RNA–Protein interactions for RNA: ENST00000296812.6

FBXO4-202, Transcript of F-box protein 4, humanhuman

TSL 1 (best) BASIC

Gene FBXO4, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-202ENST00000296812 NISCHQ9Y2I1 1504 aa39.15■■■■□ 3.86
FBXO4-202ENST00000296812 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
FBXO4-202ENST00000296812 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
FBXO4-202ENST00000296812 ABCC9O60706 1549 aa32.8■■■□□ 2.84
FBXO4-202ENST00000296812 DCAF1Q9Y4B6 1507 aa32.38■■■□□ 2.77
FBXO4-202ENST00000296812 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
FBXO4-202ENST00000296812 MYO15BQ96JP2 1530 aa32.13■■■□□ 2.73
FBXO4-202ENST00000296812 NACADO15069 1562 aa32.07■■■□□ 2.72
FBXO4-202ENST00000296812 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.7
FBXO4-202ENST00000296812 SHROOM4Q9ULL8 1493 aa31.6■■■□□ 2.65
FBXO4-202ENST00000296812 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
FBXO4-202ENST00000296812 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
FBXO4-202ENST00000296812 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
FBXO4-202ENST00000296812 PABPN1Q86U42 306 aaKnown RBP eCLIP30.79■■■□□ 2.52
FBXO4-202ENST00000296812 CECR2Q9BXF3 1484 aa30.47■■■□□ 2.47
FBXO4-202ENST00000296812 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
FBXO4-202ENST00000296812 BAZ1AQ9NRL2 1556 aaPredicted RBP30.26■■■□□ 2.43
FBXO4-202ENST00000296812 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
FBXO4-202ENST00000296812 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
FBXO4-202ENST00000296812 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
FBXO4-202ENST00000296812 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
FBXO4-202ENST00000296812 WIZO95785 1651 aa30.05■■■□□ 2.4
FBXO4-202ENST00000296812 PEG3Q9GZU2 1588 aa29.88■■■□□ 2.37
FBXO4-202ENST00000296812 ATAD2BQ9ULI0 1458 aa29.77■■■□□ 2.36
FBXO4-202ENST00000296812 SMARCA2P51531 1590 aa29.75■■■□□ 2.35
FBXO4-202ENST00000296812 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
FBXO4-202ENST00000296812 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
FBXO4-202ENST00000296812 NCAPD3P42695 1498 aa29.56■■■□□ 2.32
FBXO4-202ENST00000296812 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
FBXO4-202ENST00000296812 HMGXB3Q12766 1538 aa29.54■■■□□ 2.32
FBXO4-202ENST00000296812 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
FBXO4-202ENST00000296812 DNAJC5BQ9UF47 199 aa29.28■■■□□ 2.28
FBXO4-202ENST00000296812 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
FBXO4-202ENST00000296812 CFTRP13569 1480 aa28.8■■■□□ 2.2
FBXO4-202ENST00000296812 CADPSQ9ULU8 1353 aa28.74■■■□□ 2.19
FBXO4-202ENST00000296812 NESP48681 1621 aa28.71■■■□□ 2.19
FBXO4-202ENST00000296812 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
FBXO4-202ENST00000296812 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
FBXO4-202ENST00000296812 ABCC8Q09428 1581 aa28.64■■■□□ 2.17
FBXO4-202ENST00000296812 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
FBXO4-202ENST00000296812 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
FBXO4-202ENST00000296812 WRNQ14191 1432 aaPredicted RBP eCLIP28.41■■■□□ 2.14
FBXO4-202ENST00000296812 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
FBXO4-202ENST00000296812 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
FBXO4-202ENST00000296812 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
FBXO4-202ENST00000296812 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
FBXO4-202ENST00000296812 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
FBXO4-202ENST00000296812 CUX1P39880 1505 aa28.32■■■□□ 2.12
FBXO4-202ENST00000296812 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
FBXO4-202ENST00000296812 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
FBXO4-202ENST00000296812 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
FBXO4-202ENST00000296812 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
FBXO4-202ENST00000296812 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
FBXO4-202ENST00000296812 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
FBXO4-202ENST00000296812 THOC2Q8NI27 1593 aaKnown RBP28.06■■■□□ 2.08
FBXO4-202ENST00000296812 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
FBXO4-202ENST00000296812 WDR62O43379 1518 aa27.99■■■□□ 2.07
FBXO4-202ENST00000296812 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
FBXO4-202ENST00000296812 SOGA1O94964 1423 aa27.95■■■□□ 2.06
FBXO4-202ENST00000296812 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
FBXO4-202ENST00000296812 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
FBXO4-202ENST00000296812 WDR97A6NE52 1622 aa27.87■■■□□ 2.05
FBXO4-202ENST00000296812 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
FBXO4-202ENST00000296812 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
FBXO4-202ENST00000296812 CUX2O14529 1486 aa27.81■■■□□ 2.04
FBXO4-202ENST00000296812 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
FBXO4-202ENST00000296812 EEA1Q15075 1411 aa27.76■■■□□ 2.03
FBXO4-202ENST00000296812 KIF27Q86VH2 1401 aa27.7■■■□□ 2.02
FBXO4-202ENST00000296812 ABCA5Q8WWZ7 1642 aa27.67■■■□□ 2.02
FBXO4-202ENST00000296812 IFT140Q96RY7 1462 aa27.66■■■□□ 2.02
FBXO4-202ENST00000296812 CSRNP3Q8WYN3 585 aa27.62■■■□□ 2.01
FBXO4-202ENST00000296812 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
FBXO4-202ENST00000296812 LOC105371045A0A1W2PR82 267 aa27.58■■■□□ 2.01
FBXO4-202ENST00000296812 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
FBXO4-202ENST00000296812 PBRM1Q86U86 1689 aa27.56■■■□□ 2
FBXO4-202ENST00000296812 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
FBXO4-202ENST00000296812 KIF21BO75037 1637 aa27.53■■■□□ 2
FBXO4-202ENST00000296812 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
FBXO4-202ENST00000296812 IGF1RP08069 1367 aa27.51■■□□□ 1.99
FBXO4-202ENST00000296812 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
FBXO4-202ENST00000296812 EHMT2Q96KQ7 1210 aa27.48■■□□□ 1.99
FBXO4-202ENST00000296812 PRXQ9BXM0 1461 aa27.46■■□□□ 1.99
FBXO4-202ENST00000296812 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
FBXO4-202ENST00000296812 CUL7Q14999 1698 aa27.43■■□□□ 1.98
FBXO4-202ENST00000296812 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
FBXO4-202ENST00000296812 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
FBXO4-202ENST00000296812 GRIN2BQ13224 1484 aa27.37■■□□□ 1.97
FBXO4-202ENST00000296812 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
FBXO4-202ENST00000296812 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
FBXO4-202ENST00000296812 SNAPC4Q5SXM2 1469 aa27.26■■□□□ 1.95
FBXO4-202ENST00000296812 UBTFP17480 764 aaKnown RBP27.21■■□□□ 1.95
FBXO4-202ENST00000296812 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
FBXO4-202ENST00000296812 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
FBXO4-202ENST00000296812 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.94
FBXO4-202ENST00000296812 CTTNBP2Q8WZ74 1663 aa27.15■■□□□ 1.94
FBXO4-202ENST00000296812 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
FBXO4-202ENST00000296812 CHD1O14646 1710 aa27.08■■□□□ 1.92
FBXO4-202ENST00000296812 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
FBXO4-202ENST00000296812 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
FBXO4-202ENST00000296812 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms