RNA–Protein interactions for RNA: ENST00000336600.5

C6orf223-201, Transcript of chromosome 6 open reading frame 223, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C6orf223, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf223-201ENST00000336600 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
C6orf223-201ENST00000336600 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
C6orf223-201ENST00000336600 SHROOM4Q9ULL8 1493 aa28.41■■■□□ 2.14
C6orf223-201ENST00000336600 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
C6orf223-201ENST00000336600 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
C6orf223-201ENST00000336600 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
C6orf223-201ENST00000336600 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
C6orf223-201ENST00000336600 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
C6orf223-201ENST00000336600 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
C6orf223-201ENST00000336600 HRCP23327 699 aa26.12■■□□□ 1.77
C6orf223-201ENST00000336600 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
C6orf223-201ENST00000336600 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.74
C6orf223-201ENST00000336600 ABCC9O60706 1549 aa25.94■■□□□ 1.74
C6orf223-201ENST00000336600 CCDC180Q9P1Z9 1646 aa25.86■■□□□ 1.73
C6orf223-201ENST00000336600 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
C6orf223-201ENST00000336600 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
C6orf223-201ENST00000336600 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
C6orf223-201ENST00000336600 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
C6orf223-201ENST00000336600 PELP1Q8IZL8 1130 aaKnown RBP25.46■■□□□ 1.67
C6orf223-201ENST00000336600 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
C6orf223-201ENST00000336600 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
C6orf223-201ENST00000336600 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
C6orf223-201ENST00000336600 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
C6orf223-201ENST00000336600 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
C6orf223-201ENST00000336600 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
C6orf223-201ENST00000336600 TRIM26Q12899 539 aaPredicted RBP24.83■■□□□ 1.56
C6orf223-201ENST00000336600 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
C6orf223-201ENST00000336600 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
C6orf223-201ENST00000336600 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
C6orf223-201ENST00000336600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
C6orf223-201ENST00000336600 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
C6orf223-201ENST00000336600 NACADO15069 1562 aa24.46■■□□□ 1.51
C6orf223-201ENST00000336600 MYT1Q01538 1121 aa24.41■■□□□ 1.5
C6orf223-201ENST00000336600 NEUROD1Q13562 356 aa24.38■■□□□ 1.49
C6orf223-201ENST00000336600 WIZO95785 1651 aa24.37■■□□□ 1.49
C6orf223-201ENST00000336600 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
C6orf223-201ENST00000336600 ACIN1Q9UKV3 1341 aaKnown RBP24.26■■□□□ 1.47
C6orf223-201ENST00000336600 APLP2Q06481 763 aa24.24■■□□□ 1.47
C6orf223-201ENST00000336600 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
C6orf223-201ENST00000336600 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
C6orf223-201ENST00000336600 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
C6orf223-201ENST00000336600 ZEB1P37275 1124 aaPredicted RBP24.13■■□□□ 1.45
C6orf223-201ENST00000336600 ATP1B4Q9UN42 357 aaPredicted RBP24.11■■□□□ 1.45
C6orf223-201ENST00000336600 SOGA1O94964 1423 aa24.06■■□□□ 1.44
C6orf223-201ENST00000336600 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
C6orf223-201ENST00000336600 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
C6orf223-201ENST00000336600 ITGAEP38570 1179 aa24.02■■□□□ 1.44
C6orf223-201ENST00000336600 YTHDC1Q96MU7 727 aaKnown RBP23.91■■□□□ 1.42
C6orf223-201ENST00000336600 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
C6orf223-201ENST00000336600 CENPBP07199 599 aaPredicted RBP23.87■■□□□ 1.41
C6orf223-201ENST00000336600 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
C6orf223-201ENST00000336600 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
C6orf223-201ENST00000336600 DIEXFQ68CQ4 756 aaKnown RBP23.75■■□□□ 1.39
C6orf223-201ENST00000336600 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
C6orf223-201ENST00000336600 SMARCA4P51532 1647 aa23.74■■□□□ 1.39
C6orf223-201ENST00000336600 BAZ1BQ9UIG0 1483 aaKnown RBP23.7■■□□□ 1.38
C6orf223-201ENST00000336600 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
C6orf223-201ENST00000336600 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
C6orf223-201ENST00000336600 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
C6orf223-201ENST00000336600 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
C6orf223-201ENST00000336600 CLIP1P30622 1438 aa23.49■■□□□ 1.35
C6orf223-201ENST00000336600 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
C6orf223-201ENST00000336600 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
C6orf223-201ENST00000336600 GOLGA3Q08378 1498 aa23.43■■□□□ 1.34
C6orf223-201ENST00000336600 BICRAQ9NZM4 1560 aa23.42■■□□□ 1.34
C6orf223-201ENST00000336600 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.34
C6orf223-201ENST00000336600 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.33
C6orf223-201ENST00000336600 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
C6orf223-201ENST00000336600 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
C6orf223-201ENST00000336600 EEA1Q15075 1411 aa23.27■■□□□ 1.32
C6orf223-201ENST00000336600 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
C6orf223-201ENST00000336600 ZNF316A6NFI3 1004 aaPredicted RBP23.21■■□□□ 1.31
C6orf223-201ENST00000336600 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
C6orf223-201ENST00000336600 MIER1Q8N108 512 aa23.19■■□□□ 1.3
C6orf223-201ENST00000336600 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
C6orf223-201ENST00000336600 KIF27Q86VH2 1401 aa23.07■■□□□ 1.28
C6orf223-201ENST00000336600 CUX2O14529 1486 aa23.07■■□□□ 1.28
C6orf223-201ENST00000336600 ANP32EQ9BTT0 268 aa23.06■■□□□ 1.28
C6orf223-201ENST00000336600 HIRIP3Q9BW71 556 aaPredicted RBP23.05■■□□□ 1.28
C6orf223-201ENST00000336600 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
C6orf223-201ENST00000336600 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
C6orf223-201ENST00000336600 FBLN2P98095 1184 aa23.02■■□□□ 1.28
C6orf223-201ENST00000336600 CNGB1Q14028 1251 aaPredicted RBP22.98■■□□□ 1.27
C6orf223-201ENST00000336600 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
C6orf223-201ENST00000336600 TSHZ2Q9NRE2 1034 aa22.9■■□□□ 1.26
C6orf223-201ENST00000336600 CHIC2Q9UKJ5 165 aa22.9■■□□□ 1.26
C6orf223-201ENST00000336600 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
C6orf223-201ENST00000336600 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
C6orf223-201ENST00000336600 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
C6orf223-201ENST00000336600 BCANQ96GW7 911 aa22.87■■□□□ 1.25
C6orf223-201ENST00000336600 SIN3AQ96ST3 1273 aa22.86■■□□□ 1.25
C6orf223-201ENST00000336600 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
C6orf223-201ENST00000336600 TRIM52Q96A61 297 aa22.81■■□□□ 1.24
C6orf223-201ENST00000336600 NESP48681 1621 aa22.8■■□□□ 1.24
C6orf223-201ENST00000336600 CUX1P39880 1505 aa22.8■■□□□ 1.24
C6orf223-201ENST00000336600 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
C6orf223-201ENST00000336600 IGF1RP08069 1367 aa22.78■■□□□ 1.24
C6orf223-201ENST00000336600 KIF21BO75037 1637 aa22.78■■□□□ 1.24
C6orf223-201ENST00000336600 PRKCSHP14314 528 aaPredicted RBP22.76■■□□□ 1.23
C6orf223-201ENST00000336600 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 475 ms