Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 HNRNPDP1-201ENST00000439535 754 ntBASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 FDX1P1-201ENST00000449115 551 ntBASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 AC105339.3-201ENST00000560043 636 ntBASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 AC148477.8-201ENST00000624298 468 ntBASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 FAM215A-202ENST00000632077 792 ntBASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LIN7CQ9NUP9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LIN7CQ9NUP9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms