RNA–Protein interactions for RNA: ENST00000564057.1

COTL1-203, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 5 BASIC

Gene COTL1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-203ENST00000564057 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
COTL1-203ENST00000564057 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
COTL1-203ENST00000564057 ABCC9O60706 1549 aa33.23■■■□□ 2.91
COTL1-203ENST00000564057 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
COTL1-203ENST00000564057 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
COTL1-203ENST00000564057 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
COTL1-203ENST00000564057 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
COTL1-203ENST00000564057 NACADO15069 1562 aa32.42■■■□□ 2.78
COTL1-203ENST00000564057 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.76
COTL1-203ENST00000564057 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
COTL1-203ENST00000564057 SCRIBQ14160 1630 aa31.83■■■□□ 2.69
COTL1-203ENST00000564057 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
COTL1-203ENST00000564057 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
COTL1-203ENST00000564057 BICRAQ9NZM4 1560 aa31.2■■■□□ 2.59
COTL1-203ENST00000564057 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
COTL1-203ENST00000564057 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
COTL1-203ENST00000564057 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
COTL1-203ENST00000564057 MROH2BQ7Z745 1585 aa30.51■■■□□ 2.48
COTL1-203ENST00000564057 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
COTL1-203ENST00000564057 SMARCA4P51532 1647 aa30.46■■■□□ 2.47
COTL1-203ENST00000564057 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
COTL1-203ENST00000564057 WIZO95785 1651 aa30.24■■■□□ 2.43
COTL1-203ENST00000564057 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
COTL1-203ENST00000564057 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
COTL1-203ENST00000564057 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
COTL1-203ENST00000564057 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
COTL1-203ENST00000564057 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
COTL1-203ENST00000564057 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
COTL1-203ENST00000564057 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
COTL1-203ENST00000564057 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
COTL1-203ENST00000564057 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
COTL1-203ENST00000564057 CCDC88BA6NC98 1476 aa29.64■■■□□ 2.34
COTL1-203ENST00000564057 CADPSQ9ULU8 1353 aa29.17■■■□□ 2.26
COTL1-203ENST00000564057 CFTRP13569 1480 aa29.13■■■□□ 2.25
COTL1-203ENST00000564057 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
COTL1-203ENST00000564057 NESP48681 1621 aa29■■■□□ 2.23
COTL1-203ENST00000564057 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
COTL1-203ENST00000564057 PRDM2Q13029 1718 aa28.9■■■□□ 2.22
COTL1-203ENST00000564057 TRIM41Q8WV44 630 aa28.89■■■□□ 2.21
COTL1-203ENST00000564057 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
COTL1-203ENST00000564057 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
COTL1-203ENST00000564057 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
COTL1-203ENST00000564057 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
COTL1-203ENST00000564057 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
COTL1-203ENST00000564057 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
COTL1-203ENST00000564057 ERCC6Q03468 1493 aa28.6■■■□□ 2.17
COTL1-203ENST00000564057 SYNJ1O43426 1573 aa28.59■■■□□ 2.17
COTL1-203ENST00000564057 CUX1P39880 1505 aa28.56■■■□□ 2.16
COTL1-203ENST00000564057 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
COTL1-203ENST00000564057 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
COTL1-203ENST00000564057 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
COTL1-203ENST00000564057 URB2Q14146 1524 aaKnown RBP28.45■■■□□ 2.14
COTL1-203ENST00000564057 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
COTL1-203ENST00000564057 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
COTL1-203ENST00000564057 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
COTL1-203ENST00000564057 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
COTL1-203ENST00000564057 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
COTL1-203ENST00000564057 SOGA1O94964 1423 aa28.25■■■□□ 2.11
COTL1-203ENST00000564057 WDR62O43379 1518 aa28.25■■■□□ 2.11
COTL1-203ENST00000564057 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
COTL1-203ENST00000564057 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
COTL1-203ENST00000564057 EEA1Q15075 1411 aa28.15■■■□□ 2.1
COTL1-203ENST00000564057 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
COTL1-203ENST00000564057 CUX2O14529 1486 aa28.12■■■□□ 2.09
COTL1-203ENST00000564057 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
COTL1-203ENST00000564057 CSRNP3Q8WYN3 585 aa28.1■■■□□ 2.09
COTL1-203ENST00000564057 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.09
COTL1-203ENST00000564057 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
COTL1-203ENST00000564057 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
COTL1-203ENST00000564057 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
COTL1-203ENST00000564057 LOC105371045A0A1W2PR82 267 aa27.97■■■□□ 2.07
COTL1-203ENST00000564057 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
COTL1-203ENST00000564057 WDR97A6NE52 1622 aa27.93■■■□□ 2.06
COTL1-203ENST00000564057 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
COTL1-203ENST00000564057 IGF1RP08069 1367 aa27.89■■■□□ 2.05
COTL1-203ENST00000564057 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.053e-8■■■■■ 35
COTL1-203ENST00000564057 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
COTL1-203ENST00000564057 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
COTL1-203ENST00000564057 CARMIL1Q5VZK9 1371 aa27.77■■■□□ 2.04
COTL1-203ENST00000564057 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
COTL1-203ENST00000564057 ERICH3Q5RHP9 1530 aa27.75■■■□□ 2.03
COTL1-203ENST00000564057 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
COTL1-203ENST00000564057 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
COTL1-203ENST00000564057 KIF21BO75037 1637 aa27.73■■■□□ 2.03
COTL1-203ENST00000564057 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
COTL1-203ENST00000564057 EIF4G3O43432 1585 aaKnown RBP27.72■■■□□ 2.03
COTL1-203ENST00000564057 PBRM1Q86U86 1689 aa27.7■■■□□ 2.02
COTL1-203ENST00000564057 RAPGEF2Q9Y4G8 1499 aa27.68■■■□□ 2.02
COTL1-203ENST00000564057 CUL7Q14999 1698 aa27.66■■■□□ 2.02
COTL1-203ENST00000564057 FHAD1B1AJZ9 1412 aa27.59■■■□□ 2.01
COTL1-203ENST00000564057 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
COTL1-203ENST00000564057 TNIKQ9UKE5 1360 aa27.57■■■□□ 2
COTL1-203ENST00000564057 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
COTL1-203ENST00000564057 FBLN2P98095 1184 aa27.52■■■□□ 2
COTL1-203ENST00000564057 CHMP7Q8WUX9 453 aaPredicted RBP27.52■■■□□ 2
COTL1-203ENST00000564057 ADAMTS12P58397 1594 aa27.52■■■□□ 2
COTL1-203ENST00000564057 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
COTL1-203ENST00000564057 SYNJ2O15056 1496 aa27.44■■□□□ 1.98
COTL1-203ENST00000564057 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
COTL1-203ENST00000564057 CEP162Q5TB80 1403 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms