RNA–Protein interactions for RNA: ENST00000020945.3

SNAI2-201, Transcript of snail family transcriptional repressor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI2, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2-201ENST00000020945 NISCHQ9Y2I1 1504 aa37.03■■■■□ 3.52
SNAI2-201ENST00000020945 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
SNAI2-201ENST00000020945 ZCCHC6Q5VYS8 1495 aaKnown RBP31.1■■■□□ 2.57
SNAI2-201ENST00000020945 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
SNAI2-201ENST00000020945 DCAF1Q9Y4B6 1507 aa30.53■■■□□ 2.48
SNAI2-201ENST00000020945 ABCC9O60706 1549 aa30.46■■■□□ 2.47
SNAI2-201ENST00000020945 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
SNAI2-201ENST00000020945 MYO15BQ96JP2 1530 aa30.11■■■□□ 2.41
SNAI2-201ENST00000020945 NACADO15069 1562 aa29.94■■■□□ 2.38
SNAI2-201ENST00000020945 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
SNAI2-201ENST00000020945 RB1CC1Q8TDY2 1594 aa29.67■■■□□ 2.34
SNAI2-201ENST00000020945 SUPT5HO00267 1087 aaKnown RBP29.35■■■□□ 2.29
SNAI2-201ENST00000020945 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
SNAI2-201ENST00000020945 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
SNAI2-201ENST00000020945 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
SNAI2-201ENST00000020945 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
SNAI2-201ENST00000020945 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
SNAI2-201ENST00000020945 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
SNAI2-201ENST00000020945 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
SNAI2-201ENST00000020945 WIZO95785 1651 aa28.45■■■□□ 2.15
SNAI2-201ENST00000020945 SMARCA4P51532 1647 aa28.44■■■□□ 2.14
SNAI2-201ENST00000020945 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
SNAI2-201ENST00000020945 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
SNAI2-201ENST00000020945 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
SNAI2-201ENST00000020945 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
SNAI2-201ENST00000020945 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
SNAI2-201ENST00000020945 SMARCA2P51531 1590 aa27.89■■■□□ 2.05
SNAI2-201ENST00000020945 CCDC88BA6NC98 1476 aa27.86■■■□□ 2.05
SNAI2-201ENST00000020945 BAZ1BQ9UIG0 1483 aaKnown RBP27.79■■■□□ 2.04
SNAI2-201ENST00000020945 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
SNAI2-201ENST00000020945 HMGXB3Q12766 1538 aa27.6■■■□□ 2.01
SNAI2-201ENST00000020945 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
SNAI2-201ENST00000020945 TRIM41Q8WV44 630 aa27.51■■■□□ 2
SNAI2-201ENST00000020945 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
SNAI2-201ENST00000020945 LOC105371045A0A1W2PR82 267 aa27.12■■□□□ 1.93
SNAI2-201ENST00000020945 FAM9AQ8IZU1 332 aaPredicted RBP27.11■■□□□ 1.93
SNAI2-201ENST00000020945 CFTRP13569 1480 aa27.1■■□□□ 1.93
SNAI2-201ENST00000020945 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
SNAI2-201ENST00000020945 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
SNAI2-201ENST00000020945 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
SNAI2-201ENST00000020945 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
SNAI2-201ENST00000020945 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
SNAI2-201ENST00000020945 SOGA1O94964 1423 aa26.86■■□□□ 1.89
SNAI2-201ENST00000020945 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
SNAI2-201ENST00000020945 NESP48681 1621 aa26.8■■□□□ 1.88
SNAI2-201ENST00000020945 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
SNAI2-201ENST00000020945 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
SNAI2-201ENST00000020945 RUSC2Q8N2Y8 1516 aa26.78■■□□□ 1.88
SNAI2-201ENST00000020945 CUX1P39880 1505 aa26.77■■□□□ 1.88
SNAI2-201ENST00000020945 FANCD2Q9BXW9 1451 aa26.7■■□□□ 1.86
SNAI2-201ENST00000020945 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
SNAI2-201ENST00000020945 EEA1Q15075 1411 aa26.68■■□□□ 1.86
SNAI2-201ENST00000020945 CSRNP3Q8WYN3 585 aa26.65■■□□□ 1.86
SNAI2-201ENST00000020945 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
SNAI2-201ENST00000020945 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
SNAI2-201ENST00000020945 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
SNAI2-201ENST00000020945 DNMBPQ6XZF7 1577 aa26.45■■□□□ 1.82
SNAI2-201ENST00000020945 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
SNAI2-201ENST00000020945 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
SNAI2-201ENST00000020945 URB2Q14146 1524 aaKnown RBP26.38■■□□□ 1.81
SNAI2-201ENST00000020945 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
SNAI2-201ENST00000020945 GOLGA3Q08378 1498 aa26.37■■□□□ 1.81
SNAI2-201ENST00000020945 KIF21BO75037 1637 aa26.37■■□□□ 1.81
SNAI2-201ENST00000020945 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
SNAI2-201ENST00000020945 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.81
SNAI2-201ENST00000020945 CUX2O14529 1486 aa26.32■■□□□ 1.8
SNAI2-201ENST00000020945 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
SNAI2-201ENST00000020945 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
SNAI2-201ENST00000020945 RAPGEF2Q9Y4G8 1499 aa26.28■■□□□ 1.8
SNAI2-201ENST00000020945 PRXQ9BXM0 1461 aa26.24■■□□□ 1.79
SNAI2-201ENST00000020945 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
SNAI2-201ENST00000020945 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
SNAI2-201ENST00000020945 IGF1RP08069 1367 aa26.18■■□□□ 1.78
SNAI2-201ENST00000020945 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
SNAI2-201ENST00000020945 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
SNAI2-201ENST00000020945 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
SNAI2-201ENST00000020945 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
SNAI2-201ENST00000020945 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
SNAI2-201ENST00000020945 CARMIL1Q5VZK9 1371 aa26.04■■□□□ 1.76
SNAI2-201ENST00000020945 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
SNAI2-201ENST00000020945 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.76
SNAI2-201ENST00000020945 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
SNAI2-201ENST00000020945 WDR62O43379 1518 aa26■■□□□ 1.75
SNAI2-201ENST00000020945 CLIP1P30622 1438 aa25.99■■□□□ 1.75
SNAI2-201ENST00000020945 RANGAP1P46060 587 aaPredicted RBP25.98■■□□□ 1.75
SNAI2-201ENST00000020945 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
SNAI2-201ENST00000020945 GAPVD1Q14C86 1478 aa25.94■■□□□ 1.74
SNAI2-201ENST00000020945 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
SNAI2-201ENST00000020945 CUL7Q14999 1698 aa25.88■■□□□ 1.73
SNAI2-201ENST00000020945 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
SNAI2-201ENST00000020945 HRCP23327 699 aa25.85■■□□□ 1.73
SNAI2-201ENST00000020945 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
SNAI2-201ENST00000020945 AQRO60306 1485 aaKnown RBP eCLIP25.84■■□□□ 1.73
SNAI2-201ENST00000020945 ZNF608Q9ULD9 1512 aaPredicted RBP25.79■■□□□ 1.72
SNAI2-201ENST00000020945 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
SNAI2-201ENST00000020945 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
SNAI2-201ENST00000020945 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
SNAI2-201ENST00000020945 ARHGAP35Q9NRY4 1499 aa25.71■■□□□ 1.71
SNAI2-201ENST00000020945 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
SNAI2-201ENST00000020945 CTTNBP2Q8WZ74 1663 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms