RNA–Protein interactions for RNA: ENST00000301072.10

TUBA1C-201, Transcript of tubulin alpha 1c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1C, Length 3,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-201ENST00000301072 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
TUBA1C-201ENST00000301072 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
TUBA1C-201ENST00000301072 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
TUBA1C-201ENST00000301072 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
TUBA1C-201ENST00000301072 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
TUBA1C-201ENST00000301072 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
TUBA1C-201ENST00000301072 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
TUBA1C-201ENST00000301072 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
TUBA1C-201ENST00000301072 ABCC9O60706 1549 aa28.75■■■□□ 2.19
TUBA1C-201ENST00000301072 NACADO15069 1562 aa28.66■■■□□ 2.18
TUBA1C-201ENST00000301072 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
TUBA1C-201ENST00000301072 PELP1Q8IZL8 1130 aaKnown RBP28.3■■■□□ 2.12
TUBA1C-201ENST00000301072 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
TUBA1C-201ENST00000301072 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
TUBA1C-201ENST00000301072 MYT1Q01538 1121 aa27.98■■■□□ 2.07
TUBA1C-201ENST00000301072 CHIC1Q5VXU3 224 aa27.91■■■□□ 2.06
TUBA1C-201ENST00000301072 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
TUBA1C-201ENST00000301072 CECR2Q9BXF3 1484 aa27.84■■■□□ 2.05
TUBA1C-201ENST00000301072 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
TUBA1C-201ENST00000301072 BAZ1AQ9NRL2 1556 aaPredicted RBP27.59■■■□□ 2.01
TUBA1C-201ENST00000301072 WIZO95785 1651 aa27.57■■■□□ 2
TUBA1C-201ENST00000301072 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
TUBA1C-201ENST00000301072 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
TUBA1C-201ENST00000301072 TOP2AP11388 1531 aaKnown RBP27.24■■□□□ 1.95
TUBA1C-201ENST00000301072 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
TUBA1C-201ENST00000301072 PRKCSHP14314 528 aaPredicted RBP27.18■■□□□ 1.94
TUBA1C-201ENST00000301072 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
TUBA1C-201ENST00000301072 PEG3Q9GZU2 1588 aa27.08■■□□□ 1.93
TUBA1C-201ENST00000301072 SLC24A1O60721 1099 aa27.05■■□□□ 1.92
TUBA1C-201ENST00000301072 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
TUBA1C-201ENST00000301072 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
TUBA1C-201ENST00000301072 TRIM41Q8WV44 630 aa27■■□□□ 1.91
TUBA1C-201ENST00000301072 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
TUBA1C-201ENST00000301072 LOC105371045A0A1W2PR82 267 aa26.9■■□□□ 1.9
TUBA1C-201ENST00000301072 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
TUBA1C-201ENST00000301072 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
TUBA1C-201ENST00000301072 ABCC8Q09428 1581 aa26.65■■□□□ 1.86
TUBA1C-201ENST00000301072 FAM9AQ8IZU1 332 aaPredicted RBP26.55■■□□□ 1.84
TUBA1C-201ENST00000301072 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
TUBA1C-201ENST00000301072 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
TUBA1C-201ENST00000301072 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.816e-8■■□□□ 13.6
TUBA1C-201ENST00000301072 ERICH6Q7L0X2 663 aa26.33■■□□□ 1.81
TUBA1C-201ENST00000301072 APLP2Q06481 763 aa26.28■■□□□ 1.8
TUBA1C-201ENST00000301072 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
TUBA1C-201ENST00000301072 SOGA1O94964 1423 aa26.26■■□□□ 1.79
TUBA1C-201ENST00000301072 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
TUBA1C-201ENST00000301072 EEA1Q15075 1411 aa26.23■■□□□ 1.79
TUBA1C-201ENST00000301072 EHMT2Q96KQ7 1210 aa26.18■■□□□ 1.78
TUBA1C-201ENST00000301072 RUSC2Q8N2Y8 1516 aa26.15■■□□□ 1.78
TUBA1C-201ENST00000301072 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
TUBA1C-201ENST00000301072 TRIM26Q12899 539 aaPredicted RBP26.08■■□□□ 1.77
TUBA1C-201ENST00000301072 CFTRP13569 1480 aa26.06■■□□□ 1.76
TUBA1C-201ENST00000301072 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
TUBA1C-201ENST00000301072 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
TUBA1C-201ENST00000301072 CSRNP3Q8WYN3 585 aa26.05■■□□□ 1.76
TUBA1C-201ENST00000301072 BCL11AQ9H165 835 aa26■■□□□ 1.75
TUBA1C-201ENST00000301072 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
TUBA1C-201ENST00000301072 HRCP23327 699 aa25.99■■□□□ 1.75
TUBA1C-201ENST00000301072 TNIKQ9UKE5 1360 aa25.97■■□□□ 1.75
TUBA1C-201ENST00000301072 KIF21BO75037 1637 aa25.93■■□□□ 1.74
TUBA1C-201ENST00000301072 GOLGA3Q08378 1498 aa25.93■■□□□ 1.74
TUBA1C-201ENST00000301072 CEP162Q5TB80 1403 aa25.9■■□□□ 1.74
TUBA1C-201ENST00000301072 CUX1P39880 1505 aa25.89■■□□□ 1.74
TUBA1C-201ENST00000301072 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
TUBA1C-201ENST00000301072 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
TUBA1C-201ENST00000301072 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
TUBA1C-201ENST00000301072 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
TUBA1C-201ENST00000301072 PRXQ9BXM0 1461 aa25.63■■□□□ 1.69
TUBA1C-201ENST00000301072 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
TUBA1C-201ENST00000301072 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
TUBA1C-201ENST00000301072 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
TUBA1C-201ENST00000301072 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
TUBA1C-201ENST00000301072 CLIP1P30622 1438 aa25.53■■□□□ 1.68
TUBA1C-201ENST00000301072 DAXXQ9UER7 740 aaPredicted RBP25.52■■□□□ 1.68
TUBA1C-201ENST00000301072 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
TUBA1C-201ENST00000301072 NESP48681 1621 aa25.47■■□□□ 1.67
TUBA1C-201ENST00000301072 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
TUBA1C-201ENST00000301072 LAMC3Q9Y6N6 1575 aa25.46■■□□□ 1.67
TUBA1C-201ENST00000301072 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
TUBA1C-201ENST00000301072 CUX2O14529 1486 aa25.42■■□□□ 1.66
TUBA1C-201ENST00000301072 VPS8Q8N3P4 1428 aa25.41■■□□□ 1.66
TUBA1C-201ENST00000301072 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
TUBA1C-201ENST00000301072 IGF1RP08069 1367 aa25.35■■□□□ 1.65
TUBA1C-201ENST00000301072 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
TUBA1C-201ENST00000301072 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
TUBA1C-201ENST00000301072 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
TUBA1C-201ENST00000301072 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
TUBA1C-201ENST00000301072 ARAP1Q96P48 1450 aa25.27■■□□□ 1.64
TUBA1C-201ENST00000301072 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
TUBA1C-201ENST00000301072 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
TUBA1C-201ENST00000301072 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
TUBA1C-201ENST00000301072 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.62
TUBA1C-201ENST00000301072 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
TUBA1C-201ENST00000301072 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
TUBA1C-201ENST00000301072 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
TUBA1C-201ENST00000301072 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
TUBA1C-201ENST00000301072 CUL7Q14999 1698 aa25.09■■□□□ 1.61
TUBA1C-201ENST00000301072 EIF5BO60841 1220 aaKnown RBP25.06■■□□□ 1.6
TUBA1C-201ENST00000301072 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
TUBA1C-201ENST00000301072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms