RNA–Protein interactions for RNA: ENST00000370207.4

F3-202, Transcript of coagulation factor III, tissue factor, humanhuman

TSL 1 (best) BASIC

Gene F3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
F3-202ENST00000370207 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
F3-202ENST00000370207 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
F3-202ENST00000370207 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
F3-202ENST00000370207 DCAF1Q9Y4B6 1507 aa30.33■■■□□ 2.45
F3-202ENST00000370207 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
F3-202ENST00000370207 SHROOM4Q9ULL8 1493 aa30.14■■■□□ 2.42
F3-202ENST00000370207 ABCC9O60706 1549 aa29.88■■■□□ 2.37
F3-202ENST00000370207 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
F3-202ENST00000370207 NACADO15069 1562 aa29.6■■■□□ 2.33
F3-202ENST00000370207 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
F3-202ENST00000370207 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
F3-202ENST00000370207 SUPT5HO00267 1087 aaKnown RBP29.14■■■□□ 2.26
F3-202ENST00000370207 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
F3-202ENST00000370207 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
F3-202ENST00000370207 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
F3-202ENST00000370207 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
F3-202ENST00000370207 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
F3-202ENST00000370207 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
F3-202ENST00000370207 PABPN1Q86U42 306 aaKnown RBP eCLIP28.24■■■□□ 2.11
F3-202ENST00000370207 WIZO95785 1651 aa28.15■■■□□ 2.1
F3-202ENST00000370207 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
F3-202ENST00000370207 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
F3-202ENST00000370207 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
F3-202ENST00000370207 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
F3-202ENST00000370207 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
F3-202ENST00000370207 SMARCA2P51531 1590 aa27.61■■■□□ 2.01
F3-202ENST00000370207 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
F3-202ENST00000370207 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
F3-202ENST00000370207 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
F3-202ENST00000370207 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
F3-202ENST00000370207 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
F3-202ENST00000370207 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
F3-202ENST00000370207 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
F3-202ENST00000370207 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
F3-202ENST00000370207 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
F3-202ENST00000370207 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.89
F3-202ENST00000370207 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.89
F3-202ENST00000370207 CFTRP13569 1480 aa26.8■■□□□ 1.88
F3-202ENST00000370207 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
F3-202ENST00000370207 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
F3-202ENST00000370207 SOGA1O94964 1423 aa26.65■■□□□ 1.86
F3-202ENST00000370207 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
F3-202ENST00000370207 EEA1Q15075 1411 aa26.64■■□□□ 1.86
F3-202ENST00000370207 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
F3-202ENST00000370207 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
F3-202ENST00000370207 RUSC2Q8N2Y8 1516 aa26.54■■□□□ 1.84
F3-202ENST00000370207 CUX1P39880 1505 aa26.5■■□□□ 1.83
F3-202ENST00000370207 EHMT2Q96KQ7 1210 aa26.5■■□□□ 1.83
F3-202ENST00000370207 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
F3-202ENST00000370207 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
F3-202ENST00000370207 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
F3-202ENST00000370207 NESP48681 1621 aa26.33■■□□□ 1.81
F3-202ENST00000370207 GOLGA3Q08378 1498 aa26.3■■□□□ 1.8
F3-202ENST00000370207 DNAJC5BQ9UF47 199 aa26.3■■□□□ 1.8
F3-202ENST00000370207 KIF21BO75037 1637 aa26.29■■□□□ 1.8
F3-202ENST00000370207 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
F3-202ENST00000370207 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
F3-202ENST00000370207 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
F3-202ENST00000370207 DNMBPQ6XZF7 1577 aa26.17■■□□□ 1.78
F3-202ENST00000370207 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
F3-202ENST00000370207 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
F3-202ENST00000370207 CEP162Q5TB80 1403 aa26.16■■□□□ 1.78
F3-202ENST00000370207 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
F3-202ENST00000370207 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
F3-202ENST00000370207 RAPGEF2Q9Y4G8 1499 aa26.1■■□□□ 1.77
F3-202ENST00000370207 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
F3-202ENST00000370207 ERICH3Q5RHP9 1530 aa26.06■■□□□ 1.76
F3-202ENST00000370207 CUX2O14529 1486 aa26.05■■□□□ 1.76
F3-202ENST00000370207 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
F3-202ENST00000370207 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
F3-202ENST00000370207 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
F3-202ENST00000370207 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
F3-202ENST00000370207 TRIM26Q12899 539 aaPredicted RBP25.98■■□□□ 1.75
F3-202ENST00000370207 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
F3-202ENST00000370207 IGF1RP08069 1367 aa25.93■■□□□ 1.74
F3-202ENST00000370207 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
F3-202ENST00000370207 CLIP1P30622 1438 aa25.89■■□□□ 1.73
F3-202ENST00000370207 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
F3-202ENST00000370207 CARMIL1Q5VZK9 1371 aa25.8■■□□□ 1.72
F3-202ENST00000370207 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
F3-202ENST00000370207 ABCA5Q8WWZ7 1642 aa25.71■■□□□ 1.71
F3-202ENST00000370207 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
F3-202ENST00000370207 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
F3-202ENST00000370207 TARBP1Q13395 1621 aaKnown RBP25.69■■□□□ 1.7
F3-202ENST00000370207 CUL7Q14999 1698 aa25.69■■□□□ 1.7
F3-202ENST00000370207 RANGAP1P46060 587 aaPredicted RBP25.66■■□□□ 1.7
F3-202ENST00000370207 TDRD9Q8NDG6 1382 aaKnown RBP25.64■■□□□ 1.7
F3-202ENST00000370207 WDR62O43379 1518 aa25.64■■□□□ 1.7
F3-202ENST00000370207 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.7
F3-202ENST00000370207 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
F3-202ENST00000370207 ERCC6Q03468 1493 aa25.58■■□□□ 1.69
F3-202ENST00000370207 ARHGAP35Q9NRY4 1499 aa25.55■■□□□ 1.68
F3-202ENST00000370207 HRCP23327 699 aa25.53■■□□□ 1.68
F3-202ENST00000370207 IFT140Q96RY7 1462 aa25.51■■□□□ 1.67
F3-202ENST00000370207 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
F3-202ENST00000370207 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
F3-202ENST00000370207 CTTNBP2Q8WZ74 1663 aa25.45■■□□□ 1.66
F3-202ENST00000370207 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
F3-202ENST00000370207 APLP2Q06481 763 aa25.44■■□□□ 1.66
F3-202ENST00000370207 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.663e-7■■■■□ 26.2
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms