RNA–Protein interactions for RNA: ENST00000558566.1

TINF2-208, Transcript of TERF1 interacting nuclear factor 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TINF2, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINF2-208ENST00000558566 NISCHQ9Y2I1 1504 aa37.99■■■■□ 3.67
TINF2-208ENST00000558566 CCDC180Q9P1Z9 1646 aa33.08■■■□□ 2.89
TINF2-208ENST00000558566 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
TINF2-208ENST00000558566 DCAF8L2P0C7V8 631 aa31.51■■■□□ 2.63
TINF2-208ENST00000558566 ABCC9O60706 1549 aa31.38■■■□□ 2.61
TINF2-208ENST00000558566 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
TINF2-208ENST00000558566 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
TINF2-208ENST00000558566 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
TINF2-208ENST00000558566 NACADO15069 1562 aa30.77■■■□□ 2.52
TINF2-208ENST00000558566 SCRIBQ14160 1630 aa30.57■■■□□ 2.48
TINF2-208ENST00000558566 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
TINF2-208ENST00000558566 UNC13AQ9UPW8 1703 aa30.09■■■□□ 2.41
TINF2-208ENST00000558566 SUPT5HO00267 1087 aaKnown RBP30■■■□□ 2.39
TINF2-208ENST00000558566 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
TINF2-208ENST00000558566 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
TINF2-208ENST00000558566 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
TINF2-208ENST00000558566 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
TINF2-208ENST00000558566 MROH2BQ7Z745 1585 aa29.42■■■□□ 2.3
TINF2-208ENST00000558566 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
TINF2-208ENST00000558566 WIZO95785 1651 aa29.23■■■□□ 2.27
TINF2-208ENST00000558566 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
TINF2-208ENST00000558566 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
TINF2-208ENST00000558566 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
TINF2-208ENST00000558566 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
TINF2-208ENST00000558566 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.19
TINF2-208ENST00000558566 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
TINF2-208ENST00000558566 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
TINF2-208ENST00000558566 CCDC88BA6NC98 1476 aa28.56■■■□□ 2.16
TINF2-208ENST00000558566 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
TINF2-208ENST00000558566 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
TINF2-208ENST00000558566 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
TINF2-208ENST00000558566 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
TINF2-208ENST00000558566 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
TINF2-208ENST00000558566 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
TINF2-208ENST00000558566 CFTRP13569 1480 aa27.8■■■□□ 2.04
TINF2-208ENST00000558566 WRNQ14191 1432 aaPredicted RBP eCLIP27.76■■■□□ 2.03
TINF2-208ENST00000558566 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
TINF2-208ENST00000558566 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
TINF2-208ENST00000558566 FAM9AQ8IZU1 332 aaPredicted RBP27.74■■■□□ 2.03
TINF2-208ENST00000558566 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
TINF2-208ENST00000558566 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
TINF2-208ENST00000558566 LOC105371045A0A1W2PR82 267 aa27.67■■■□□ 2.02
TINF2-208ENST00000558566 NESP48681 1621 aa27.58■■■□□ 2.01
TINF2-208ENST00000558566 TOP2BQ02880 1626 aa27.54■■■□□ 2
TINF2-208ENST00000558566 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
TINF2-208ENST00000558566 SOGA1O94964 1423 aa27.49■■□□□ 1.99
TINF2-208ENST00000558566 CUX1P39880 1505 aa27.49■■□□□ 1.99
TINF2-208ENST00000558566 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
TINF2-208ENST00000558566 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
TINF2-208ENST00000558566 EHMT2Q96KQ7 1210 aa27.44■■□□□ 1.98
TINF2-208ENST00000558566 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
TINF2-208ENST00000558566 EEA1Q15075 1411 aa27.29■■□□□ 1.96
TINF2-208ENST00000558566 KIF21AQ7Z4S6 1674 aa27.26■■□□□ 1.95
TINF2-208ENST00000558566 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
TINF2-208ENST00000558566 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
TINF2-208ENST00000558566 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
TINF2-208ENST00000558566 DNMBPQ6XZF7 1577 aa27.19■■□□□ 1.94
TINF2-208ENST00000558566 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
TINF2-208ENST00000558566 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
TINF2-208ENST00000558566 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
TINF2-208ENST00000558566 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
TINF2-208ENST00000558566 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
TINF2-208ENST00000558566 KIF21BO75037 1637 aa27.02■■□□□ 1.92
TINF2-208ENST00000558566 CUX2O14529 1486 aa27.01■■□□□ 1.91
TINF2-208ENST00000558566 GOLGA3Q08378 1498 aa27■■□□□ 1.91
TINF2-208ENST00000558566 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
TINF2-208ENST00000558566 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.9
TINF2-208ENST00000558566 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
TINF2-208ENST00000558566 MRC2Q9UBG0 1479 aa26.91■■□□□ 1.9
TINF2-208ENST00000558566 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
TINF2-208ENST00000558566 ABCA10Q8WWZ4 1543 aa26.88■■□□□ 1.89
TINF2-208ENST00000558566 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
TINF2-208ENST00000558566 PRXQ9BXM0 1461 aa26.86■■□□□ 1.89
TINF2-208ENST00000558566 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
TINF2-208ENST00000558566 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
TINF2-208ENST00000558566 IGF1RP08069 1367 aa26.81■■□□□ 1.88
TINF2-208ENST00000558566 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
TINF2-208ENST00000558566 WDR62O43379 1518 aa26.76■■□□□ 1.87
TINF2-208ENST00000558566 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
TINF2-208ENST00000558566 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
TINF2-208ENST00000558566 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
TINF2-208ENST00000558566 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.87
TINF2-208ENST00000558566 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
TINF2-208ENST00000558566 GAPVD1Q14C86 1478 aa26.63■■□□□ 1.85
TINF2-208ENST00000558566 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
TINF2-208ENST00000558566 CUL7Q14999 1698 aa26.59■■□□□ 1.85
TINF2-208ENST00000558566 CLIP1P30622 1438 aa26.59■■□□□ 1.85
TINF2-208ENST00000558566 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
TINF2-208ENST00000558566 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
TINF2-208ENST00000558566 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.842e-7■■■■■ 29
TINF2-208ENST00000558566 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
TINF2-208ENST00000558566 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.83
TINF2-208ENST00000558566 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
TINF2-208ENST00000558566 PCGF6Q9BYE7 350 aa26.41■■□□□ 1.82
TINF2-208ENST00000558566 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
TINF2-208ENST00000558566 CTTNBP2Q8WZ74 1663 aa26.38■■□□□ 1.81
TINF2-208ENST00000558566 ADAMTS12P58397 1594 aa26.36■■□□□ 1.81
TINF2-208ENST00000558566 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
TINF2-208ENST00000558566 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
TINF2-208ENST00000558566 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms