RNA–Protein interactions for RNA: ENST00000374885.5

MSANTD3-201, Transcript of Myb/SANT DNA binding domain containing 3, humanhuman

TSL 2 BASIC

Gene MSANTD3, Length 786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-201ENST00000374885 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
MSANTD3-201ENST00000374885 CCDC180Q9P1Z9 1646 aa38.19■■■■□ 3.7
MSANTD3-201ENST00000374885 ABCC9O60706 1549 aa37.87■■■■□ 3.65
MSANTD3-201ENST00000374885 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
MSANTD3-201ENST00000374885 NACADO15069 1562 aa35.96■■■■□ 3.35
MSANTD3-201ENST00000374885 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
MSANTD3-201ENST00000374885 MYO15BQ96JP2 1530 aa35.62■■■■□ 3.29
MSANTD3-201ENST00000374885 DNAJC5BQ9UF47 199 aa35.61■■■■□ 3.29
MSANTD3-201ENST00000374885 ZCCHC6Q5VYS8 1495 aaKnown RBP35.42■■■■□ 3.26
MSANTD3-201ENST00000374885 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
MSANTD3-201ENST00000374885 UNC13AQ9UPW8 1703 aa35.27■■■■□ 3.24
MSANTD3-201ENST00000374885 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.23
MSANTD3-201ENST00000374885 BICRAQ9NZM4 1560 aa35.03■■■■□ 3.2
MSANTD3-201ENST00000374885 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
MSANTD3-201ENST00000374885 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
MSANTD3-201ENST00000374885 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
MSANTD3-201ENST00000374885 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
MSANTD3-201ENST00000374885 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
MSANTD3-201ENST00000374885 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
MSANTD3-201ENST00000374885 BAZ1AQ9NRL2 1556 aaPredicted RBP33.12■■■□□ 2.89
MSANTD3-201ENST00000374885 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
MSANTD3-201ENST00000374885 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
MSANTD3-201ENST00000374885 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
MSANTD3-201ENST00000374885 HMGXB3Q12766 1538 aa32.99■■■□□ 2.87
MSANTD3-201ENST00000374885 PEG3Q9GZU2 1588 aa32.88■■■□□ 2.85
MSANTD3-201ENST00000374885 BAZ1BQ9UIG0 1483 aaKnown RBP32.81■■■□□ 2.84
MSANTD3-201ENST00000374885 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
MSANTD3-201ENST00000374885 DNAJC5Q9H3Z4 198 aa32.75■■■□□ 2.83
MSANTD3-201ENST00000374885 CUX2O14529 1486 aa32.71■■■□□ 2.83
MSANTD3-201ENST00000374885 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
MSANTD3-201ENST00000374885 NESP48681 1621 aa32.53■■■□□ 2.8
MSANTD3-201ENST00000374885 WIZO95785 1651 aa32.44■■■□□ 2.78
MSANTD3-201ENST00000374885 LAMC3Q9Y6N6 1575 aa32.38■■■□□ 2.77
MSANTD3-201ENST00000374885 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.75
MSANTD3-201ENST00000374885 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
MSANTD3-201ENST00000374885 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
MSANTD3-201ENST00000374885 TOP2AP11388 1531 aaKnown RBP32.13■■■□□ 2.73
MSANTD3-201ENST00000374885 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
MSANTD3-201ENST00000374885 KIF21AQ7Z4S6 1674 aa32.11■■■□□ 2.73
MSANTD3-201ENST00000374885 CFTRP13569 1480 aa31.85■■■□□ 2.69
MSANTD3-201ENST00000374885 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
MSANTD3-201ENST00000374885 CEP164Q9UPV0 1460 aa31.81■■■□□ 2.68
MSANTD3-201ENST00000374885 WDR62O43379 1518 aa31.8■■■□□ 2.68
MSANTD3-201ENST00000374885 FANCD2Q9BXW9 1451 aa31.77■■■□□ 2.68
MSANTD3-201ENST00000374885 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
MSANTD3-201ENST00000374885 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
MSANTD3-201ENST00000374885 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
MSANTD3-201ENST00000374885 ABCC8Q09428 1581 aa31.26■■■□□ 2.6
MSANTD3-201ENST00000374885 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
MSANTD3-201ENST00000374885 TOPBP1Q92547 1522 aa31.21■■■□□ 2.59
MSANTD3-201ENST00000374885 DNMBPQ6XZF7 1577 aa31.19■■■□□ 2.58
MSANTD3-201ENST00000374885 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
MSANTD3-201ENST00000374885 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
MSANTD3-201ENST00000374885 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
MSANTD3-201ENST00000374885 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
MSANTD3-201ENST00000374885 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
MSANTD3-201ENST00000374885 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
MSANTD3-201ENST00000374885 POLA1P09884 1462 aaPredicted RBP30.91■■■□□ 2.54
MSANTD3-201ENST00000374885 CUX1P39880 1505 aa30.8■■■□□ 2.52
MSANTD3-201ENST00000374885 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
MSANTD3-201ENST00000374885 RIMBP3CA6NJZ7 1639 aa30.78■■■□□ 2.52
MSANTD3-201ENST00000374885 RIMBP3BA6NNM3 1639 aa30.78■■■□□ 2.52
MSANTD3-201ENST00000374885 RIMBP3Q9UFD9 1639 aa30.78■■■□□ 2.52
MSANTD3-201ENST00000374885 WDR97A6NE52 1622 aa30.77■■■□□ 2.52
MSANTD3-201ENST00000374885 SOGA1O94964 1423 aa30.76■■■□□ 2.51
MSANTD3-201ENST00000374885 AQRO60306 1485 aaKnown RBP eCLIP30.73■■■□□ 2.512e-6■■■□□ 18.3
MSANTD3-201ENST00000374885 RAD54L2Q9Y4B4 1467 aa30.73■■■□□ 2.51
MSANTD3-201ENST00000374885 ARHGEF11O15085 1522 aa30.69■■■□□ 2.5
MSANTD3-201ENST00000374885 CHD1O14646 1710 aa30.62■■■□□ 2.49
MSANTD3-201ENST00000374885 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
MSANTD3-201ENST00000374885 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.48
MSANTD3-201ENST00000374885 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
MSANTD3-201ENST00000374885 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
MSANTD3-201ENST00000374885 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
MSANTD3-201ENST00000374885 ABCA10Q8WWZ4 1543 aa30.49■■■□□ 2.47
MSANTD3-201ENST00000374885 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
MSANTD3-201ENST00000374885 FBLN2P98095 1184 aa30.48■■■□□ 2.47
MSANTD3-201ENST00000374885 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
MSANTD3-201ENST00000374885 PBRM1Q86U86 1689 aa30.47■■■□□ 2.47
MSANTD3-201ENST00000374885 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
MSANTD3-201ENST00000374885 ABCA5Q8WWZ7 1642 aa30.43■■■□□ 2.46
MSANTD3-201ENST00000374885 CYB5RLQ6IPT4 315 aa30.42■■■□□ 2.46
MSANTD3-201ENST00000374885 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
MSANTD3-201ENST00000374885 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
MSANTD3-201ENST00000374885 SYNJ2O15056 1496 aa30.36■■■□□ 2.45
MSANTD3-201ENST00000374885 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
MSANTD3-201ENST00000374885 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
MSANTD3-201ENST00000374885 ADAMTS12P58397 1594 aa30.17■■■□□ 2.42
MSANTD3-201ENST00000374885 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
MSANTD3-201ENST00000374885 GRIN2AQ12879 1464 aa30.1■■■□□ 2.41
MSANTD3-201ENST00000374885 TRHP20396 242 aaPredicted RBP30.08■■■□□ 2.41
MSANTD3-201ENST00000374885 FHAD1B1AJZ9 1412 aa30.07■■■□□ 2.4
MSANTD3-201ENST00000374885 NUP160Q12769 1436 aa29.97■■■□□ 2.39
MSANTD3-201ENST00000374885 CEP170Q5SW79 1584 aa29.95■■■□□ 2.39
MSANTD3-201ENST00000374885 KIF27Q86VH2 1401 aa29.9■■■□□ 2.38
MSANTD3-201ENST00000374885 CUL7Q14999 1698 aa29.85■■■□□ 2.37
MSANTD3-201ENST00000374885 SHROOM2Q13796 1616 aa29.83■■■□□ 2.37
MSANTD3-201ENST00000374885 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
MSANTD3-201ENST00000374885 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
MSANTD3-201ENST00000374885 IGF1RP08069 1367 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 279.8 ms