-206ENST00000429553 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
SH2D3C-206ENST00000429553 TRIM26Q12899 539 aaPredicted RBP24.14■■□□□ 1.45
SH2D3C-206ENST00000429553 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
SH2D3C-206ENST00000429553 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
SH2D3C-206ENST00000429553 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
SH2D3C-206ENST00000429553 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
SH2D3C-206ENST00000429553 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
SH2D3C-206ENST00000429553 GTF3C3Q9Y5Q9 886 aa23.81■■□□□ 1.4
SH2D3C-206ENST00000429553 ABCC9O60706 1549 aa23.75■■□□□ 1.39
SH2D3C-206ENST00000429553 CENPBP07199 599 aaPredicted RBP23.49■■□□□ 1.35
SH2D3C-206ENST00000429553 NACADO15069 1562 aa23.45■■□□□ 1.34
SH2D3C-206ENST00000429553 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
SH2D3C-206ENST00000429553 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
SH2D3C-206ENST00000429553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.21■■□□□ 1.31
SH2D3C-206ENST00000429553 RB1CC1Q8TDY2 1594 aa23.21■■□□□ 1.31
SH2D3C-206ENST00000429553 CCER1Q8TC90 406 aaPredicted RBP23.11■■□□□ 1.29
SH2D3C-206ENST00000429553 YTHDC1Q96MU7 727 aaKnown RBP23.09■■□□□ 1.29
SH2D3C-206ENST00000429553 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
SH2D3C-206ENST00000429553 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
SH2D3C-206ENST00000429553 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
SH2D3C-206ENST00000429553 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
SH2D3C-206ENST00000429553 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
SH2D3C-206ENST00000429553 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
SH2D3C-206ENST00000429553 ANP32EQ9BTT0 268 aa22.76■■□□□ 1.23
SH2D3C-206ENST00000429553 MIER1Q8N108 512 aa22.73■■□□□ 1.23
SH2D3C-206ENST00000429553 ZNF316A6NFI3 1004 aaPredicted RBP22.72■■□□□ 1.23
SH2D3C-206ENST00000429553 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
SH2D3C-206ENST00000429553 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
SH2D3C-206ENST00000429553 CSRNP3Q8WYN3 585 aa22.61■■□□□ 1.21
SH2D3C-206ENST00000429553 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
SH2D3C-206ENST00000429553 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
SH2D3C-206ENST00000429553 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
SH2D3C-206ENST00000429553 SUPT16HQ9Y5B9 1047 aaKnown RBP22.53■■□□□ 1.2
SH2D3C-206ENST00000429553 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
SH2D3C-206ENST00000429553 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
SH2D3C-206ENST00000429553 WIZO95785 1651 aa22.42■■□□□ 1.18
SH2D3C-206ENST00000429553 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.18
SH2D3C-206ENST00000429553 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
SH2D3C-206ENST00000429553 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
SH2D3C-206ENST00000429553 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
SH2D3C-206ENST00000429553 BCANQ96GW7 911 aa22.1■■□□□ 1.13
SH2D3C-206ENST00000429553 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
SH2D3C-206ENST00000429553 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
SH2D3C-206ENST00000429553 WRNQ14191 1432 aaPredicted RBP eCLIP21.99■■□□□ 1.11
SH2D3C-206ENST00000429553 RBM19Q9Y4C8 960 aaKnown RBP21.98■■□□□ 1.11
SH2D3C-206ENST00000429553 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
SH2D3C-206ENST00000429553 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
SH2D3C-206ENST00000429553 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
SH2D3C-206ENST00000429553 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
SH2D3C-206ENST00000429553 MSH5O43196 834 aa21.88■■□□□ 1.09
SH2D3C-206ENST00000429553 FKBP8Q14318 412 aa21.87■■□□□ 1.09
SH2D3C-206ENST00000429553 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
SH2D3C-206ENST00000429553 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
SH2D3C-206ENST00000429553 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
SH2D3C-206ENST00000429553 ITGAEP38570 1179 aa21.76■■□□□ 1.07
SH2D3C-206ENST00000429553 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
SH2D3C-206ENST00000429553 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
SH2D3C-206ENST00000429553 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
SH2D3C-206ENST00000429553 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
SH2D3C-206ENST00000429553 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
SH2D3C-206ENST00000429553 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
SH2D3C-206ENST00000429553 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
SH2D3C-206ENST00000429553 NEFLP07196 543 aa21.57■■□□□ 1.04
SH2D3C-206ENST00000429553 DEKP35659 375 aaKnown RBP21.56■■□□□ 1.04
SH2D3C-206ENST00000429553 SOGA1O94964 1423 aa21.51■■□□□ 1.03
SH2D3C-206ENST00000429553 FANCIQ9NVI1 1328 aa21.5■■□□□ 1.03
SH2D3C-206ENST00000429553 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
SH2D3C-206ENST00000429553 APLP2Q06481 763 aa21.48■■□□□ 1.03
SH2D3C-206ENST00000429553 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
SH2D3C-206ENST00000429553 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
SH2D3C-206ENST00000429553 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
SH2D3C-206ENST00000429553 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
SH2D3C-206ENST00000429553 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
SH2D3C-206ENST00000429553 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
SH2D3C-206ENST00000429553 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
SH2D3C-206ENST00000429553 CCDC136Q96JN2 1154 aa21.32■■□□□ 1
SH2D3C-206ENST00000429553 SYNJ1O43426 1573 aa21.32■■□□□ 1
SH2D3C-206ENST00000429553 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
SH2D3C-206ENST00000429553 NBR1Q14596 966 aa21.28■■□□□ 1
SH2D3C-206ENST00000429553 CFTRP13569 1480 aa21.27■■□□□ 1
SH2D3C-206ENST00000429553 GOLGA3Q08378 1498 aa21.27■■□□□ 1
SH2D3C-206ENST00000429553 CLIP1P30622 1438 aa21.23■□□□□ 0.99
SH2D3C-206ENST00000429553 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
SH2D3C-206ENST00000429553 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
SH2D3C-206ENST00000429553 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
SH2D3C-206ENST00000429553 EEA1Q15075 1411 aa21.17■□□□□ 0.98
SH2D3C-206ENST00000429553 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1094.5 ms