RNA–Protein interactions for RNA: ENST00000378404.3

ACTRT2-201, Transcript of actin related protein T2, humanhuman

APPRIS P1 BASIC

Gene ACTRT2, Length 1,421 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT2-201ENST00000378404 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
ACTRT2-201ENST00000378404 CCDC180Q9P1Z9 1646 aa37.71■■■■□ 3.63
ACTRT2-201ENST00000378404 ABCC9O60706 1549 aa36.86■■■■□ 3.49
ACTRT2-201ENST00000378404 RB1CC1Q8TDY2 1594 aa35.46■■■■□ 3.27
ACTRT2-201ENST00000378404 NACADO15069 1562 aa35.43■■■■□ 3.26
ACTRT2-201ENST00000378404 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
ACTRT2-201ENST00000378404 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.24
ACTRT2-201ENST00000378404 MYO15BQ96JP2 1530 aa35.23■■■■□ 3.23
ACTRT2-201ENST00000378404 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
ACTRT2-201ENST00000378404 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
ACTRT2-201ENST00000378404 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
ACTRT2-201ENST00000378404 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.1
ACTRT2-201ENST00000378404 SCRIBQ14160 1630 aa34.35■■■■□ 3.09
ACTRT2-201ENST00000378404 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
ACTRT2-201ENST00000378404 DNAJC5BQ9UF47 199 aa33.95■■■■□ 3.02
ACTRT2-201ENST00000378404 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.96
ACTRT2-201ENST00000378404 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
ACTRT2-201ENST00000378404 CECR2Q9BXF3 1484 aa33.13■■■□□ 2.89
ACTRT2-201ENST00000378404 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
ACTRT2-201ENST00000378404 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
ACTRT2-201ENST00000378404 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
ACTRT2-201ENST00000378404 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
ACTRT2-201ENST00000378404 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
ACTRT2-201ENST00000378404 SMARCA2P51531 1590 aa32.64■■■□□ 2.82
ACTRT2-201ENST00000378404 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
ACTRT2-201ENST00000378404 HMGXB3Q12766 1538 aa32.53■■■□□ 2.8
ACTRT2-201ENST00000378404 BAZ1BQ9UIG0 1483 aaKnown RBP32.39■■■□□ 2.78
ACTRT2-201ENST00000378404 WIZO95785 1651 aa32.32■■■□□ 2.76
ACTRT2-201ENST00000378404 RSF1Q96T23 1441 aaPredicted RBP32.25■■■□□ 2.75
ACTRT2-201ENST00000378404 NESP48681 1621 aa31.93■■■□□ 2.7
ACTRT2-201ENST00000378404 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
ACTRT2-201ENST00000378404 LAMC3Q9Y6N6 1575 aa31.84■■■□□ 2.69
ACTRT2-201ENST00000378404 ERCC6Q03468 1493 aa31.73■■■□□ 2.67
ACTRT2-201ENST00000378404 CADPSQ9ULU8 1353 aa31.71■■■□□ 2.67
ACTRT2-201ENST00000378404 KIF21AQ7Z4S6 1674 aa31.59■■■□□ 2.65
ACTRT2-201ENST00000378404 PDS5BQ9NTI5 1447 aa31.57■■■□□ 2.65
ACTRT2-201ENST00000378404 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
ACTRT2-201ENST00000378404 CFTRP13569 1480 aa31.54■■■□□ 2.64
ACTRT2-201ENST00000378404 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
ACTRT2-201ENST00000378404 CUX2O14529 1486 aa31.46■■■□□ 2.63
ACTRT2-201ENST00000378404 PRDM2Q13029 1718 aa31.39■■■□□ 2.62
ACTRT2-201ENST00000378404 FANCD2Q9BXW9 1451 aa31.34■■■□□ 2.61
ACTRT2-201ENST00000378404 SUPT5HO00267 1087 aaKnown RBP31.32■■■□□ 2.6
ACTRT2-201ENST00000378404 CEP164Q9UPV0 1460 aa31.3■■■□□ 2.6
ACTRT2-201ENST00000378404 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
ACTRT2-201ENST00000378404 WDR62O43379 1518 aa31.2■■■□□ 2.59
ACTRT2-201ENST00000378404 URB2Q14146 1524 aaKnown RBP31.07■■■□□ 2.56
ACTRT2-201ENST00000378404 TOPBP1Q92547 1522 aa30.86■■■□□ 2.53
ACTRT2-201ENST00000378404 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
ACTRT2-201ENST00000378404 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
ACTRT2-201ENST00000378404 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
ACTRT2-201ENST00000378404 CUX1P39880 1505 aa30.63■■■□□ 2.49
ACTRT2-201ENST00000378404 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
ACTRT2-201ENST00000378404 TARBP1Q13395 1621 aaKnown RBP30.58■■■□□ 2.49
ACTRT2-201ENST00000378404 DNAJC5Q9H3Z4 198 aa30.57■■■□□ 2.48
ACTRT2-201ENST00000378404 ZNF608Q9ULD9 1512 aaPredicted RBP30.54■■■□□ 2.48
ACTRT2-201ENST00000378404 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
ACTRT2-201ENST00000378404 RAD54L2Q9Y4B4 1467 aa30.45■■■□□ 2.46
ACTRT2-201ENST00000378404 SOGA1O94964 1423 aa30.45■■■□□ 2.46
ACTRT2-201ENST00000378404 EIF4G3O43432 1585 aaKnown RBP30.43■■■□□ 2.46
ACTRT2-201ENST00000378404 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
ACTRT2-201ENST00000378404 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
ACTRT2-201ENST00000378404 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
ACTRT2-201ENST00000378404 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.45
ACTRT2-201ENST00000378404 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
ACTRT2-201ENST00000378404 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
ACTRT2-201ENST00000378404 TDRD9Q8NDG6 1382 aaKnown RBP30.27■■■□□ 2.44
ACTRT2-201ENST00000378404 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
ACTRT2-201ENST00000378404 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
ACTRT2-201ENST00000378404 ABCA5Q8WWZ7 1642 aa30.13■■■□□ 2.41
ACTRT2-201ENST00000378404 CHD1O14646 1710 aa30.1■■■□□ 2.41
ACTRT2-201ENST00000378404 PBRM1Q86U86 1689 aa30.1■■■□□ 2.41
ACTRT2-201ENST00000378404 GAPVD1Q14C86 1478 aa30.09■■■□□ 2.41
ACTRT2-201ENST00000378404 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
ACTRT2-201ENST00000378404 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
ACTRT2-201ENST00000378404 MAGI1Q96QZ7 1491 aaPredicted RBP30.02■■■□□ 2.4
ACTRT2-201ENST00000378404 FBLN2P98095 1184 aa29.92■■■□□ 2.38
ACTRT2-201ENST00000378404 SYNJ2O15056 1496 aa29.91■■■□□ 2.38
ACTRT2-201ENST00000378404 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
ACTRT2-201ENST00000378404 ERICH3Q5RHP9 1530 aa29.85■■■□□ 2.37
ACTRT2-201ENST00000378404 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
ACTRT2-201ENST00000378404 CLASP1Q7Z460 1538 aa29.74■■■□□ 2.35
ACTRT2-201ENST00000378404 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
ACTRT2-201ENST00000378404 KIF27Q86VH2 1401 aa29.72■■■□□ 2.35
ACTRT2-201ENST00000378404 RIMBP3CA6NJZ7 1639 aa29.72■■■□□ 2.35
ACTRT2-201ENST00000378404 RIMBP3BA6NNM3 1639 aa29.72■■■□□ 2.35
ACTRT2-201ENST00000378404 RIMBP3Q9UFD9 1639 aa29.72■■■□□ 2.35
ACTRT2-201ENST00000378404 GRIN2AQ12879 1464 aa29.71■■■□□ 2.35
ACTRT2-201ENST00000378404 ARHGEF11O15085 1522 aa29.68■■■□□ 2.34
ACTRT2-201ENST00000378404 IGF1RP08069 1367 aa29.65■■■□□ 2.34
ACTRT2-201ENST00000378404 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
ACTRT2-201ENST00000378404 NUP160Q12769 1436 aa29.6■■■□□ 2.33
ACTRT2-201ENST00000378404 TRIM41Q8WV44 630 aa29.58■■■□□ 2.33
ACTRT2-201ENST00000378404 CUL7Q14999 1698 aa29.58■■■□□ 2.33
ACTRT2-201ENST00000378404 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
ACTRT2-201ENST00000378404 CARMIL1Q5VZK9 1371 aa29.44■■■□□ 2.3
ACTRT2-201ENST00000378404 ARAP1Q96P48 1450 aa29.44■■■□□ 2.3
ACTRT2-201ENST00000378404 SHROOM2Q13796 1616 aa29.44■■■□□ 2.3
ACTRT2-201ENST00000378404 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
ACTRT2-201ENST00000378404 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms