RNA–Protein interactions for RNA: ENST00000372611.5

SLFNL1-203, Transcript of schlafen like 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SLFNL1, Length 1,865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-203ENST00000372611 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
SLFNL1-203ENST00000372611 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
SLFNL1-203ENST00000372611 ABCC9O60706 1549 aa30.38■■■□□ 2.45
SLFNL1-203ENST00000372611 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
SLFNL1-203ENST00000372611 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
SLFNL1-203ENST00000372611 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
SLFNL1-203ENST00000372611 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
SLFNL1-203ENST00000372611 NACADO15069 1562 aa29.37■■■□□ 2.29
SLFNL1-203ENST00000372611 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
SLFNL1-203ENST00000372611 MYO15BQ96JP2 1530 aa29.28■■■□□ 2.28
SLFNL1-203ENST00000372611 UNC13AQ9UPW8 1703 aa28.78■■■□□ 2.2
SLFNL1-203ENST00000372611 SCRIBQ14160 1630 aa28.77■■■□□ 2.2
SLFNL1-203ENST00000372611 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
SLFNL1-203ENST00000372611 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
SLFNL1-203ENST00000372611 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
SLFNL1-203ENST00000372611 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
SLFNL1-203ENST00000372611 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
SLFNL1-203ENST00000372611 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
SLFNL1-203ENST00000372611 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
SLFNL1-203ENST00000372611 MROH2BQ7Z745 1585 aa27.58■■■□□ 2.01
SLFNL1-203ENST00000372611 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
SLFNL1-203ENST00000372611 SMARCA4P51532 1647 aa27.51■■□□□ 1.99
SLFNL1-203ENST00000372611 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
SLFNL1-203ENST00000372611 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
SLFNL1-203ENST00000372611 WIZO95785 1651 aa27.35■■□□□ 1.97
SLFNL1-203ENST00000372611 ATAD2BQ9ULI0 1458 aa27.23■■□□□ 1.95
SLFNL1-203ENST00000372611 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
SLFNL1-203ENST00000372611 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
SLFNL1-203ENST00000372611 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
SLFNL1-203ENST00000372611 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
SLFNL1-203ENST00000372611 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
SLFNL1-203ENST00000372611 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
SLFNL1-203ENST00000372611 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
SLFNL1-203ENST00000372611 CCDC88BA6NC98 1476 aa26.87■■□□□ 1.89
SLFNL1-203ENST00000372611 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
SLFNL1-203ENST00000372611 NESP48681 1621 aa26.44■■□□□ 1.82
SLFNL1-203ENST00000372611 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
SLFNL1-203ENST00000372611 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
SLFNL1-203ENST00000372611 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
SLFNL1-203ENST00000372611 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
SLFNL1-203ENST00000372611 CFTRP13569 1480 aa26.29■■□□□ 1.8
SLFNL1-203ENST00000372611 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
SLFNL1-203ENST00000372611 EEA1Q15075 1411 aa26.24■■□□□ 1.79
SLFNL1-203ENST00000372611 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
SLFNL1-203ENST00000372611 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
SLFNL1-203ENST00000372611 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
SLFNL1-203ENST00000372611 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
SLFNL1-203ENST00000372611 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
SLFNL1-203ENST00000372611 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
SLFNL1-203ENST00000372611 SOGA1O94964 1423 aa26.05■■□□□ 1.76
SLFNL1-203ENST00000372611 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
SLFNL1-203ENST00000372611 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
SLFNL1-203ENST00000372611 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
SLFNL1-203ENST00000372611 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
SLFNL1-203ENST00000372611 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
SLFNL1-203ENST00000372611 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
SLFNL1-203ENST00000372611 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
SLFNL1-203ENST00000372611 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
SLFNL1-203ENST00000372611 TRIM26Q12899 539 aaPredicted RBP25.87■■□□□ 1.73
SLFNL1-203ENST00000372611 TNIKQ9UKE5 1360 aa25.87■■□□□ 1.73
SLFNL1-203ENST00000372611 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
SLFNL1-203ENST00000372611 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
SLFNL1-203ENST00000372611 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
SLFNL1-203ENST00000372611 KIF21BO75037 1637 aa25.78■■□□□ 1.72
SLFNL1-203ENST00000372611 CUX1P39880 1505 aa25.77■■□□□ 1.72
SLFNL1-203ENST00000372611 WDR62O43379 1518 aa25.76■■□□□ 1.71
SLFNL1-203ENST00000372611 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
SLFNL1-203ENST00000372611 CEP162Q5TB80 1403 aa25.72■■□□□ 1.71
SLFNL1-203ENST00000372611 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
SLFNL1-203ENST00000372611 UBTFP17480 764 aaKnown RBP25.67■■□□□ 1.7
SLFNL1-203ENST00000372611 HRCP23327 699 aa25.61■■□□□ 1.69
SLFNL1-203ENST00000372611 CUX2O14529 1486 aa25.6■■□□□ 1.69
SLFNL1-203ENST00000372611 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
SLFNL1-203ENST00000372611 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
SLFNL1-203ENST00000372611 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
SLFNL1-203ENST00000372611 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
SLFNL1-203ENST00000372611 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
SLFNL1-203ENST00000372611 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
SLFNL1-203ENST00000372611 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
SLFNL1-203ENST00000372611 CLIP1P30622 1438 aa25.42■■□□□ 1.66
SLFNL1-203ENST00000372611 TARBP1Q13395 1621 aaKnown RBP25.42■■□□□ 1.66
SLFNL1-203ENST00000372611 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
SLFNL1-203ENST00000372611 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
SLFNL1-203ENST00000372611 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
SLFNL1-203ENST00000372611 IGF1RP08069 1367 aa25.29■■□□□ 1.64
SLFNL1-203ENST00000372611 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
SLFNL1-203ENST00000372611 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
SLFNL1-203ENST00000372611 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
SLFNL1-203ENST00000372611 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
SLFNL1-203ENST00000372611 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
SLFNL1-203ENST00000372611 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
SLFNL1-203ENST00000372611 CARMIL1Q5VZK9 1371 aa25.18■■□□□ 1.62
SLFNL1-203ENST00000372611 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
SLFNL1-203ENST00000372611 ZEB1P37275 1124 aaPredicted RBP25.16■■□□□ 1.62
SLFNL1-203ENST00000372611 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
SLFNL1-203ENST00000372611 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
SLFNL1-203ENST00000372611 APLP2Q06481 763 aa25.09■■□□□ 1.61
SLFNL1-203ENST00000372611 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
SLFNL1-203ENST00000372611 GRIN2BQ13224 1484 aa25.06■■□□□ 1.6
SLFNL1-203ENST00000372611 CUL7Q14999 1698 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms