RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
CTCFL-215ENST00000608158 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
CTCFL-215ENST00000608158 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
CTCFL-215ENST00000608158 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
CTCFL-215ENST00000608158 ABCC9O60706 1549 aa30.91■■■□□ 2.54
CTCFL-215ENST00000608158 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
CTCFL-215ENST00000608158 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
CTCFL-215ENST00000608158 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
CTCFL-215ENST00000608158 NACADO15069 1562 aa30.48■■■□□ 2.47
CTCFL-215ENST00000608158 RB1CC1Q8TDY2 1594 aa30.21■■■□□ 2.43
CTCFL-215ENST00000608158 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
CTCFL-215ENST00000608158 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
CTCFL-215ENST00000608158 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
CTCFL-215ENST00000608158 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
CTCFL-215ENST00000608158 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
CTCFL-215ENST00000608158 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
CTCFL-215ENST00000608158 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
CTCFL-215ENST00000608158 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
CTCFL-215ENST00000608158 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
CTCFL-215ENST00000608158 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
CTCFL-215ENST00000608158 WIZO95785 1651 aa28.8■■■□□ 2.2
CTCFL-215ENST00000608158 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
CTCFL-215ENST00000608158 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
CTCFL-215ENST00000608158 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
CTCFL-215ENST00000608158 ATAD2BQ9ULI0 1458 aa28.39■■■□□ 2.14
CTCFL-215ENST00000608158 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
CTCFL-215ENST00000608158 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
CTCFL-215ENST00000608158 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
CTCFL-215ENST00000608158 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
CTCFL-215ENST00000608158 HMGXB3Q12766 1538 aa28.14■■■□□ 2.09
CTCFL-215ENST00000608158 NCAPD3P42695 1498 aa28.13■■■□□ 2.09
CTCFL-215ENST00000608158 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
CTCFL-215ENST00000608158 TRIM41Q8WV44 630 aa27.7■■■□□ 2.03
CTCFL-215ENST00000608158 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
CTCFL-215ENST00000608158 CFTRP13569 1480 aa27.53■■■□□ 2
CTCFL-215ENST00000608158 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
CTCFL-215ENST00000608158 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
CTCFL-215ENST00000608158 CADPSQ9ULU8 1353 aa27.39■■□□□ 1.98
CTCFL-215ENST00000608158 SYNJ1O43426 1573 aa27.37■■□□□ 1.97
CTCFL-215ENST00000608158 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
CTCFL-215ENST00000608158 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
CTCFL-215ENST00000608158 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
CTCFL-215ENST00000608158 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.95
CTCFL-215ENST00000608158 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
CTCFL-215ENST00000608158 CUX1P39880 1505 aa27.17■■□□□ 1.94
CTCFL-215ENST00000608158 NESP48681 1621 aa27.16■■□□□ 1.94
CTCFL-215ENST00000608158 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
CTCFL-215ENST00000608158 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
CTCFL-215ENST00000608158 SOGA1O94964 1423 aa27.11■■□□□ 1.93
CTCFL-215ENST00000608158 EEA1Q15075 1411 aa27.09■■□□□ 1.93
CTCFL-215ENST00000608158 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
CTCFL-215ENST00000608158 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
CTCFL-215ENST00000608158 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
CTCFL-215ENST00000608158 DNMBPQ6XZF7 1577 aa26.91■■□□□ 1.9
CTCFL-215ENST00000608158 CSRNP3Q8WYN3 585 aa26.86■■□□□ 1.89
CTCFL-215ENST00000608158 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
CTCFL-215ENST00000608158 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
CTCFL-215ENST00000608158 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
CTCFL-215ENST00000608158 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
CTCFL-215ENST00000608158 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
CTCFL-215ENST00000608158 KIF21BO75037 1637 aa26.76■■□□□ 1.87
CTCFL-215ENST00000608158 KIF27Q86VH2 1401 aa26.75■■□□□ 1.87
CTCFL-215ENST00000608158 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
CTCFL-215ENST00000608158 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
CTCFL-215ENST00000608158 CUX2O14529 1486 aa26.69■■□□□ 1.86
CTCFL-215ENST00000608158 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
CTCFL-215ENST00000608158 TNIKQ9UKE5 1360 aa26.62■■□□□ 1.85
CTCFL-215ENST00000608158 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
CTCFL-215ENST00000608158 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
CTCFL-215ENST00000608158 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
CTCFL-215ENST00000608158 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
CTCFL-215ENST00000608158 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
CTCFL-215ENST00000608158 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
CTCFL-215ENST00000608158 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
CTCFL-215ENST00000608158 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
CTCFL-215ENST00000608158 WDR62O43379 1518 aa26.51■■□□□ 1.83
CTCFL-215ENST00000608158 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
CTCFL-215ENST00000608158 IGF1RP08069 1367 aa26.47■■□□□ 1.83
CTCFL-215ENST00000608158 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
CTCFL-215ENST00000608158 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
CTCFL-215ENST00000608158 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
CTCFL-215ENST00000608158 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
CTCFL-215ENST00000608158 CUL7Q14999 1698 aa26.33■■□□□ 1.81
CTCFL-215ENST00000608158 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
CTCFL-215ENST00000608158 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
CTCFL-215ENST00000608158 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
CTCFL-215ENST00000608158 CLIP1P30622 1438 aa26.29■■□□□ 1.8
CTCFL-215ENST00000608158 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
CTCFL-215ENST00000608158 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
CTCFL-215ENST00000608158 AQRO60306 1485 aaKnown RBP eCLIP26.16■■□□□ 1.781e-7■■■■□ 21.1
CTCFL-215ENST00000608158 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
CTCFL-215ENST00000608158 EIF4G3O43432 1585 aaKnown RBP26.1■■□□□ 1.77
CTCFL-215ENST00000608158 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
CTCFL-215ENST00000608158 VPS8Q8N3P4 1428 aa26.08■■□□□ 1.77
CTCFL-215ENST00000608158 RANGAP1P46060 587 aaPredicted RBP26.07■■□□□ 1.76
CTCFL-215ENST00000608158 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
CTCFL-215ENST00000608158 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
CTCFL-215ENST00000608158 CTTNBP2Q8WZ74 1663 aa26.03■■□□□ 1.76
CTCFL-215ENST00000608158 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
CTCFL-215ENST00000608158 SNAPC4Q5SXM2 1469 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms