RNA–Protein interactions for RNA: ENST00000619060.1

PHLDA1-203, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-203ENST00000619060 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
PHLDA1-203ENST00000619060 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
PHLDA1-203ENST00000619060 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
PHLDA1-203ENST00000619060 SHROOM4Q9ULL8 1493 aa24.5■■□□□ 1.51
PHLDA1-203ENST00000619060 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
PHLDA1-203ENST00000619060 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
PHLDA1-203ENST00000619060 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
PHLDA1-203ENST00000619060 APLP2Q06481 763 aa23.73■■□□□ 1.39
PHLDA1-203ENST00000619060 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
PHLDA1-203ENST00000619060 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
PHLDA1-203ENST00000619060 ERICH6Q7L0X2 663 aa23.46■■□□□ 1.35
PHLDA1-203ENST00000619060 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
PHLDA1-203ENST00000619060 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
PHLDA1-203ENST00000619060 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
PHLDA1-203ENST00000619060 MYT1Q01538 1121 aa23.12■■□□□ 1.29
PHLDA1-203ENST00000619060 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
PHLDA1-203ENST00000619060 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
PHLDA1-203ENST00000619060 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
PHLDA1-203ENST00000619060 ATP1B4Q9UN42 357 aaPredicted RBP22.99■■□□□ 1.27
PHLDA1-203ENST00000619060 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
PHLDA1-203ENST00000619060 PPARGC1BQ86YN6 1023 aaKnown RBP22.79■■□□□ 1.24
PHLDA1-203ENST00000619060 NEFLP07196 543 aa22.76■■□□□ 1.23
PHLDA1-203ENST00000619060 TRIM26Q12899 539 aaPredicted RBP22.44■■□□□ 1.18
PHLDA1-203ENST00000619060 HRCP23327 699 aa22.35■■□□□ 1.17
PHLDA1-203ENST00000619060 ITGAEP38570 1179 aa22.3■■□□□ 1.16
PHLDA1-203ENST00000619060 POLR3GLQ9BT43 218 aa22.25■■□□□ 1.15
PHLDA1-203ENST00000619060 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
PHLDA1-203ENST00000619060 DAXXQ9UER7 740 aaPredicted RBP22.16■■□□□ 1.14
PHLDA1-203ENST00000619060 CNGB1Q14028 1251 aaPredicted RBP22.15■■□□□ 1.14
PHLDA1-203ENST00000619060 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
PHLDA1-203ENST00000619060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.11
PHLDA1-203ENST00000619060 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
PHLDA1-203ENST00000619060 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
PHLDA1-203ENST00000619060 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
PHLDA1-203ENST00000619060 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.08
PHLDA1-203ENST00000619060 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
PHLDA1-203ENST00000619060 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
PHLDA1-203ENST00000619060 BCANQ96GW7 911 aa21.66■■□□□ 1.06
PHLDA1-203ENST00000619060 CLSPNQ9HAW4 1339 aa21.66■■□□□ 1.06
PHLDA1-203ENST00000619060 FAM50AQ14320 339 aaKnown RBP21.61■■□□□ 1.05
PHLDA1-203ENST00000619060 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.04
PHLDA1-203ENST00000619060 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
PHLDA1-203ENST00000619060 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
PHLDA1-203ENST00000619060 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
PHLDA1-203ENST00000619060 ANP32CO43423 234 aa21.34■■□□□ 1.01
PHLDA1-203ENST00000619060 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1
PHLDA1-203ENST00000619060 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
PHLDA1-203ENST00000619060 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
PHLDA1-203ENST00000619060 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
PHLDA1-203ENST00000619060 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
PHLDA1-203ENST00000619060 CANXP27824 592 aaKnown RBP21.1■□□□□ 0.97
PHLDA1-203ENST00000619060 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
PHLDA1-203ENST00000619060 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.96
PHLDA1-203ENST00000619060 SLC24A1O60721 1099 aa21.02■□□□□ 0.95
PHLDA1-203ENST00000619060 ARID3CA6NKF2 412 aa21■□□□□ 0.95
PHLDA1-203ENST00000619060 P3H3Q8IVL6 736 aa21■□□□□ 0.95
PHLDA1-203ENST00000619060 ANP32AP39687 249 aaKnown RBP20.97■□□□□ 0.95
PHLDA1-203ENST00000619060 FBLN2P98095 1184 aa20.95■□□□□ 0.94
PHLDA1-203ENST00000619060 ABCC9O60706 1549 aa20.95■□□□□ 0.94
PHLDA1-203ENST00000619060 FKBP8Q14318 412 aa20.9■□□□□ 0.94
PHLDA1-203ENST00000619060 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
PHLDA1-203ENST00000619060 NEFMP07197 916 aa20.8■□□□□ 0.92
PHLDA1-203ENST00000619060 CSRNP3Q8WYN3 585 aa20.77■□□□□ 0.92
PHLDA1-203ENST00000619060 GLIPR1L2Q4G1C9 344 aa20.76■□□□□ 0.91
PHLDA1-203ENST00000619060 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
PHLDA1-203ENST00000619060 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
PHLDA1-203ENST00000619060 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
PHLDA1-203ENST00000619060 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
PHLDA1-203ENST00000619060 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
PHLDA1-203ENST00000619060 NBR1Q14596 966 aa20.63■□□□□ 0.89
PHLDA1-203ENST00000619060 HSP90AA1P07900 732 aaKnown RBP20.62■□□□□ 0.89
PHLDA1-203ENST00000619060 ANP32BQ92688 251 aaKnown RBP20.62■□□□□ 0.89
PHLDA1-203ENST00000619060 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
PHLDA1-203ENST00000619060 ARXQ96QS3 562 aa20.53■□□□□ 0.88
PHLDA1-203ENST00000619060 UPF2Q9HAU5 1272 aaKnown RBP20.52■□□□□ 0.88
PHLDA1-203ENST00000619060 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
PHLDA1-203ENST00000619060 IRX6P78412 446 aaPredicted RBP20.52■□□□□ 0.88
PHLDA1-203ENST00000619060 CCDC136Q96JN2 1154 aa20.51■□□□□ 0.87
PHLDA1-203ENST00000619060 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
PHLDA1-203ENST00000619060 CHIC2Q9UKJ5 165 aa20.48■□□□□ 0.87
PHLDA1-203ENST00000619060 MIER1Q8N108 512 aa20.46■□□□□ 0.87
PHLDA1-203ENST00000619060 TMC1Q8TDI8 760 aa20.45■□□□□ 0.86
PHLDA1-203ENST00000619060 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
PHLDA1-203ENST00000619060 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
PHLDA1-203ENST00000619060 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.86
PHLDA1-203ENST00000619060 MRS2Q9HD23 443 aa20.39■□□□□ 0.85
PHLDA1-203ENST00000619060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■□□□□ 8.9
PHLDA1-203ENST00000619060 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
PHLDA1-203ENST00000619060 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
PHLDA1-203ENST00000619060 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
PHLDA1-203ENST00000619060 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.34■□□□□ 0.85
PHLDA1-203ENST00000619060 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
PHLDA1-203ENST00000619060 SENP3-EIF4A1A0A087X0R7 540 aa20.23■□□□□ 0.83
PHLDA1-203ENST00000619060 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
PHLDA1-203ENST00000619060 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.82
PHLDA1-203ENST00000619060 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
PHLDA1-203ENST00000619060 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.81
PHLDA1-203ENST00000619060 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
PHLDA1-203ENST00000619060 MYH16Q9H6N6 1097 aa20.11■□□□□ 0.81
PHLDA1-203ENST00000619060 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms