RNA–Protein interactions for RNA: ENST00000435041.2

UBE2J1-201, Transcript of ubiquitin conjugating enzyme E2 J1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2J1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2J1-201ENST00000435041 NISCHQ9Y2I1 1504 aa29.02■■■□□ 2.24
UBE2J1-201ENST00000435041 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
UBE2J1-201ENST00000435041 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
UBE2J1-201ENST00000435041 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
UBE2J1-201ENST00000435041 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
UBE2J1-201ENST00000435041 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.61
UBE2J1-201ENST00000435041 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
UBE2J1-201ENST00000435041 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
UBE2J1-201ENST00000435041 TRIM41Q8WV44 630 aa24.64■■□□□ 1.53
UBE2J1-201ENST00000435041 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
UBE2J1-201ENST00000435041 HRCP23327 699 aa24.56■■□□□ 1.52
UBE2J1-201ENST00000435041 TTBK1Q5TCY1 1321 aaPredicted RBP24.31■■□□□ 1.48
UBE2J1-201ENST00000435041 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
UBE2J1-201ENST00000435041 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
UBE2J1-201ENST00000435041 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
UBE2J1-201ENST00000435041 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
UBE2J1-201ENST00000435041 CCER1Q8TC90 406 aaPredicted RBP24.02■■□□□ 1.44
UBE2J1-201ENST00000435041 APLP2Q06481 763 aa23.93■■□□□ 1.42
UBE2J1-201ENST00000435041 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
UBE2J1-201ENST00000435041 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
UBE2J1-201ENST00000435041 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
UBE2J1-201ENST00000435041 RANGAP1P46060 587 aaPredicted RBP23.83■■□□□ 1.41
UBE2J1-201ENST00000435041 ABCC9O60706 1549 aa23.74■■□□□ 1.39
UBE2J1-201ENST00000435041 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
UBE2J1-201ENST00000435041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
UBE2J1-201ENST00000435041 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
UBE2J1-201ENST00000435041 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
UBE2J1-201ENST00000435041 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
UBE2J1-201ENST00000435041 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
UBE2J1-201ENST00000435041 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
UBE2J1-201ENST00000435041 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
UBE2J1-201ENST00000435041 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
UBE2J1-201ENST00000435041 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
UBE2J1-201ENST00000435041 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
UBE2J1-201ENST00000435041 CSRNP3Q8WYN3 585 aa23.03■■□□□ 1.28
UBE2J1-201ENST00000435041 ITGAEP38570 1179 aa23.02■■□□□ 1.28
UBE2J1-201ENST00000435041 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
UBE2J1-201ENST00000435041 GTF3C3Q9Y5Q9 886 aa22.81■■□□□ 1.24
UBE2J1-201ENST00000435041 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
UBE2J1-201ENST00000435041 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
UBE2J1-201ENST00000435041 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
UBE2J1-201ENST00000435041 NACADO15069 1562 aa22.73■■□□□ 1.23
UBE2J1-201ENST00000435041 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
UBE2J1-201ENST00000435041 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
UBE2J1-201ENST00000435041 CEP162Q5TB80 1403 aa22.58■■□□□ 1.2
UBE2J1-201ENST00000435041 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
UBE2J1-201ENST00000435041 NEFLP07196 543 aa22.52■■□□□ 1.2
UBE2J1-201ENST00000435041 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
UBE2J1-201ENST00000435041 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
UBE2J1-201ENST00000435041 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
UBE2J1-201ENST00000435041 CLIP1P30622 1438 aa22.4■■□□□ 1.18
UBE2J1-201ENST00000435041 SOGA1O94964 1423 aa22.4■■□□□ 1.18
UBE2J1-201ENST00000435041 EEA1Q15075 1411 aa22.4■■□□□ 1.18
UBE2J1-201ENST00000435041 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
UBE2J1-201ENST00000435041 WIZO95785 1651 aa22.38■■□□□ 1.17
UBE2J1-201ENST00000435041 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
UBE2J1-201ENST00000435041 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
UBE2J1-201ENST00000435041 MYT1Q01538 1121 aa22.34■■□□□ 1.17
UBE2J1-201ENST00000435041 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
UBE2J1-201ENST00000435041 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
UBE2J1-201ENST00000435041 MIER1Q8N108 512 aa22.29■■□□□ 1.16
UBE2J1-201ENST00000435041 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
UBE2J1-201ENST00000435041 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
UBE2J1-201ENST00000435041 BCANQ96GW7 911 aa22.16■■□□□ 1.14
UBE2J1-201ENST00000435041 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
UBE2J1-201ENST00000435041 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
UBE2J1-201ENST00000435041 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
UBE2J1-201ENST00000435041 TRIM52Q96A61 297 aa22.08■■□□□ 1.13
UBE2J1-201ENST00000435041 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.12
UBE2J1-201ENST00000435041 ANP32CO43423 234 aa22.04■■□□□ 1.12
UBE2J1-201ENST00000435041 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
UBE2J1-201ENST00000435041 DDX10Q13206 875 aaKnown RBP21.99■■□□□ 1.11
UBE2J1-201ENST00000435041 ARID3CA6NKF2 412 aa21.95■■□□□ 1.1
UBE2J1-201ENST00000435041 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
UBE2J1-201ENST00000435041 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
UBE2J1-201ENST00000435041 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
UBE2J1-201ENST00000435041 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
UBE2J1-201ENST00000435041 KANK4Q5T7N3 995 aaPredicted RBP21.84■■□□□ 1.09
UBE2J1-201ENST00000435041 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
UBE2J1-201ENST00000435041 FKBP8Q14318 412 aa21.8■■□□□ 1.08
UBE2J1-201ENST00000435041 SMARCA2P51531 1590 aa21.8■■□□□ 1.08
UBE2J1-201ENST00000435041 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
UBE2J1-201ENST00000435041 ZNF326Q5BKZ1 582 aaKnown RBP21.77■■□□□ 1.07
UBE2J1-201ENST00000435041 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
UBE2J1-201ENST00000435041 CHIC2Q9UKJ5 165 aa21.74■■□□□ 1.07
UBE2J1-201ENST00000435041 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
UBE2J1-201ENST00000435041 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
UBE2J1-201ENST00000435041 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
UBE2J1-201ENST00000435041 ATAD2BQ9ULI0 1458 aa21.69■■□□□ 1.06
UBE2J1-201ENST00000435041 FBLN2P98095 1184 aa21.67■■□□□ 1.06
UBE2J1-201ENST00000435041 HNRNPUQ00839 825 aaKnown RBP eCLIP21.64■■□□□ 1.05
UBE2J1-201ENST00000435041 CUX2O14529 1486 aa21.64■■□□□ 1.05
UBE2J1-201ENST00000435041 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
UBE2J1-201ENST00000435041 ZNF777Q9ULD5 760 aaPredicted RBP21.59■■□□□ 1.05
UBE2J1-201ENST00000435041 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
UBE2J1-201ENST00000435041 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.04
UBE2J1-201ENST00000435041 MYT1LQ9UL68 1186 aa21.52■■□□□ 1.04
UBE2J1-201ENST00000435041 SUPT16HQ9Y5B9 1047 aaKnown RBP21.52■■□□□ 1.04
UBE2J1-201ENST00000435041 FAM9BQ8IZU0 186 aa21.51■■□□□ 1.03
UBE2J1-201ENST00000435041 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms