RNA–Protein interactions for RNA: ENST00000508638.5

PKD2L2-205, Transcript of polycystin 2 like 2, transient receptor potential cation channel, humanhuman

TSL 1 (best) BASIC

Gene PKD2L2, Length 2,333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L2-205ENST00000508638 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
PKD2L2-205ENST00000508638 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
PKD2L2-205ENST00000508638 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
PKD2L2-205ENST00000508638 CCDC180Q9P1Z9 1646 aa27.14■■□□□ 1.93
PKD2L2-205ENST00000508638 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
PKD2L2-205ENST00000508638 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
PKD2L2-205ENST00000508638 MYO15BQ96JP2 1530 aa26.51■■□□□ 1.83
PKD2L2-205ENST00000508638 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.81
PKD2L2-205ENST00000508638 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
PKD2L2-205ENST00000508638 HRCP23327 699 aa25.82■■□□□ 1.72
PKD2L2-205ENST00000508638 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
PKD2L2-205ENST00000508638 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.71
PKD2L2-205ENST00000508638 ABCC9O60706 1549 aa25.7■■□□□ 1.71
PKD2L2-205ENST00000508638 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
PKD2L2-205ENST00000508638 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
PKD2L2-205ENST00000508638 PPARGC1BQ86YN6 1023 aaKnown RBP25.45■■□□□ 1.66
PKD2L2-205ENST00000508638 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
PKD2L2-205ENST00000508638 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
PKD2L2-205ENST00000508638 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
PKD2L2-205ENST00000508638 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
PKD2L2-205ENST00000508638 FAM9AQ8IZU1 332 aaPredicted RBP25.06■■□□□ 1.6
PKD2L2-205ENST00000508638 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
PKD2L2-205ENST00000508638 NACADO15069 1562 aa25.02■■□□□ 1.6
PKD2L2-205ENST00000508638 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
PKD2L2-205ENST00000508638 WIZO95785 1651 aa24.93■■□□□ 1.58
PKD2L2-205ENST00000508638 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
PKD2L2-205ENST00000508638 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
PKD2L2-205ENST00000508638 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
PKD2L2-205ENST00000508638 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
PKD2L2-205ENST00000508638 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
PKD2L2-205ENST00000508638 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
PKD2L2-205ENST00000508638 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
PKD2L2-205ENST00000508638 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
PKD2L2-205ENST00000508638 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
PKD2L2-205ENST00000508638 SOGA1O94964 1423 aa24.22■■□□□ 1.47
PKD2L2-205ENST00000508638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.22■■□□□ 1.47
PKD2L2-205ENST00000508638 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
PKD2L2-205ENST00000508638 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
PKD2L2-205ENST00000508638 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
PKD2L2-205ENST00000508638 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
PKD2L2-205ENST00000508638 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
PKD2L2-205ENST00000508638 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
PKD2L2-205ENST00000508638 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
PKD2L2-205ENST00000508638 TNIKQ9UKE5 1360 aa24■■□□□ 1.43
PKD2L2-205ENST00000508638 SCAF1Q9H7N4 1312 aaKnown RBP23.99■■□□□ 1.43
PKD2L2-205ENST00000508638 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
PKD2L2-205ENST00000508638 UBTFP17480 764 aaKnown RBP23.9■■□□□ 1.42
PKD2L2-205ENST00000508638 EEA1Q15075 1411 aa23.9■■□□□ 1.42
PKD2L2-205ENST00000508638 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
PKD2L2-205ENST00000508638 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
PKD2L2-205ENST00000508638 GOLGA3Q08378 1498 aa23.84■■□□□ 1.41
PKD2L2-205ENST00000508638 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
PKD2L2-205ENST00000508638 KIF21BO75037 1637 aa23.7■■□□□ 1.38
PKD2L2-205ENST00000508638 DIEXFQ68CQ4 756 aaKnown RBP23.68■■□□□ 1.38
PKD2L2-205ENST00000508638 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
PKD2L2-205ENST00000508638 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
PKD2L2-205ENST00000508638 NEUROD1Q13562 356 aa23.65■■□□□ 1.38
PKD2L2-205ENST00000508638 CLIP1P30622 1438 aa23.61■■□□□ 1.37
PKD2L2-205ENST00000508638 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
PKD2L2-205ENST00000508638 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
PKD2L2-205ENST00000508638 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
PKD2L2-205ENST00000508638 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
PKD2L2-205ENST00000508638 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
PKD2L2-205ENST00000508638 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
PKD2L2-205ENST00000508638 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
PKD2L2-205ENST00000508638 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
PKD2L2-205ENST00000508638 GTF3C3Q9Y5Q9 886 aa23.37■■□□□ 1.33
PKD2L2-205ENST00000508638 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
PKD2L2-205ENST00000508638 CENPBP07199 599 aaPredicted RBP23.31■■□□□ 1.32
PKD2L2-205ENST00000508638 APLP2Q06481 763 aa23.29■■□□□ 1.32
PKD2L2-205ENST00000508638 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
PKD2L2-205ENST00000508638 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
PKD2L2-205ENST00000508638 CUX1P39880 1505 aa23.28■■□□□ 1.32
PKD2L2-205ENST00000508638 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
PKD2L2-205ENST00000508638 MIER1Q8N108 512 aa23.24■■□□□ 1.31
PKD2L2-205ENST00000508638 YTHDC1Q96MU7 727 aaKnown RBP23.23■■□□□ 1.31
PKD2L2-205ENST00000508638 KANK4Q5T7N3 995 aaPredicted RBP23.2■■□□□ 1.3
PKD2L2-205ENST00000508638 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
PKD2L2-205ENST00000508638 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
PKD2L2-205ENST00000508638 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
PKD2L2-205ENST00000508638 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
PKD2L2-205ENST00000508638 CFTRP13569 1480 aa23.07■■□□□ 1.28
PKD2L2-205ENST00000508638 ARHGAP35Q9NRY4 1499 aa23.04■■□□□ 1.28
PKD2L2-205ENST00000508638 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
PKD2L2-205ENST00000508638 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
PKD2L2-205ENST00000508638 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
PKD2L2-205ENST00000508638 CUX2O14529 1486 aa22.9■■□□□ 1.26
PKD2L2-205ENST00000508638 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
PKD2L2-205ENST00000508638 ITGAEP38570 1179 aa22.88■■□□□ 1.25
PKD2L2-205ENST00000508638 IGF1RP08069 1367 aa22.88■■□□□ 1.25
PKD2L2-205ENST00000508638 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
PKD2L2-205ENST00000508638 TIAM1Q13009 1591 aa22.8■■□□□ 1.24
PKD2L2-205ENST00000508638 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
PKD2L2-205ENST00000508638 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
PKD2L2-205ENST00000508638 MAPKBP1O60336 1514 aa22.75■■□□□ 1.23
PKD2L2-205ENST00000508638 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
PKD2L2-205ENST00000508638 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.22
PKD2L2-205ENST00000508638 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
PKD2L2-205ENST00000508638 P3H3Q8IVL6 736 aa22.67■■□□□ 1.22
PKD2L2-205ENST00000508638 PCF11O94913 1555 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms