RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
SMN1-203ENST00000503079 CCDC180Q9P1Z9 1646 aa39.6■■■■□ 3.93
SMN1-203ENST00000503079 ABCC9O60706 1549 aa39.31■■■■□ 3.88
SMN1-203ENST00000503079 RB1CC1Q8TDY2 1594 aa37.45■■■■□ 3.59
SMN1-203ENST00000503079 NACADO15069 1562 aa37.26■■■■□ 3.56
SMN1-203ENST00000503079 UNC13AQ9UPW8 1703 aa36.98■■■■□ 3.51
SMN1-203ENST00000503079 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
SMN1-203ENST00000503079 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
SMN1-203ENST00000503079 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
SMN1-203ENST00000503079 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
SMN1-203ENST00000503079 BICRAQ9NZM4 1560 aa36.62■■■■□ 3.45
SMN1-203ENST00000503079 PABPN1Q86U42 306 aaKnown RBP eCLIP36.58■■■■□ 3.45
SMN1-203ENST00000503079 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
SMN1-203ENST00000503079 SCRIBQ14160 1630 aa36.14■■■■□ 3.38
SMN1-203ENST00000503079 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
SMN1-203ENST00000503079 CC2D2AQ9P2K1 1620 aa35.59■■■■□ 3.29
SMN1-203ENST00000503079 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
SMN1-203ENST00000503079 CECR2Q9BXF3 1484 aa35.33■■■■□ 3.25
SMN1-203ENST00000503079 SMARCA4P51532 1647 aa34.49■■■■□ 3.11
SMN1-203ENST00000503079 NCAPD3P42695 1498 aa34.4■■■■□ 3.1
SMN1-203ENST00000503079 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
SMN1-203ENST00000503079 BAZ1AQ9NRL2 1556 aaPredicted RBP34.23■■■■□ 3.07
SMN1-203ENST00000503079 HMGXB3Q12766 1538 aa34.22■■■■□ 3.07
SMN1-203ENST00000503079 SMARCA2P51531 1590 aa34.22■■■■□ 3.07
SMN1-203ENST00000503079 MROH2BQ7Z745 1585 aa34.16■■■■□ 3.06
SMN1-203ENST00000503079 PEG3Q9GZU2 1588 aa34.15■■■■□ 3.06
SMN1-203ENST00000503079 BAZ1BQ9UIG0 1483 aaKnown RBP33.99■■■■□ 3.03
SMN1-203ENST00000503079 NESP48681 1621 aa33.95■■■■□ 3.03
SMN1-203ENST00000503079 WIZO95785 1651 aa33.8■■■■□ 3
SMN1-203ENST00000503079 ERCC6Q03468 1493 aa33.75■■■□□ 2.99
SMN1-203ENST00000503079 CUX2O14529 1486 aa33.67■■■□□ 2.98
SMN1-203ENST00000503079 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
SMN1-203ENST00000503079 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
SMN1-203ENST00000503079 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
SMN1-203ENST00000503079 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.94
SMN1-203ENST00000503079 DNAJC5Q9H3Z4 198 aa33.34■■■□□ 2.93
SMN1-203ENST00000503079 CADPSQ9ULU8 1353 aa33.32■■■□□ 2.92
SMN1-203ENST00000503079 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
SMN1-203ENST00000503079 PDS5BQ9NTI5 1447 aa33.24■■■□□ 2.91
SMN1-203ENST00000503079 WDR62O43379 1518 aa33.08■■■□□ 2.89
SMN1-203ENST00000503079 MRC2Q9UBG0 1479 aa33.08■■■□□ 2.89
SMN1-203ENST00000503079 CFTRP13569 1480 aa33.07■■■□□ 2.88
SMN1-203ENST00000503079 FANCD2Q9BXW9 1451 aa32.99■■■□□ 2.87
SMN1-203ENST00000503079 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
SMN1-203ENST00000503079 PRDM2Q13029 1718 aa32.94■■■□□ 2.86
SMN1-203ENST00000503079 CCDC88BA6NC98 1476 aa32.89■■■□□ 2.86
SMN1-203ENST00000503079 URB2Q14146 1524 aaKnown RBP32.84■■■□□ 2.85
SMN1-203ENST00000503079 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
SMN1-203ENST00000503079 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
SMN1-203ENST00000503079 DNMBPQ6XZF7 1577 aa32.36■■■□□ 2.77
SMN1-203ENST00000503079 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
SMN1-203ENST00000503079 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.75
SMN1-203ENST00000503079 EIF4G3O43432 1585 aaKnown RBP32.24■■■□□ 2.75
SMN1-203ENST00000503079 ABCC8Q09428 1581 aa32.18■■■□□ 2.74
SMN1-203ENST00000503079 POLA1P09884 1462 aaPredicted RBP32.16■■■□□ 2.74
SMN1-203ENST00000503079 CUX1P39880 1505 aa32.06■■■□□ 2.72
SMN1-203ENST00000503079 RAD54L2Q9Y4B4 1467 aa32.05■■■□□ 2.72
SMN1-203ENST00000503079 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.72
SMN1-203ENST00000503079 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
SMN1-203ENST00000503079 CHD1O14646 1710 aa32.01■■■□□ 2.72
SMN1-203ENST00000503079 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
SMN1-203ENST00000503079 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
SMN1-203ENST00000503079 TRIM41Q8WV44 630 aa31.93■■■□□ 2.7
SMN1-203ENST00000503079 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
SMN1-203ENST00000503079 RIMBP3CA6NJZ7 1639 aa31.91■■■□□ 2.7
SMN1-203ENST00000503079 RIMBP3BA6NNM3 1639 aa31.91■■■□□ 2.7
SMN1-203ENST00000503079 RIMBP3Q9UFD9 1639 aa31.91■■■□□ 2.7
SMN1-203ENST00000503079 SOGA1O94964 1423 aa31.87■■■□□ 2.69
SMN1-203ENST00000503079 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
SMN1-203ENST00000503079 ARHGEF11O15085 1522 aa31.77■■■□□ 2.68
SMN1-203ENST00000503079 SNAPC4Q5SXM2 1469 aa31.73■■■□□ 2.67
SMN1-203ENST00000503079 PBRM1Q86U86 1689 aa31.7■■■□□ 2.67
SMN1-203ENST00000503079 ABCA5Q8WWZ7 1642 aa31.66■■■□□ 2.66
SMN1-203ENST00000503079 SYNJ1O43426 1573 aa31.64■■■□□ 2.65
SMN1-203ENST00000503079 BIVM-ERCC5R4GMW8 1640 aa31.64■■■□□ 2.65
SMN1-203ENST00000503079 ABCA10Q8WWZ4 1543 aa31.6■■■□□ 2.65
SMN1-203ENST00000503079 CLASP1Q7Z460 1538 aa31.59■■■□□ 2.65
SMN1-203ENST00000503079 GRIN2BQ13224 1484 aa31.59■■■□□ 2.65
SMN1-203ENST00000503079 TOP2BQ02880 1626 aa31.57■■■□□ 2.64
SMN1-203ENST00000503079 MAGI1Q96QZ7 1491 aaPredicted RBP31.57■■■□□ 2.64
SMN1-203ENST00000503079 FBLN2P98095 1184 aa31.54■■■□□ 2.64
SMN1-203ENST00000503079 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
SMN1-203ENST00000503079 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
SMN1-203ENST00000503079 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
SMN1-203ENST00000503079 WRNQ14191 1432 aaPredicted RBP eCLIP31.46■■■□□ 2.63
SMN1-203ENST00000503079 ADAMTS12P58397 1594 aa31.37■■■□□ 2.61
SMN1-203ENST00000503079 CYB5RLQ6IPT4 315 aa31.33■■■□□ 2.61
SMN1-203ENST00000503079 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
SMN1-203ENST00000503079 CEP170Q5SW79 1584 aa31.26■■■□□ 2.6
SMN1-203ENST00000503079 GRIN2AQ12879 1464 aa31.25■■■□□ 2.59
SMN1-203ENST00000503079 ERCC6L2Q5T890 1561 aa31.22■■■□□ 2.59
SMN1-203ENST00000503079 ERICH3Q5RHP9 1530 aa31.17■■■□□ 2.58
SMN1-203ENST00000503079 NUP160Q12769 1436 aa31.15■■■□□ 2.58
SMN1-203ENST00000503079 SHROOM2Q13796 1616 aa31.1■■■□□ 2.57
SMN1-203ENST00000503079 FHAD1B1AJZ9 1412 aa31.1■■■□□ 2.57
SMN1-203ENST00000503079 RUSC2Q8N2Y8 1516 aa30.94■■■□□ 2.54
SMN1-203ENST00000503079 IGF1RP08069 1367 aa30.83■■■□□ 2.53
SMN1-203ENST00000503079 CUL7Q14999 1698 aa30.8■■■□□ 2.52
SMN1-203ENST00000503079 TRHP20396 242 aaPredicted RBP30.78■■■□□ 2.52
SMN1-203ENST00000503079 KIF27Q86VH2 1401 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms