RNA–Protein interactions for RNA: ENST00000547838.2

FAM109A-203, Transcript of Sesquipedalian-1, humanhuman

APPRIS P3 TSL 4 BASIC

Gene FAM109A, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM109A-203ENST00000547838 NISCHQ9Y2I1 1504 aa32.55■■■□□ 2.8
FAM109A-203ENST00000547838 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
FAM109A-203ENST00000547838 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
FAM109A-203ENST00000547838 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
FAM109A-203ENST00000547838 MYO15BQ96JP2 1530 aa27.6■■■□□ 2.01
FAM109A-203ENST00000547838 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
FAM109A-203ENST00000547838 HRCP23327 699 aa27.33■■□□□ 1.97
FAM109A-203ENST00000547838 CCDC180Q9P1Z9 1646 aa27.32■■□□□ 1.96
FAM109A-203ENST00000547838 PCGF6Q9BYE7 350 aa27.11■■□□□ 1.93
FAM109A-203ENST00000547838 DCAF8L2P0C7V8 631 aa27.09■■□□□ 1.93
FAM109A-203ENST00000547838 PPARGC1BQ86YN6 1023 aaKnown RBP26.97■■□□□ 1.91
FAM109A-203ENST00000547838 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
FAM109A-203ENST00000547838 DCAF1Q9Y4B6 1507 aa26.66■■□□□ 1.86
FAM109A-203ENST00000547838 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
FAM109A-203ENST00000547838 ABCC9O60706 1549 aa26.21■■□□□ 1.79
FAM109A-203ENST00000547838 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
FAM109A-203ENST00000547838 SCRIBQ14160 1630 aa26■■□□□ 1.75
FAM109A-203ENST00000547838 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
FAM109A-203ENST00000547838 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
FAM109A-203ENST00000547838 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
FAM109A-203ENST00000547838 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
FAM109A-203ENST00000547838 ZEB1P37275 1124 aaPredicted RBP25.75■■□□□ 1.71
FAM109A-203ENST00000547838 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
FAM109A-203ENST00000547838 CECR2Q9BXF3 1484 aa25.54■■□□□ 1.68
FAM109A-203ENST00000547838 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
FAM109A-203ENST00000547838 WIZO95785 1651 aa25.39■■□□□ 1.65
FAM109A-203ENST00000547838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.36■■□□□ 1.65
FAM109A-203ENST00000547838 PELP1Q8IZL8 1130 aaKnown RBP25.25■■□□□ 1.63
FAM109A-203ENST00000547838 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
FAM109A-203ENST00000547838 CCER1Q8TC90 406 aaPredicted RBP25.19■■□□□ 1.62
FAM109A-203ENST00000547838 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
FAM109A-203ENST00000547838 NACADO15069 1562 aa25.14■■□□□ 1.61
FAM109A-203ENST00000547838 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
FAM109A-203ENST00000547838 NEUROD1Q13562 356 aa25.12■■□□□ 1.61
FAM109A-203ENST00000547838 ACIN1Q9UKV3 1341 aaKnown RBP25.08■■□□□ 1.6
FAM109A-203ENST00000547838 ABCC8Q09428 1581 aa25.06■■□□□ 1.6
FAM109A-203ENST00000547838 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
FAM109A-203ENST00000547838 DIEXFQ68CQ4 756 aaKnown RBP24.95■■□□□ 1.59
FAM109A-203ENST00000547838 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
FAM109A-203ENST00000547838 GTF3C3Q9Y5Q9 886 aa24.88■■□□□ 1.57
FAM109A-203ENST00000547838 SOGA1O94964 1423 aa24.87■■□□□ 1.57
FAM109A-203ENST00000547838 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
FAM109A-203ENST00000547838 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
FAM109A-203ENST00000547838 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
FAM109A-203ENST00000547838 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
FAM109A-203ENST00000547838 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
FAM109A-203ENST00000547838 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
FAM109A-203ENST00000547838 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.55
FAM109A-203ENST00000547838 UBTFP17480 764 aaKnown RBP24.64■■□□□ 1.54
FAM109A-203ENST00000547838 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
FAM109A-203ENST00000547838 ZNF316A6NFI3 1004 aaPredicted RBP24.59■■□□□ 1.53
FAM109A-203ENST00000547838 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
FAM109A-203ENST00000547838 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
FAM109A-203ENST00000547838 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
FAM109A-203ENST00000547838 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
FAM109A-203ENST00000547838 EEA1Q15075 1411 aa24.49■■□□□ 1.51
FAM109A-203ENST00000547838 MIER1Q8N108 512 aa24.45■■□□□ 1.5
FAM109A-203ENST00000547838 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
FAM109A-203ENST00000547838 CLIP1P30622 1438 aa24.3■■□□□ 1.48
FAM109A-203ENST00000547838 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
FAM109A-203ENST00000547838 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
FAM109A-203ENST00000547838 KIF21BO75037 1637 aa24.28■■□□□ 1.48
FAM109A-203ENST00000547838 RANGAP1P46060 587 aaPredicted RBP24.28■■□□□ 1.48
FAM109A-203ENST00000547838 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
FAM109A-203ENST00000547838 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
FAM109A-203ENST00000547838 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
FAM109A-203ENST00000547838 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
FAM109A-203ENST00000547838 APLP2Q06481 763 aa24.06■■□□□ 1.44
FAM109A-203ENST00000547838 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
FAM109A-203ENST00000547838 DHX57Q6P158 1386 aaKnown RBP23.98■■□□□ 1.43
FAM109A-203ENST00000547838 MYT1Q01538 1121 aa23.98■■□□□ 1.43
FAM109A-203ENST00000547838 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
FAM109A-203ENST00000547838 KANK4Q5T7N3 995 aaPredicted RBP23.92■■□□□ 1.42
FAM109A-203ENST00000547838 ARAP1Q96P48 1450 aa23.92■■□□□ 1.42
FAM109A-203ENST00000547838 TOP2BQ02880 1626 aa23.89■■□□□ 1.41
FAM109A-203ENST00000547838 SUPT16HQ9Y5B9 1047 aaKnown RBP23.82■■□□□ 1.4
FAM109A-203ENST00000547838 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
FAM109A-203ENST00000547838 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
FAM109A-203ENST00000547838 CLSPNQ9HAW4 1339 aa23.77■■□□□ 1.4
FAM109A-203ENST00000547838 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
FAM109A-203ENST00000547838 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
FAM109A-203ENST00000547838 ITGAEP38570 1179 aa23.7■■□□□ 1.39
FAM109A-203ENST00000547838 KCNH8Q96L42 1107 aa23.69■■□□□ 1.38
FAM109A-203ENST00000547838 CUX1P39880 1505 aa23.65■■□□□ 1.38
FAM109A-203ENST00000547838 CUX2O14529 1486 aa23.61■■□□□ 1.37
FAM109A-203ENST00000547838 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
FAM109A-203ENST00000547838 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
FAM109A-203ENST00000547838 TSHZ2Q9NRE2 1034 aa23.58■■□□□ 1.36
FAM109A-203ENST00000547838 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
FAM109A-203ENST00000547838 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
FAM109A-203ENST00000547838 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
FAM109A-203ENST00000547838 BCANQ96GW7 911 aa23.47■■□□□ 1.35
FAM109A-203ENST00000547838 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
FAM109A-203ENST00000547838 SIN3AQ96ST3 1273 aa23.41■■□□□ 1.34
FAM109A-203ENST00000547838 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
FAM109A-203ENST00000547838 DDX10Q13206 875 aaKnown RBP23.38■■□□□ 1.33
FAM109A-203ENST00000547838 PHLDB1Q86UU1 1377 aa23.36■■□□□ 1.33
FAM109A-203ENST00000547838 HIRIP3Q9BW71 556 aaPredicted RBP23.35■■□□□ 1.33
FAM109A-203ENST00000547838 HMGXB3Q12766 1538 aa23.33■■□□□ 1.33
FAM109A-203ENST00000547838 SETD5Q9C0A6 1442 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms