RNA–Protein interactions for RNA: ENST00000628399.1

RAD1-208, Transcript of RAD1 checkpoint DNA exonuclease, humanhuman

TSL 3 BASIC

Gene RAD1, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1-208ENST00000628399 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
RAD1-208ENST00000628399 CCDC180Q9P1Z9 1646 aa33.54■■■□□ 2.96
RAD1-208ENST00000628399 ZCCHC6Q5VYS8 1495 aaKnown RBP32.25■■■□□ 2.75
RAD1-208ENST00000628399 ABCC9O60706 1549 aa31.82■■■□□ 2.68
RAD1-208ENST00000628399 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
RAD1-208ENST00000628399 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
RAD1-208ENST00000628399 AEBP2Q6ZN18 517 aaPredicted RBP31.46■■■□□ 2.63
RAD1-208ENST00000628399 MYO15BQ96JP2 1530 aa31.43■■■□□ 2.62
RAD1-208ENST00000628399 NACADO15069 1562 aa31.26■■■□□ 2.59
RAD1-208ENST00000628399 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
RAD1-208ENST00000628399 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
RAD1-208ENST00000628399 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
RAD1-208ENST00000628399 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
RAD1-208ENST00000628399 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
RAD1-208ENST00000628399 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
RAD1-208ENST00000628399 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
RAD1-208ENST00000628399 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
RAD1-208ENST00000628399 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
RAD1-208ENST00000628399 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
RAD1-208ENST00000628399 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
RAD1-208ENST00000628399 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
RAD1-208ENST00000628399 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
RAD1-208ENST00000628399 WIZO95785 1651 aa29.46■■■□□ 2.31
RAD1-208ENST00000628399 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
RAD1-208ENST00000628399 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
RAD1-208ENST00000628399 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
RAD1-208ENST00000628399 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
RAD1-208ENST00000628399 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
RAD1-208ENST00000628399 NCAPD3P42695 1498 aa28.89■■■□□ 2.21
RAD1-208ENST00000628399 BAZ1BQ9UIG0 1483 aaKnown RBP28.89■■■□□ 2.21
RAD1-208ENST00000628399 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
RAD1-208ENST00000628399 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
RAD1-208ENST00000628399 HMGXB3Q12766 1538 aa28.8■■■□□ 2.2
RAD1-208ENST00000628399 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
RAD1-208ENST00000628399 CFTRP13569 1480 aa28.2■■■□□ 2.11
RAD1-208ENST00000628399 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
RAD1-208ENST00000628399 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
RAD1-208ENST00000628399 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
RAD1-208ENST00000628399 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
RAD1-208ENST00000628399 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.07
RAD1-208ENST00000628399 NESP48681 1621 aa27.95■■■□□ 2.06
RAD1-208ENST00000628399 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
RAD1-208ENST00000628399 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
RAD1-208ENST00000628399 TOP2BQ02880 1626 aa27.8■■■□□ 2.04
RAD1-208ENST00000628399 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
RAD1-208ENST00000628399 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
RAD1-208ENST00000628399 CUX1P39880 1505 aa27.78■■■□□ 2.04
RAD1-208ENST00000628399 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
RAD1-208ENST00000628399 SOGA1O94964 1423 aa27.64■■■□□ 2.02
RAD1-208ENST00000628399 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.01
RAD1-208ENST00000628399 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
RAD1-208ENST00000628399 KIF21AQ7Z4S6 1674 aa27.6■■■□□ 2.01
RAD1-208ENST00000628399 LOC105371045A0A1W2PR82 267 aa27.59■■■□□ 2.01
RAD1-208ENST00000628399 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
RAD1-208ENST00000628399 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
RAD1-208ENST00000628399 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
RAD1-208ENST00000628399 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
RAD1-208ENST00000628399 EEA1Q15075 1411 aa27.48■■□□□ 1.99
RAD1-208ENST00000628399 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
RAD1-208ENST00000628399 CSRNP3Q8WYN3 585 aa27.39■■□□□ 1.97
RAD1-208ENST00000628399 POLA1P09884 1462 aaPredicted RBP27.36■■□□□ 1.97
RAD1-208ENST00000628399 MRC2Q9UBG0 1479 aa27.31■■□□□ 1.96
RAD1-208ENST00000628399 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
RAD1-208ENST00000628399 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
RAD1-208ENST00000628399 KIF27Q86VH2 1401 aa27.26■■□□□ 1.95
RAD1-208ENST00000628399 CUX2O14529 1486 aa27.23■■□□□ 1.95
RAD1-208ENST00000628399 ERCC6Q03468 1493 aa27.22■■□□□ 1.95
RAD1-208ENST00000628399 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
RAD1-208ENST00000628399 WDR62O43379 1518 aa27.21■■□□□ 1.95
RAD1-208ENST00000628399 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
RAD1-208ENST00000628399 KIF21BO75037 1637 aa27.18■■□□□ 1.94
RAD1-208ENST00000628399 THOC2Q8NI27 1593 aaKnown RBP27.17■■□□□ 1.94
RAD1-208ENST00000628399 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
RAD1-208ENST00000628399 PRXQ9BXM0 1461 aa27.12■■□□□ 1.93
RAD1-208ENST00000628399 GOLGA3Q08378 1498 aa27.11■■□□□ 1.93
RAD1-208ENST00000628399 IGF1RP08069 1367 aa27.1■■□□□ 1.93
RAD1-208ENST00000628399 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.92
RAD1-208ENST00000628399 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
RAD1-208ENST00000628399 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
RAD1-208ENST00000628399 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
RAD1-208ENST00000628399 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
RAD1-208ENST00000628399 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
RAD1-208ENST00000628399 IFT140Q96RY7 1462 aa26.96■■□□□ 1.91
RAD1-208ENST00000628399 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
RAD1-208ENST00000628399 CARMIL1Q5VZK9 1371 aa26.93■■□□□ 1.9
RAD1-208ENST00000628399 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
RAD1-208ENST00000628399 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
RAD1-208ENST00000628399 CEP162Q5TB80 1403 aa26.87■■□□□ 1.89
RAD1-208ENST00000628399 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.891e-7■■■■■ 39.8
RAD1-208ENST00000628399 CUL7Q14999 1698 aa26.85■■□□□ 1.89
RAD1-208ENST00000628399 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
RAD1-208ENST00000628399 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
RAD1-208ENST00000628399 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
RAD1-208ENST00000628399 CLIP1P30622 1438 aa26.68■■□□□ 1.86
RAD1-208ENST00000628399 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
RAD1-208ENST00000628399 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
RAD1-208ENST00000628399 SNAPC4Q5SXM2 1469 aa26.58■■□□□ 1.85
RAD1-208ENST00000628399 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
RAD1-208ENST00000628399 CTTNBP2Q8WZ74 1663 aa26.56■■□□□ 1.84
RAD1-208ENST00000628399 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms