RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
AC105339.3-201ENST00000560043 CCDC180Q9P1Z9 1646 aa37.66■■■■□ 3.62
AC105339.3-201ENST00000560043 ABCC9O60706 1549 aa37.13■■■■□ 3.53
AC105339.3-201ENST00000560043 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
AC105339.3-201ENST00000560043 DCAF8L2P0C7V8 631 aa35.53■■■■□ 3.28
AC105339.3-201ENST00000560043 NACADO15069 1562 aa35.51■■■■□ 3.28
AC105339.3-201ENST00000560043 MYO15BQ96JP2 1530 aa35.22■■■■□ 3.23
AC105339.3-201ENST00000560043 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
AC105339.3-201ENST00000560043 DCAF1Q9Y4B6 1507 aa34.98■■■■□ 3.19
AC105339.3-201ENST00000560043 UNC13AQ9UPW8 1703 aa34.7■■■■□ 3.15
AC105339.3-201ENST00000560043 PABPN1Q86U42 306 aaKnown RBP eCLIP34.7■■■■□ 3.15
AC105339.3-201ENST00000560043 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
AC105339.3-201ENST00000560043 SCRIBQ14160 1630 aa34.37■■■■□ 3.09
AC105339.3-201ENST00000560043 DNAJC5BQ9UF47 199 aa34.31■■■■□ 3.08
AC105339.3-201ENST00000560043 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
AC105339.3-201ENST00000560043 EIF4G1Q04637 1599 aaKnown RBP33.62■■■□□ 2.97
AC105339.3-201ENST00000560043 CC2D2AQ9P2K1 1620 aa33.54■■■□□ 2.96
AC105339.3-201ENST00000560043 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
AC105339.3-201ENST00000560043 SMARCA4P51532 1647 aa32.84■■■□□ 2.85
AC105339.3-201ENST00000560043 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
AC105339.3-201ENST00000560043 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
AC105339.3-201ENST00000560043 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.84
AC105339.3-201ENST00000560043 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
AC105339.3-201ENST00000560043 MROH2BQ7Z745 1585 aa32.59■■■□□ 2.81
AC105339.3-201ENST00000560043 HMGXB3Q12766 1538 aa32.57■■■□□ 2.8
AC105339.3-201ENST00000560043 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
AC105339.3-201ENST00000560043 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
AC105339.3-201ENST00000560043 WIZO95785 1651 aa32.2■■■□□ 2.74
AC105339.3-201ENST00000560043 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
AC105339.3-201ENST00000560043 NESP48681 1621 aa32.04■■■□□ 2.72
AC105339.3-201ENST00000560043 ERCC6Q03468 1493 aa32.04■■■□□ 2.72
AC105339.3-201ENST00000560043 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
AC105339.3-201ENST00000560043 TOP2AP11388 1531 aaKnown RBP31.86■■■□□ 2.69
AC105339.3-201ENST00000560043 CADPSQ9ULU8 1353 aa31.84■■■□□ 2.69
AC105339.3-201ENST00000560043 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
AC105339.3-201ENST00000560043 CUX2O14529 1486 aa31.78■■■□□ 2.68
AC105339.3-201ENST00000560043 KIF21AQ7Z4S6 1674 aa31.61■■■□□ 2.65
AC105339.3-201ENST00000560043 CFTRP13569 1480 aa31.58■■■□□ 2.65
AC105339.3-201ENST00000560043 THOC2Q8NI27 1593 aaKnown RBP31.57■■■□□ 2.64
AC105339.3-201ENST00000560043 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
AC105339.3-201ENST00000560043 FANCD2Q9BXW9 1451 aa31.45■■■□□ 2.62
AC105339.3-201ENST00000560043 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
AC105339.3-201ENST00000560043 CEP164Q9UPV0 1460 aa31.43■■■□□ 2.62
AC105339.3-201ENST00000560043 WDR62O43379 1518 aa31.31■■■□□ 2.6
AC105339.3-201ENST00000560043 PRDM2Q13029 1718 aa31.23■■■□□ 2.59
AC105339.3-201ENST00000560043 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
AC105339.3-201ENST00000560043 URB2Q14146 1524 aaKnown RBP31.13■■■□□ 2.57
AC105339.3-201ENST00000560043 DNAJC5Q9H3Z4 198 aa31.12■■■□□ 2.57
AC105339.3-201ENST00000560043 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
AC105339.3-201ENST00000560043 TOPBP1Q92547 1522 aa30.91■■■□□ 2.54
AC105339.3-201ENST00000560043 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
AC105339.3-201ENST00000560043 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
AC105339.3-201ENST00000560043 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
AC105339.3-201ENST00000560043 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
AC105339.3-201ENST00000560043 CUX1P39880 1505 aa30.58■■■□□ 2.49
AC105339.3-201ENST00000560043 TARBP1Q13395 1621 aaKnown RBP30.56■■■□□ 2.48
AC105339.3-201ENST00000560043 SOGA1O94964 1423 aa30.55■■■□□ 2.48
AC105339.3-201ENST00000560043 FGD5Q6ZNL6 1462 aa30.52■■■□□ 2.48
AC105339.3-201ENST00000560043 RAD54L2Q9Y4B4 1467 aa30.51■■■□□ 2.48
AC105339.3-201ENST00000560043 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
AC105339.3-201ENST00000560043 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
AC105339.3-201ENST00000560043 AQRO60306 1485 aaKnown RBP eCLIP30.48■■■□□ 2.47
AC105339.3-201ENST00000560043 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
AC105339.3-201ENST00000560043 WRNQ14191 1432 aaPredicted RBP eCLIP30.33■■■□□ 2.45
AC105339.3-201ENST00000560043 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
AC105339.3-201ENST00000560043 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
AC105339.3-201ENST00000560043 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
AC105339.3-201ENST00000560043 BIVM-ERCC5R4GMW8 1640 aa30.23■■■□□ 2.43
AC105339.3-201ENST00000560043 SYNJ1O43426 1573 aa30.21■■■□□ 2.43
AC105339.3-201ENST00000560043 FBLN2P98095 1184 aa30.21■■■□□ 2.43
AC105339.3-201ENST00000560043 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
AC105339.3-201ENST00000560043 GAPVD1Q14C86 1478 aa30.17■■■□□ 2.42
AC105339.3-201ENST00000560043 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
AC105339.3-201ENST00000560043 CHD1O14646 1710 aa30.13■■■□□ 2.41
AC105339.3-201ENST00000560043 MAGI1Q96QZ7 1491 aaPredicted RBP30.13■■■□□ 2.41
AC105339.3-201ENST00000560043 CHMP7Q8WUX9 453 aaPredicted RBP30.09■■■□□ 2.41
AC105339.3-201ENST00000560043 ABCA5Q8WWZ7 1642 aa30.08■■■□□ 2.41
AC105339.3-201ENST00000560043 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
AC105339.3-201ENST00000560043 SYNJ2O15056 1496 aa30.02■■■□□ 2.4
AC105339.3-201ENST00000560043 TRIM41Q8WV44 630 aa30■■■□□ 2.39
AC105339.3-201ENST00000560043 RIMBP3CA6NJZ7 1639 aa29.92■■■□□ 2.38
AC105339.3-201ENST00000560043 RIMBP3BA6NNM3 1639 aa29.92■■■□□ 2.38
AC105339.3-201ENST00000560043 RIMBP3Q9UFD9 1639 aa29.92■■■□□ 2.38
AC105339.3-201ENST00000560043 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
AC105339.3-201ENST00000560043 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
AC105339.3-201ENST00000560043 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
AC105339.3-201ENST00000560043 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
AC105339.3-201ENST00000560043 FHAD1B1AJZ9 1412 aa29.82■■■□□ 2.36
AC105339.3-201ENST00000560043 GRIN2AQ12879 1464 aa29.79■■■□□ 2.36
AC105339.3-201ENST00000560043 KIF27Q86VH2 1401 aa29.73■■■□□ 2.35
AC105339.3-201ENST00000560043 CYB5RLQ6IPT4 315 aa29.71■■■□□ 2.35
AC105339.3-201ENST00000560043 NUP160Q12769 1436 aa29.67■■■□□ 2.34
AC105339.3-201ENST00000560043 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
AC105339.3-201ENST00000560043 IGF1RP08069 1367 aa29.64■■■□□ 2.34
AC105339.3-201ENST00000560043 CEP170Q5SW79 1584 aa29.63■■■□□ 2.33
AC105339.3-201ENST00000560043 CUL7Q14999 1698 aa29.52■■■□□ 2.32
AC105339.3-201ENST00000560043 CARMIL1Q5VZK9 1371 aa29.47■■■□□ 2.31
AC105339.3-201ENST00000560043 SHROOM2Q13796 1616 aa29.43■■■□□ 2.3
AC105339.3-201ENST00000560043 JPH4Q96JJ6 628 aa29.43■■■□□ 2.3
AC105339.3-201ENST00000560043 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms