RNA–Protein interactions for RNA: ENST00000398886.8

TTC29-202, Transcript of tetratricopeptide repeat domain 29, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC29, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC29-202ENST00000398886 NISCHQ9Y2I1 1504 aa35.63■■■■□ 3.29
TTC29-202ENST00000398886 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
TTC29-202ENST00000398886 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
TTC29-202ENST00000398886 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
TTC29-202ENST00000398886 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
TTC29-202ENST00000398886 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
TTC29-202ENST00000398886 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
TTC29-202ENST00000398886 ABCC9O60706 1549 aa28.65■■■□□ 2.18
TTC29-202ENST00000398886 NACADO15069 1562 aa28.61■■■□□ 2.17
TTC29-202ENST00000398886 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
TTC29-202ENST00000398886 SCRIBQ14160 1630 aa28.39■■■□□ 2.13
TTC29-202ENST00000398886 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
TTC29-202ENST00000398886 RSF1Q96T23 1441 aaPredicted RBP27.81■■■□□ 2.04
TTC29-202ENST00000398886 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
TTC29-202ENST00000398886 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
TTC29-202ENST00000398886 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
TTC29-202ENST00000398886 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
TTC29-202ENST00000398886 BAZ1AQ9NRL2 1556 aaPredicted RBP27.51■■□□□ 1.99
TTC29-202ENST00000398886 WIZO95785 1651 aa27.37■■□□□ 1.97
TTC29-202ENST00000398886 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
TTC29-202ENST00000398886 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
TTC29-202ENST00000398886 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
TTC29-202ENST00000398886 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
TTC29-202ENST00000398886 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
TTC29-202ENST00000398886 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.9
TTC29-202ENST00000398886 SMARCA2P51531 1590 aa26.87■■□□□ 1.89
TTC29-202ENST00000398886 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
TTC29-202ENST00000398886 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
TTC29-202ENST00000398886 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
TTC29-202ENST00000398886 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.85
TTC29-202ENST00000398886 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
TTC29-202ENST00000398886 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
TTC29-202ENST00000398886 HMGXB3Q12766 1538 aa26.42■■□□□ 1.82
TTC29-202ENST00000398886 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
TTC29-202ENST00000398886 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
TTC29-202ENST00000398886 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
TTC29-202ENST00000398886 EEA1Q15075 1411 aa26.18■■□□□ 1.78
TTC29-202ENST00000398886 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
TTC29-202ENST00000398886 SYNJ1O43426 1573 aa26.08■■□□□ 1.76
TTC29-202ENST00000398886 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
TTC29-202ENST00000398886 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
TTC29-202ENST00000398886 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
TTC29-202ENST00000398886 SOGA1O94964 1423 aa25.98■■□□□ 1.75
TTC29-202ENST00000398886 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
TTC29-202ENST00000398886 CFTRP13569 1480 aa25.92■■□□□ 1.74
TTC29-202ENST00000398886 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
TTC29-202ENST00000398886 TRIM26Q12899 539 aaPredicted RBP25.87■■□□□ 1.73
TTC29-202ENST00000398886 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
TTC29-202ENST00000398886 KIF21BO75037 1637 aa25.84■■□□□ 1.73
TTC29-202ENST00000398886 RUSC2Q8N2Y8 1516 aa25.84■■□□□ 1.73
TTC29-202ENST00000398886 TNIKQ9UKE5 1360 aa25.81■■□□□ 1.72
TTC29-202ENST00000398886 GOLGA3Q08378 1498 aa25.8■■□□□ 1.72
TTC29-202ENST00000398886 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
TTC29-202ENST00000398886 EHMT2Q96KQ7 1210 aa25.74■■□□□ 1.71
TTC29-202ENST00000398886 HRCP23327 699 aa25.71■■□□□ 1.71
TTC29-202ENST00000398886 CUX1P39880 1505 aa25.7■■□□□ 1.7
TTC29-202ENST00000398886 CEP162Q5TB80 1403 aa25.69■■□□□ 1.7
TTC29-202ENST00000398886 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
TTC29-202ENST00000398886 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
TTC29-202ENST00000398886 UBTFP17480 764 aaKnown RBP25.53■■□□□ 1.68
TTC29-202ENST00000398886 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
TTC29-202ENST00000398886 PRXQ9BXM0 1461 aa25.45■■□□□ 1.67
TTC29-202ENST00000398886 RAPGEF2Q9Y4G8 1499 aa25.45■■□□□ 1.67
TTC29-202ENST00000398886 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
TTC29-202ENST00000398886 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
TTC29-202ENST00000398886 CLIP1P30622 1438 aa25.36■■□□□ 1.65
TTC29-202ENST00000398886 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
TTC29-202ENST00000398886 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
TTC29-202ENST00000398886 VPS8Q8N3P4 1428 aa25.26■■□□□ 1.63
TTC29-202ENST00000398886 CUX2O14529 1486 aa25.24■■□□□ 1.63
TTC29-202ENST00000398886 NESP48681 1621 aa25.22■■□□□ 1.63
TTC29-202ENST00000398886 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
TTC29-202ENST00000398886 ZEB1P37275 1124 aaPredicted RBP25.2■■□□□ 1.62
TTC29-202ENST00000398886 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
TTC29-202ENST00000398886 PPARGC1BQ86YN6 1023 aaKnown RBP25.15■■□□□ 1.62
TTC29-202ENST00000398886 IGF1RP08069 1367 aa25.13■■□□□ 1.61
TTC29-202ENST00000398886 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
TTC29-202ENST00000398886 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
TTC29-202ENST00000398886 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
TTC29-202ENST00000398886 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
TTC29-202ENST00000398886 CUL7Q14999 1698 aa25.06■■□□□ 1.6
TTC29-202ENST00000398886 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
TTC29-202ENST00000398886 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
TTC29-202ENST00000398886 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
TTC29-202ENST00000398886 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
TTC29-202ENST00000398886 APLP2Q06481 763 aa24.96■■□□□ 1.59
TTC29-202ENST00000398886 ARHGAP35Q9NRY4 1499 aa24.95■■□□□ 1.58
TTC29-202ENST00000398886 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
TTC29-202ENST00000398886 CTTNBP2Q8WZ74 1663 aa24.91■■□□□ 1.58
TTC29-202ENST00000398886 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
TTC29-202ENST00000398886 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.57
TTC29-202ENST00000398886 TTBK1Q5TCY1 1321 aaPredicted RBP24.82■■□□□ 1.56
TTC29-202ENST00000398886 MAP3K1Q13233 1512 aa24.81■■□□□ 1.56
TTC29-202ENST00000398886 EFCAB5A4FU69 1503 aa24.8■■□□□ 1.56
TTC29-202ENST00000398886 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
TTC29-202ENST00000398886 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
TTC29-202ENST00000398886 PBRM1Q86U86 1689 aa24.73■■□□□ 1.55
TTC29-202ENST00000398886 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
TTC29-202ENST00000398886 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
TTC29-202ENST00000398886 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms