Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLP19338 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCLP19338 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NCLP19338 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.73■□□□□ 0.75
NCLP19338 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.73■□□□□ 0.75
NCLP19338 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.73■□□□□ 0.75
NCLP19338 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NCLP19338 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NCLP19338 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLP19338 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLP19338 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
NCLP19338 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.72■□□□□ 0.75
NCLP19338 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.72■□□□□ 0.75
NCLP19338 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLP19338 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NCLP19338 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLP19338 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.71■□□□□ 0.75
NCLP19338 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.71■□□□□ 0.75
NCLP19338 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NCLP19338 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.71■□□□□ 0.75
NCLP19338 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.71■□□□□ 0.75
NCLP19338 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NCLP19338 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.71■□□□□ 0.75
NCLP19338 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.71■□□□□ 0.75
NCLP19338 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.71■□□□□ 0.75
NCLP19338 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.71■□□□□ 0.75
NCLP19338 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms