RNA–Protein interactions for RNA: ENST00000306384.4

VAMP5-201, Transcript of vesicle associated membrane protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP5, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5-201ENST00000306384 NISCHQ9Y2I1 1504 aa44.04■■■■■ 4.64
VAMP5-201ENST00000306384 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
VAMP5-201ENST00000306384 ABCC9O60706 1549 aa39.19■■■■□ 3.86
VAMP5-201ENST00000306384 RB1CC1Q8TDY2 1594 aa37.45■■■■□ 3.59
VAMP5-201ENST00000306384 NACADO15069 1562 aa37.25■■■■□ 3.55
VAMP5-201ENST00000306384 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
VAMP5-201ENST00000306384 MYO15BQ96JP2 1530 aa36.83■■■■□ 3.49
VAMP5-201ENST00000306384 UNC13AQ9UPW8 1703 aa36.77■■■■□ 3.48
VAMP5-201ENST00000306384 ZCCHC6Q5VYS8 1495 aaKnown RBP36.57■■■■□ 3.45
VAMP5-201ENST00000306384 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.44
VAMP5-201ENST00000306384 PABPN1Q86U42 306 aaKnown RBP eCLIP36.44■■■■□ 3.42
VAMP5-201ENST00000306384 BICRAQ9NZM4 1560 aa36.43■■■■□ 3.42
VAMP5-201ENST00000306384 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
VAMP5-201ENST00000306384 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
VAMP5-201ENST00000306384 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
VAMP5-201ENST00000306384 CC2D2AQ9P2K1 1620 aa35.49■■■■□ 3.27
VAMP5-201ENST00000306384 EIF4G1Q04637 1599 aaKnown RBP35.47■■■■□ 3.27
VAMP5-201ENST00000306384 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
VAMP5-201ENST00000306384 SMARCA4P51532 1647 aa34.36■■■■□ 3.09
VAMP5-201ENST00000306384 NCAPD3P42695 1498 aa34.35■■■■□ 3.09
VAMP5-201ENST00000306384 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
VAMP5-201ENST00000306384 SMARCA2P51531 1590 aa34.2■■■■□ 3.07
VAMP5-201ENST00000306384 DNAJC5Q9H3Z4 198 aa34.2■■■■□ 3.07
VAMP5-201ENST00000306384 HMGXB3Q12766 1538 aa34.17■■■■□ 3.06
VAMP5-201ENST00000306384 BAZ1AQ9NRL2 1556 aaPredicted RBP34.17■■■■□ 3.06
VAMP5-201ENST00000306384 PEG3Q9GZU2 1588 aa34.05■■■■□ 3.04
VAMP5-201ENST00000306384 MROH2BQ7Z745 1585 aa33.95■■■■□ 3.03
VAMP5-201ENST00000306384 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
VAMP5-201ENST00000306384 ERCC6Q03468 1493 aa33.79■■■■□ 3
VAMP5-201ENST00000306384 NESP48681 1621 aa33.76■■■■□ 3
VAMP5-201ENST00000306384 CUX2O14529 1486 aa33.72■■■□□ 2.99
VAMP5-201ENST00000306384 WIZO95785 1651 aa33.59■■■□□ 2.97
VAMP5-201ENST00000306384 LAMC3Q9Y6N6 1575 aa33.59■■■□□ 2.97
VAMP5-201ENST00000306384 THOC2Q8NI27 1593 aaKnown RBP33.47■■■□□ 2.95
VAMP5-201ENST00000306384 KIF21AQ7Z4S6 1674 aa33.44■■■□□ 2.94
VAMP5-201ENST00000306384 PDS5BQ9NTI5 1447 aa33.29■■■□□ 2.92
VAMP5-201ENST00000306384 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
VAMP5-201ENST00000306384 CADPSQ9ULU8 1353 aa33.27■■■□□ 2.92
VAMP5-201ENST00000306384 TOP2AP11388 1531 aaKnown RBP33.16■■■□□ 2.9
VAMP5-201ENST00000306384 MRC2Q9UBG0 1479 aa33.05■■■□□ 2.88
VAMP5-201ENST00000306384 WDR62O43379 1518 aa33.01■■■□□ 2.87
VAMP5-201ENST00000306384 CFTRP13569 1480 aa32.99■■■□□ 2.87
VAMP5-201ENST00000306384 CEP164Q9UPV0 1460 aa32.95■■■□□ 2.87
VAMP5-201ENST00000306384 FANCD2Q9BXW9 1451 aa32.93■■■□□ 2.86
VAMP5-201ENST00000306384 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
VAMP5-201ENST00000306384 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
VAMP5-201ENST00000306384 URB2Q14146 1524 aaKnown RBP32.69■■■□□ 2.82
VAMP5-201ENST00000306384 TOPBP1Q92547 1522 aa32.36■■■□□ 2.77
VAMP5-201ENST00000306384 IFT140Q96RY7 1462 aa32.28■■■□□ 2.76
VAMP5-201ENST00000306384 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
VAMP5-201ENST00000306384 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
VAMP5-201ENST00000306384 ZNF608Q9ULD9 1512 aaPredicted RBP32.23■■■□□ 2.75
VAMP5-201ENST00000306384 EIF4G3O43432 1585 aaKnown RBP32.13■■■□□ 2.73
VAMP5-201ENST00000306384 TARBP1Q13395 1621 aaKnown RBP32.12■■■□□ 2.73
VAMP5-201ENST00000306384 OSCARQ8IYS5 282 aa32.09■■■□□ 2.73
VAMP5-201ENST00000306384 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
VAMP5-201ENST00000306384 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
VAMP5-201ENST00000306384 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
VAMP5-201ENST00000306384 RAD54L2Q9Y4B4 1467 aa31.89■■■□□ 2.7
VAMP5-201ENST00000306384 CUX1P39880 1505 aa31.89■■■□□ 2.7
VAMP5-201ENST00000306384 CHD1O14646 1710 aa31.89■■■□□ 2.69
VAMP5-201ENST00000306384 FGD5Q6ZNL6 1462 aa31.85■■■□□ 2.69
VAMP5-201ENST00000306384 RIMBP3CA6NJZ7 1639 aa31.84■■■□□ 2.69
VAMP5-201ENST00000306384 RIMBP3BA6NNM3 1639 aa31.84■■■□□ 2.69
VAMP5-201ENST00000306384 RIMBP3Q9UFD9 1639 aa31.84■■■□□ 2.69
VAMP5-201ENST00000306384 SOGA1O94964 1423 aa31.83■■■□□ 2.69
VAMP5-201ENST00000306384 WDR97A6NE52 1622 aa31.8■■■□□ 2.68
VAMP5-201ENST00000306384 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
VAMP5-201ENST00000306384 TDRD9Q8NDG6 1382 aaKnown RBP31.72■■■□□ 2.67
VAMP5-201ENST00000306384 ARHGEF11O15085 1522 aa31.71■■■□□ 2.67
VAMP5-201ENST00000306384 SNAPC4Q5SXM2 1469 aa31.64■■■□□ 2.66
VAMP5-201ENST00000306384 PBRM1Q86U86 1689 aa31.59■■■□□ 2.65
VAMP5-201ENST00000306384 GRIN2BQ13224 1484 aa31.56■■■□□ 2.64
VAMP5-201ENST00000306384 MAGI1Q96QZ7 1491 aaPredicted RBP31.56■■■□□ 2.64
VAMP5-201ENST00000306384 FBLN2P98095 1184 aa31.54■■■□□ 2.64
VAMP5-201ENST00000306384 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
VAMP5-201ENST00000306384 ABCA10Q8WWZ4 1543 aa31.51■■■□□ 2.63
VAMP5-201ENST00000306384 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
VAMP5-201ENST00000306384 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
VAMP5-201ENST00000306384 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
VAMP5-201ENST00000306384 TOP2BQ02880 1626 aa31.46■■■□□ 2.63
VAMP5-201ENST00000306384 SYNJ2O15056 1496 aa31.45■■■□□ 2.62
VAMP5-201ENST00000306384 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
VAMP5-201ENST00000306384 ARAP1Q96P48 1450 aa31.43■■■□□ 2.62
VAMP5-201ENST00000306384 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
VAMP5-201ENST00000306384 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
VAMP5-201ENST00000306384 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
VAMP5-201ENST00000306384 ADAMTS12P58397 1594 aa31.25■■■□□ 2.59
VAMP5-201ENST00000306384 GRIN2AQ12879 1464 aa31.18■■■□□ 2.58
VAMP5-201ENST00000306384 ERICH3Q5RHP9 1530 aa31.14■■■□□ 2.57
VAMP5-201ENST00000306384 CEP170Q5SW79 1584 aa31.11■■■□□ 2.57
VAMP5-201ENST00000306384 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
VAMP5-201ENST00000306384 NUP160Q12769 1436 aa31.07■■■□□ 2.57
VAMP5-201ENST00000306384 ERCC6L2Q5T890 1561 aa31■■■□□ 2.55
VAMP5-201ENST00000306384 SHROOM2Q13796 1616 aa31■■■□□ 2.55
VAMP5-201ENST00000306384 TRHP20396 242 aaPredicted RBP30.87■■■□□ 2.53
VAMP5-201ENST00000306384 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
VAMP5-201ENST00000306384 CUL7Q14999 1698 aa30.76■■■□□ 2.51
VAMP5-201ENST00000306384 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
VAMP5-201ENST00000306384 IGF1RP08069 1367 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms