RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-208ENST00000478576 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
GFM1-208ENST00000478576 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
GFM1-208ENST00000478576 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
GFM1-208ENST00000478576 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
GFM1-208ENST00000478576 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
GFM1-208ENST00000478576 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.1
GFM1-208ENST00000478576 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
GFM1-208ENST00000478576 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
GFM1-208ENST00000478576 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
GFM1-208ENST00000478576 ABCC9O60706 1549 aa27.4■■□□□ 1.98
GFM1-208ENST00000478576 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
GFM1-208ENST00000478576 NACADO15069 1562 aa27.12■■□□□ 1.93
GFM1-208ENST00000478576 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
GFM1-208ENST00000478576 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
GFM1-208ENST00000478576 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
GFM1-208ENST00000478576 HRCP23327 699 aa26.6■■□□□ 1.85
GFM1-208ENST00000478576 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
GFM1-208ENST00000478576 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
GFM1-208ENST00000478576 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
GFM1-208ENST00000478576 WIZO95785 1651 aa26.45■■□□□ 1.82
GFM1-208ENST00000478576 BAZ1AQ9NRL2 1556 aaPredicted RBP26.4■■□□□ 1.82
GFM1-208ENST00000478576 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
GFM1-208ENST00000478576 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
GFM1-208ENST00000478576 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
GFM1-208ENST00000478576 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
GFM1-208ENST00000478576 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
GFM1-208ENST00000478576 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.77
GFM1-208ENST00000478576 FAM9AQ8IZU1 332 aaPredicted RBP25.99■■□□□ 1.75
GFM1-208ENST00000478576 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
GFM1-208ENST00000478576 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
GFM1-208ENST00000478576 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.74
GFM1-208ENST00000478576 PPARGC1BQ86YN6 1023 aaKnown RBP25.83■■□□□ 1.73
GFM1-208ENST00000478576 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
GFM1-208ENST00000478576 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
GFM1-208ENST00000478576 ZEB1P37275 1124 aaPredicted RBP25.67■■□□□ 1.7
GFM1-208ENST00000478576 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
GFM1-208ENST00000478576 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.68
GFM1-208ENST00000478576 EEA1Q15075 1411 aa25.57■■□□□ 1.68
GFM1-208ENST00000478576 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
GFM1-208ENST00000478576 SOGA1O94964 1423 aa25.47■■□□□ 1.67
GFM1-208ENST00000478576 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
GFM1-208ENST00000478576 TNIKQ9UKE5 1360 aa25.43■■□□□ 1.66
GFM1-208ENST00000478576 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
GFM1-208ENST00000478576 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
GFM1-208ENST00000478576 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
GFM1-208ENST00000478576 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
GFM1-208ENST00000478576 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
GFM1-208ENST00000478576 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
GFM1-208ENST00000478576 KIF21BO75037 1637 aa25.23■■□□□ 1.63
GFM1-208ENST00000478576 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
GFM1-208ENST00000478576 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
GFM1-208ENST00000478576 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
GFM1-208ENST00000478576 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
GFM1-208ENST00000478576 BIVM-ERCC5R4GMW8 1640 aa25.05■■□□□ 1.6
GFM1-208ENST00000478576 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
GFM1-208ENST00000478576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.97■■□□□ 1.59
GFM1-208ENST00000478576 CCER1Q8TC90 406 aaPredicted RBP24.95■■□□□ 1.59
GFM1-208ENST00000478576 CLIP1P30622 1438 aa24.92■■□□□ 1.58
GFM1-208ENST00000478576 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.58
GFM1-208ENST00000478576 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
GFM1-208ENST00000478576 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
GFM1-208ENST00000478576 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
GFM1-208ENST00000478576 CFTRP13569 1480 aa24.79■■□□□ 1.56
GFM1-208ENST00000478576 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
GFM1-208ENST00000478576 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
GFM1-208ENST00000478576 CUX1P39880 1505 aa24.78■■□□□ 1.56
GFM1-208ENST00000478576 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
GFM1-208ENST00000478576 APLP2Q06481 763 aa24.59■■□□□ 1.53
GFM1-208ENST00000478576 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
GFM1-208ENST00000478576 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
GFM1-208ENST00000478576 DIEXFQ68CQ4 756 aaKnown RBP24.46■■□□□ 1.51
GFM1-208ENST00000478576 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
GFM1-208ENST00000478576 RANGAP1P46060 587 aaPredicted RBP24.4■■□□□ 1.5
GFM1-208ENST00000478576 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
GFM1-208ENST00000478576 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
GFM1-208ENST00000478576 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
GFM1-208ENST00000478576 CUX2O14529 1486 aa24.36■■□□□ 1.49
GFM1-208ENST00000478576 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
GFM1-208ENST00000478576 IGF1RP08069 1367 aa24.35■■□□□ 1.49
GFM1-208ENST00000478576 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
GFM1-208ENST00000478576 RRBP1Q9P2E9 1410 aaKnown RBP24.32■■□□□ 1.48
GFM1-208ENST00000478576 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
GFM1-208ENST00000478576 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
GFM1-208ENST00000478576 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
GFM1-208ENST00000478576 ACIN1Q9UKV3 1341 aaKnown RBP24.24■■□□□ 1.47
GFM1-208ENST00000478576 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
GFM1-208ENST00000478576 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
GFM1-208ENST00000478576 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
GFM1-208ENST00000478576 DHX57Q6P158 1386 aaKnown RBP24.17■■□□□ 1.46
GFM1-208ENST00000478576 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
GFM1-208ENST00000478576 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.45
GFM1-208ENST00000478576 NEUROD1Q13562 356 aa24.14■■□□□ 1.45
GFM1-208ENST00000478576 CCNB3Q8WWL7 1395 aa24.13■■□□□ 1.45
GFM1-208ENST00000478576 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
GFM1-208ENST00000478576 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
GFM1-208ENST00000478576 CFAP43Q8NDM7 1665 aa24.06■■□□□ 1.44
GFM1-208ENST00000478576 CUL7Q14999 1698 aa24.06■■□□□ 1.44
GFM1-208ENST00000478576 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
GFM1-208ENST00000478576 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
GFM1-208ENST00000478576 LRRC9Q6ZRR7 1453 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms