RNA–Protein interactions for RNA: ENST00000288616.7

CABP1-201, Transcript of calcium binding protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CABP1, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CABP1-201ENST00000288616 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
CABP1-201ENST00000288616 ABCC9O60706 1549 aa40.19■■■■■ 4.02
CABP1-201ENST00000288616 CCDC180Q9P1Z9 1646 aa39.85■■■■□ 3.97
CABP1-201ENST00000288616 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.69
CABP1-201ENST00000288616 DNAJC5BQ9UF47 199 aa37.89■■■■□ 3.66
CABP1-201ENST00000288616 DCAF8L2P0C7V8 631 aa37.8■■■■□ 3.64
CABP1-201ENST00000288616 NACADO15069 1562 aa37.74■■■■□ 3.63
CABP1-201ENST00000288616 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
CABP1-201ENST00000288616 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
CABP1-201ENST00000288616 MYO15BQ96JP2 1530 aa37.09■■■■□ 3.53
CABP1-201ENST00000288616 BICRAQ9NZM4 1560 aa36.98■■■■□ 3.51
CABP1-201ENST00000288616 ZCCHC6Q5VYS8 1495 aaKnown RBP36.73■■■■□ 3.47
CABP1-201ENST00000288616 DCAF1Q9Y4B6 1507 aa36.57■■■■□ 3.44
CABP1-201ENST00000288616 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
CABP1-201ENST00000288616 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
CABP1-201ENST00000288616 CC2D2AQ9P2K1 1620 aa36.24■■■■□ 3.39
CABP1-201ENST00000288616 CECR2Q9BXF3 1484 aa36.18■■■■□ 3.38
CABP1-201ENST00000288616 EIF4G1Q04637 1599 aaKnown RBP36.09■■■■□ 3.37
CABP1-201ENST00000288616 DNAJC5Q9H3Z4 198 aa34.87■■■■□ 3.17
CABP1-201ENST00000288616 NCAPD3P42695 1498 aa34.86■■■■□ 3.17
CABP1-201ENST00000288616 ATAD2BQ9ULI0 1458 aa34.76■■■■□ 3.16
CABP1-201ENST00000288616 ERCC6Q03468 1493 aa34.7■■■■□ 3.15
CABP1-201ENST00000288616 SMARCA4P51532 1647 aa34.68■■■■□ 3.14
CABP1-201ENST00000288616 SMARCA2P51531 1590 aa34.62■■■■□ 3.13
CABP1-201ENST00000288616 CUX2O14529 1486 aa34.59■■■■□ 3.13
CABP1-201ENST00000288616 HMGXB3Q12766 1538 aa34.55■■■■□ 3.12
CABP1-201ENST00000288616 NESP48681 1621 aa34.47■■■■□ 3.11
CABP1-201ENST00000288616 BAZ1AQ9NRL2 1556 aaPredicted RBP34.46■■■■□ 3.11
CABP1-201ENST00000288616 BAZ1BQ9UIG0 1483 aaKnown RBP34.43■■■■□ 3.1
CABP1-201ENST00000288616 MROH2BQ7Z745 1585 aa34.26■■■■□ 3.07
CABP1-201ENST00000288616 PEG3Q9GZU2 1588 aa34.26■■■■□ 3.07
CABP1-201ENST00000288616 LAMC3Q9Y6N6 1575 aa34.09■■■■□ 3.05
CABP1-201ENST00000288616 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
CABP1-201ENST00000288616 KIF21AQ7Z4S6 1674 aa33.97■■■■□ 3.03
CABP1-201ENST00000288616 PDS5BQ9NTI5 1447 aa33.95■■■■□ 3.03
CABP1-201ENST00000288616 WIZO95785 1651 aa33.85■■■■□ 3.01
CABP1-201ENST00000288616 CADPSQ9ULU8 1353 aa33.84■■■■□ 3.01
CABP1-201ENST00000288616 MRC2Q9UBG0 1479 aa33.66■■■□□ 2.98
CABP1-201ENST00000288616 WDR62O43379 1518 aa33.55■■■□□ 2.96
CABP1-201ENST00000288616 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
CABP1-201ENST00000288616 RSF1Q96T23 1441 aaPredicted RBP33.47■■■□□ 2.95
CABP1-201ENST00000288616 FANCD2Q9BXW9 1451 aa33.46■■■□□ 2.95
CABP1-201ENST00000288616 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
CABP1-201ENST00000288616 CFTRP13569 1480 aa33.38■■■□□ 2.93
CABP1-201ENST00000288616 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
CABP1-201ENST00000288616 URB2Q14146 1524 aaKnown RBP33.2■■■□□ 2.9
CABP1-201ENST00000288616 OSCARQ8IYS5 282 aa33.09■■■□□ 2.89
CABP1-201ENST00000288616 CCDC88BA6NC98 1476 aa33.03■■■□□ 2.88
CABP1-201ENST00000288616 PRDM2Q13029 1718 aa33.01■■■□□ 2.87
CABP1-201ENST00000288616 ZNF608Q9ULD9 1512 aaPredicted RBP32.85■■■□□ 2.85
CABP1-201ENST00000288616 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
CABP1-201ENST00000288616 TOPBP1Q92547 1522 aa32.81■■■□□ 2.84
CABP1-201ENST00000288616 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
CABP1-201ENST00000288616 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
CABP1-201ENST00000288616 RIMBP3CA6NJZ7 1639 aa32.64■■■□□ 2.82
CABP1-201ENST00000288616 RIMBP3BA6NNM3 1639 aa32.64■■■□□ 2.82
CABP1-201ENST00000288616 RIMBP3Q9UFD9 1639 aa32.64■■■□□ 2.82
CABP1-201ENST00000288616 EIF4G3O43432 1585 aaKnown RBP32.61■■■□□ 2.81
CABP1-201ENST00000288616 AQRO60306 1485 aaKnown RBP eCLIP32.55■■■□□ 2.8
CABP1-201ENST00000288616 ARHGEF11O15085 1522 aa32.51■■■□□ 2.79
CABP1-201ENST00000288616 TARBP1Q13395 1621 aaKnown RBP32.49■■■□□ 2.79
CABP1-201ENST00000288616 FBLN2P98095 1184 aa32.47■■■□□ 2.79
CABP1-201ENST00000288616 POLA1P09884 1462 aaPredicted RBP32.45■■■□□ 2.79
CABP1-201ENST00000288616 CHD1O14646 1710 aa32.43■■■□□ 2.78
CABP1-201ENST00000288616 RAD54L2Q9Y4B4 1467 aa32.41■■■□□ 2.78
CABP1-201ENST00000288616 CYB5RLQ6IPT4 315 aa32.4■■■□□ 2.78
CABP1-201ENST00000288616 SOGA1O94964 1423 aa32.35■■■□□ 2.77
CABP1-201ENST00000288616 TDRD9Q8NDG6 1382 aaKnown RBP32.34■■■□□ 2.77
CABP1-201ENST00000288616 FGD5Q6ZNL6 1462 aa32.25■■■□□ 2.75
CABP1-201ENST00000288616 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
CABP1-201ENST00000288616 ARAP1Q96P48 1450 aa32.18■■■□□ 2.74
CABP1-201ENST00000288616 CUX1P39880 1505 aa32.18■■■□□ 2.74
CABP1-201ENST00000288616 CHMP7Q8WUX9 453 aaPredicted RBP32.13■■■□□ 2.73
CABP1-201ENST00000288616 TRHP20396 242 aaPredicted RBP32.12■■■□□ 2.73
CABP1-201ENST00000288616 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
CABP1-201ENST00000288616 GRIN2BQ13224 1484 aa32.04■■■□□ 2.72
CABP1-201ENST00000288616 SUPT5HO00267 1087 aaKnown RBP32.04■■■□□ 2.72
CABP1-201ENST00000288616 MAGI1Q96QZ7 1491 aaPredicted RBP32.03■■■□□ 2.72
CABP1-201ENST00000288616 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
CABP1-201ENST00000288616 SYNJ1O43426 1573 aa31.99■■■□□ 2.71
CABP1-201ENST00000288616 SYNJ2O15056 1496 aa31.94■■■□□ 2.7
CABP1-201ENST00000288616 GAPVD1Q14C86 1478 aa31.93■■■□□ 2.7
CABP1-201ENST00000288616 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
CABP1-201ENST00000288616 ABCA10Q8WWZ4 1543 aa31.82■■■□□ 2.69
CABP1-201ENST00000288616 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
CABP1-201ENST00000288616 WRNQ14191 1432 aaPredicted RBP eCLIP31.69■■■□□ 2.66
CABP1-201ENST00000288616 GRIN2AQ12879 1464 aa31.63■■■□□ 2.65
CABP1-201ENST00000288616 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
CABP1-201ENST00000288616 BIVM-ERCC5R4GMW8 1640 aa31.58■■■□□ 2.65
CABP1-201ENST00000288616 ADAMTS12P58397 1594 aa31.57■■■□□ 2.64
CABP1-201ENST00000288616 ERCC6L2Q5T890 1561 aa31.57■■■□□ 2.64
CABP1-201ENST00000288616 CEP170Q5SW79 1584 aa31.53■■■□□ 2.64
CABP1-201ENST00000288616 NUP160Q12769 1436 aa31.5■■■□□ 2.63
CABP1-201ENST00000288616 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
CABP1-201ENST00000288616 ERICH3Q5RHP9 1530 aa31.41■■■□□ 2.62
CABP1-201ENST00000288616 SHROOM2Q13796 1616 aa31.36■■■□□ 2.61
CABP1-201ENST00000288616 AEBP2Q6ZN18 517 aaPredicted RBP31.3■■■□□ 2.6
CABP1-201ENST00000288616 PRG4Q92954 1404 aaPredicted RBP31.29■■■□□ 2.6
CABP1-201ENST00000288616 JPH4Q96JJ6 628 aa31.28■■■□□ 2.6
CABP1-201ENST00000288616 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms